Paramisgurnus dabryanus (large-scale loach): 135720319
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Entry
135720319 CDS
T10799
Symbol
polr2a
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03020
RNA polymerase
pdab03420
Nucleotide excision repair
Brite
Enzymes [BR:
pdab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135720319 (polr2a)
Transcription machinery [BR:
pdab03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
135720319 (polr2a)
DNA repair and recombination proteins [BR:
pdab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
135720319 (polr2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
135720319
NCBI-ProteinID:
XP_065098439
LinkDB
All DBs
Position
Unknown
AA seq
1965 aa
AA seq
DB search
MHGPPSSDSACPLRLIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQ
GVIERSGRCQTCAGNMTECPGHFGHIELAKPVFHVGFITKIMKVLRCVCFFCSKLLVDAN
NPKIKDILTKSKGQPRKRLTHVYDLCKGKNICEGGEEMDNKFGVEQQETEEDITKEKGHG
GCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEEDVILGMEPKY
ARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQSGAAAHV
IAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSIKQRLKGKEGRVRGNLMGKRVDFS
ARTVITPDPNLQIDQVGVPRSIAANMTFPEIVTPFNIDRLQELVRRGNSQYPGAKYIIRD
NGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIIVFNRQPTLHKMSMMGHRVRILPWSTF
RLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTL
TAVRKFTKRDVFLERGEVMNLLMFLSTWDGKMPQPAILKPRPLWTGKQIFSLIIPGHINV
IRTHSTHPDEEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGH
DITRLFYSNIQTVVNNWLLIEGHSIGIGDSIADKATYQDIQNTIKKAKQDVIEVIEKAHN
NELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVAGSKGSKINIS
QVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMG
GREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGEAVE
FQNMATLKPSNKAFEKKFKFEYTNERALRRTLLEEVVKDVMTNAHVQSSLEREFEKMRED
REILRAIFPTGDSKVVLPCNLARMIWNAQKIFRINPRTPTDLNPVRVVEGVQELSKKLVI
VNGDDLLSRQAQENATLLFNIHLRSTLCSRRMTEEFRLSTEAFDWLLGEIETKFNQSIAH
PGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKRPKTPSLTVF
LLGQAARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQNTVVSEDQEWVNVYYEMPDF
DVTRISPWLLRIELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIM
NSDENKFQEDEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIII
TEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALEREL
YHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGINRQDTGPLMKCSFEETVDVLMEA
SSHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGISVAGPTGMF
FGSAPSPMSGMSPAMTPWNTGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYS
PAWSPTPGSPGSPGPASPYIPSPGALSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSYS
PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP
SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPS
YSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPT
SPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKY
SPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSPAISPDDSDEENN
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaccgccttccagcgacagcgcatgcccattgcgcctcatcaagagagtgcaa
ttcggcgtcctcagccctgatgaacttaaacggatgtccgttactgaagggggtattaaa
tacccagagactacagagggaggacgccctaaactgggtggactcatggacccaagacaa
ggggtcattgagagatcaggcagatgccaaacatgtgcaggtaacatgactgaatgccct
ggtcattttggtcacattgagctggccaagccagtctttcatgttggcttcatcacaaaa
atcatgaaggtcctccgctgcgtctgcttcttctgttctaagctgcttgtggatgcgaac
aatccaaaaatcaaagacattctgactaagtcgaaggggcagccacgaaagcgcctgacc
cacgtctatgacctctgtaaagggaaaaacatctgtgagggtggagaggagatggacaac
aagtttggtgtggagcagcaggagactgaagaagacatcaccaaagaaaagggtcacgga
ggttgtggcaggtaccagccacggatccgtcgctctggactggagctgtatgctgagtgg
aagcacgtcaatgaagactctcaagagaagaagattcttctcagccctgaacgcgtgcat
gagatcttcaaacgcatttccgacgaagaggacgtaatcctgggaatggagcccaaatat
gcccgcccagagtggatgattgtcacagttttgcctgtgccccctttatccgtgaggccg
gctgtggtcatgcaaggctctgctagaaatcaggatgacttgacgcataagttggctgac
attgtaaagatcaataaccagctaaggcgaaatgagcagagtggtgccgcagctcacgtt
atagcagaggatgtcaagctgcttcagtttcatgtggccaccatggtggacaatgaactt
ccaggtctacccagagcaatgcaaaagtctggccgcccgctaaaatccatcaagcaaagg
cttaaggggaaggaaggacgtgtcagaggtaatctgatgggcaagcgtgtagacttttct
gcccgaactgtcatcacgcctgaccccaacctgcagatcgaccaagtgggagttcctcgt
tccattgctgcaaacatgaccttccctgagattgtcacaccctttaacattgacagactt
caagagcttgtgaggagaggtaacagtcagtaccctggagccaaatatatcatccgtgat
aacggggacagaattgacctgcgattccacccaaaaccaagtgaccttcaccttcagata
ggatacaaagtcgaacggcacatgtgtgacggagacattattgtgttcaacagacagcca
acgctgcacaaaatgtctatgatgggccacagagtgcgaattttgccttggtctacattt
cgacttaaccttagtgtaaccaccccatacaatgctgactttgacggtgatgagatgaac
ttgcacttgccacagtctctggagacccgcgctgagatccaggagctggctatggtgcct
cgtatgattgtcacaccacagtccaacaggcctgtcatgggcattgtacaggacacactc
acagcagtgcgcaagttcacaaaaagagatgtgttcttagaaaggggtgaggtgatgaac
ctcctgatgtttctttccacatgggatggtaaaatgccacagcctgccatcctgaagcct
cggccactctggacaggcaaacagatcttcagcttgatcatcccagggcacattaacgtc
atccgcacacacagcactcatcctgatgaagaggatagcggtccttataaacacatttcc
cctggagacaccaaggtaattgtggagaatggggagctgatcatggggatcctgtgtaag
aaatctctcggaacttctgcgggctcactggtccatatctcataccttgagatgggccac
gacatcacacgactcttctattccaacatccagactgttgtcaacaactggcttcttatt
gagggtcactctattggtattggagattccattgccgataaggcgacatatcaggacatt
caaaacacaattaagaaagccaaacaagatgtgatagaggtcattgagaaagcccacaat
aatgagttggagcccaccccaggtaacacactgagacagacctttgagaaccaggtcaac
cgtattctgaacgatgctcgtgacaagactggatcctctgcccagaaatcactgtctgag
tacaacaacttcaaatctatggtggtggctggttcaaaaggctctaaaattaacatttca
caggttattgctgtggtagggcagcagaacgttgagggtaagcgaatcccttttggtttc
aagcaccgcactttgcctcacttcattaaagacgactacggtccagagagtagaggcttt
gtggaaaactcctatttggccggtctgacaccaactgagttcttctttcacgccatggga
ggaagagagggtttgatcgacacagctgtcaaaactgctgagaccggttacattcagcgt
cgtctgatcaagtctatggagtctgtcatggtcaagtatgatgctacagtcagaaactcc
attaaccaggttgtccaactccgatatggagaggacgggctggcaggagaggctgtggag
tttcagaatatggctactcttaaaccatccaacaaagcctttgagaagaagttcaagttt
gaatacaccaatgagcgagctctccgccgcactctgctggaggaggtggtgaaagatgtg
atgaccaatgctcacgtccagagttcactagagagggagtttgagaagatgagggaagac
cgagagatcctgagggcaattttccccacaggagacagcaaggtggtactgccgtgcaat
ttggctcgaatgatttggaatgcacagaagattttccggatcaatcctcgaacaccgact
gatctaaacccagtacgagttgtggaaggagttcaggagttgagtaagaagcttgttatt
gtgaatggtgatgacctgttaagcaggcaggcacaggagaacgccactttactcttcaat
atccacctgcgttccaccctttgctccagacgaatgactgaggagttccgccttagcaca
gaggctttcgattggctcctgggagaaatcgagaccaaatttaaccaatccatcgctcat
cctggagagatggttggtgccctggctgctcagtctctaggagagcctgccactcagatg
accctgaacacattccactacgccggtgtgtccgccaaaaacgtcaccctcggtgtgcct
cgtctcaaagagttgatcaacatctccaagcgacccaagaccccctccctgacagtgttt
cttctgggtcaagcggcccgtgatgcagagagggccaaagatatcctgtgtcgcttggag
cacaccacccttcgtaaggtcacagccaacacggccatttattacgaccccaatccacag
aacaccgttgtgtctgaggatcaagagtgggtgaacgtgtactacgagatgcccgacttt
gacgtgacccgtatttcaccctggctgttgcgtattgaacttgaccgcaaacacatgact
gaccgtaagctgaccatggagcagattgctgagaagatcaatgctggttttggtgatgac
cttaactgcatcttcaatgatgacaatgctgagaagctggtgctgcgaatccgcatcatg
aatagtgacgagaacaagtttcaagaggatgaggaggtagtcgataagatggatgatgat
gtcttcctccgttgcattgaatccaacatgctgacggacatgactctgcaaggcattgag
cagatcagcaaggtgtacatgcatcttccacagacagacaacaaaaagaaaatcatcatc
acagaagatggtgagtttaaagccctgcaggagtggattctggaaaccgatggcgtgagc
ctcatgagagtcctcagtgagaaggacgtggaccctgtcaggaccacctctaatgacatt
gtggagattttcactgtccttggtattgaggcagtgcgaaaggctctggagagagagttg
taccatgtcatctcttttgatggttcctatgtaaactaccgccatctggccttgctgtgc
gacacaatgacctgtagagggcatcttatggccataacacgtcatggcatcaacagacag
gatactggaccactcatgaagtgctcctttgaagagacggtcgatgtgttgatggaagcg
tcatctcatggtgaaagtgacccaatgaaaggagtgtctgagaacatcatgttgggacag
cttgctcctgcaggcactggatgctttgacctgttgttggatgctgagaagtgcaagtat
ggtatggagatccctaccaatatccctggcatcagtgttgcaggacccacgggtatgttc
tttggctccgccccaagcccaatgagtggcatgtccccagccatgactccttggaacacc
ggagccactcctgcatatggtgcttggtcacccagtgttggaagtggaatgacacctggg
gcagcaggattctctcccagtgctgcatctgatgccagtggtttctcacctggctactct
cctgcctggtcacccactcctggttctccaggatcacctggaccagccagcccttacatc
ccctcaccaggagccttgtctcccaattactctccaacttctcctgcctacgagcctcgt
tctccgggtggttacaccccgcagagtcccggctactccccaacttcaccatcatactct
ccgacttctccatcttactctccgaccagcccgaactacagccccacatctccgtcctat
tcgcccacatcaccctcctactcccccacgtctccgtcttattcgcccacatctccgagc
tactctccaacgtcaccctcttactccccgacttcgccatcgtactctccaacctcacca
tcgtactcgcccacatcacccagttacagcccaacttcaccaagctacagcccaacatcc
cccagctacagtcccacatccccatcctattctccaacctctccgtcttattccccaacc
tctccgtcctactctcctacctctcccagctactccccaacctctccatcctactctcca
acatctccaagctacagccctacttcacctaactacacgcccacctcgcccagttactcc
ccaacttctccatcgtacagccccacctcaccctcctactctcccacctctcccaattac
accccgaccagtcccaactactcccccacgtctccttcatactcccccacttcaccatcc
tactctccctctagtccacgctacaccccgcagtctcccacctacaccccaagttcaccg
tcttacagcccgagctctccgtcatattcccctacgtctccaaaatacactcccacctct
ccttcctacagtccaagctccccggaatacaccccaacgtcccccaaatactcacccact
tcgccgaagtactctcccacttcaccaaaatacagccccacctctccgacctactctcca
actacacccaagtacagtcccacctctccgacttactcaccaacgtctcccacctacacc
ccaaccagccccaaatattcccccacgtctccgacctactctccaacttctccaaaatac
tcaccgacgtctcctacctactctccaactagccccaagggctccacctacagccccacg
tctcctggatatagccccacctctccaacttacagcccagccatcagtcctgatgacagc
gatgaggaaaataactaa
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integrated database retrieval system
