Paramisgurnus dabryanus (large-scale loach): 135720381
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Entry
135720381 CDS
T10799
Symbol
tnrc6ba
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135720381 (tnrc6ba)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Gene silencing
piRNA pathway
135720381 (tnrc6ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
135720381
NCBI-ProteinID:
XP_065098544
LinkDB
All DBs
Position
1:56377458..56401143
Genome browser
AA seq
1981 aa
AA seq
DB search
MEDKKRKKEDKRKRETSQKVVEQKNKVPELTKPPQSPATSNSVSPSPGPVPSSTPSAATP
AASALPQGGNNAKRPAVANGQPSPSTQNSQRYMPREVPPRFRCQQDHKVLLKRGQPPLSS
MLLGGGNSGGDSPNESVASASDPSQGPVGPAAPSLPHASSSSSIAASTSNYANSMWGASS
GSQPLSQGREKVIVDRSDLKEWPSIAAGDGLKSGDTAGTGGADGSGILNCSASWGERHPQ
QQAKVVGGGNGGRKVVNSDSPSPPTSSSSPSECMQSGSVWASSSHELIGGNAVAAGSLPP
ISKAAPLAGNSDGSLGVSCGIPGANFTPNANPSAWPALVQDGAGAVETEGGSSSLQSSSL
SASNPLSVNQTSHQHQLHQMQSRDREPSCGEWGGTALEPGAGPKNTGVAEGAEMDSGSTG
GGDGSASSTSSTSSSLWRAQSFPANSKTGASRTESWEDGAGGSSISAEGGNAWGFTGKDE
RSDMTGASAWGTGSGSQTSGVSQGAWGGDHTLVGEWGTSGGAGGVSNQGREDRSSSNSSS
SGGSVGNPTTSSSTPSTTTRAWDNQKGVGDVGAGESTEWGGQGSRGGGGTSSSSGGGNSR
SGNQRHGQHRFHQPPNPEVTLQNLLSRSDLDPKVLSNTGWGQTQIRQNVAWDLEGRGPSA
PSGGANSSSAMIAPALSQPYSTGSTGPSTTTDPSSSTLQGAPLNANLNSNSMLGPPAVSP
GEGWDNNSSSLHTRGPPPPGVNIQNLGVSQSGGGGGNSSGGQGKPSGGWGASELQGKGWD
NEGHEWRDRRAGSVSGGWGDFQTQGTPASGWGDSQEEKGSESWKEMSRGDAGNWGQRSSD
WGDNEAKSSSGGWGDGKGSGVTSGDPEGSTWGNWDEGAPRGAWGAGGSRVSGDMGGKSHQ
GWGGKMHPSQMPNSQSASQKGPAQQQQQSQPQQCQSLDTGAIQGGWGRQGGPSAQNQSSG
WTSGPIPQLSSVPGDSSEPSGWEEPSPQSISRKMEIDDGTSAWGDPTSYSSKGVNLWDKN
SAPSGQAQSASHQQGPPSIQQQPPGRVPTGPVNRDIPLTHSSSKGPGIAPSGWGNSGSPS
SPCVDNGTAAWGKPTEAPTGWGEPDDAGKVSGWGDPSSNPVKSGTKSMQEGWGEGEGSVS
ASRHSSWEEEDESGGVWNSAGSQGSSSSYNSGGWAAKKGNKGAMKGAGDSWMNPMTRQFS
NMGILGEDPNGRTLDLAPGPPQDKKMEGEKRGMGLNEYNGEMRKVGRGGGAGGVFRSPGS
KEVGACDPGPYYDKTGGQLFGSGGGMPQSRHQPGVPPINPSVRAQVPHQFLSPQVPGSVL
KPPPSGGVGGVGGGIFPPQLSPQHIAMLSSIYPPHIQFQLACQLLLQPQQQQQQQQHLLQ
NQRKFPPNIRQQPDPHQLARIMAVLQQQRQQQQQQQVGSAVGSSKLSPSHLGAGGPKMPM
SDPLSHPGLAGSVIDMHQKTQGTYSGFGPGVGLSGLELGPMVGGPPGPKDSGAQQSRFKW
MMEGHSPAPSPPDSTLHKNGPIAAPLKMGGGSPYSQYEMLGGDGLGVPPQGPSDHWHRSP
GNKMGTKTGTSSWPPEFQPGVPWKGIPSVDPESDPYMTPGSMLSSSMSSLNDTEHQLLRD
NTESNPTLNTLLPSPGAWPYSASESPHNNAHNTAKYTDYKPSWPPEPIGHNKPWKTNRNS
SHLPRPPPGLTHQKQPSASPWTGGAPRLGRGWGGSGGGQETRFGPGSAWSDGGASRGSCW
LLLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALIRYSTRQEAAKAQSALHMCVLG
NTTILAEFVSEEEVARYFAHSQAGAGGSNSGASGTGAAVSGPAGVAGSSGAGAVGTISTG
NAERERAGSSTAGGSNNNSGTGPSGSTWQSLDGTGSSPDPASAQGAGLSIFAQWSSNGVG
GSVGSNAGSVDPGRAGLWGGMTAGYTGSSLWGSPAMEDRHQLSSPAALLPGDLLGGGADS
I
NT seq
5946 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaaaaaggaagacaaaaggaaacgggaaacctcacagaaggtt
gtagagcaaaaaaataaagtgccagaattgaccaagcctccacagtctcctgccacctcc
aactcagtttcccccagccctggccccgtcccctcatcaaccccatccgctgccaccccg
gctgctagtgccctccctcagggtgggaacaatgctaagcggccggcggtggccaacgga
cagccctcccccagcactcagaactctcagcgctacatgccccgtgaagtgccccctcga
ttccgttgccagcaggaccataaagtgctactgaagaggggccagccaccactgtcctcc
atgctgctggggggaggcaacagcgggggagatagccccaatgaatcagtggcttctgcc
tcagatccaagccagggccctgtgggtccagctgctccctcactgccccatgcgtcatcc
tcctcatcaatcgctgcttctacttcaaattatgcaaattccatgtggggggccagctct
ggcagccagcccctctctcagggcagggaaaaggtgatagtggaccggtcagacctaaaa
gaatggcccagtattgctgctggagatgggttgaaatcgggggatacagcaggtactgga
ggtgcagatggtagtgggattctgaactgcagcgcctcatggggtgagaggcatcctcag
cagcaagctaaagttgtgggaggagggaatggaggcaggaaagtagttaattctgacagc
ccctccccacccacatcctccagttcacccagtgaatgtatgcagtctggtagtgtttgg
gcttcatcctcccatgaacttatagggggaaatgcagtagcagcaggatcattgcccccc
atttccaaagctgcccctcttgcagggaactctgatggctcccttggtgttagctgtggg
attccaggtgccaattttacccctaatgccaatccctctgcttggccagccctggtacag
gatggggctggggcagttgaaacagaggggggctcctcttctctccaaagctcatccttg
tctgccagcaaccctctttctgtgaatcaaacctctcatcagcaccaacttcaccaaatg
caatccagagacagagagccatcctgcggtgagtggggtggcacagcactggaaccagga
gcaggaccaaaaaacacaggagtggcagagggggctgagatggactctggaagcacaggt
ggaggggatggctctgcttcctcaacctcctccaccagctcgtcattgtggagagctcag
tctttccctgcaaactccaaaactggtgcctcaaggactgaatcttgggaggatggagca
gggggaagctccatatctgctgaaggaggaaatgcgtggggtttcactggcaaggatgag
cgaagtgatatgacaggagcaagtgcatggggaacaggaagtggtagtcagacctccggg
gtatctcagggagcatggggtggggaccatacgttggttggggaatgggggacttcaggt
ggagctgggggtgtcagcaatcaaggtagggaagatagatcaagcagtaacagcagcagc
agtggtggcagtgttggcaacccaacaacttcctcctccacaccttcaactacgacaaga
gcttgggacaatcagaaaggagttggagatgttggggcaggagagtcaaccgagtgggga
ggtcagggtagcagaggtgggggaggtacatcatcttctagtggtggaggaaactctaga
agtggcaatcagcgccatggccagcaccgttttcatcagcctcccaaccctgaagtgacc
ttacagaatctgcttagccggtctgacctggatcctaaagtgctctccaacactggctgg
ggtcagacacaaatccgtcagaatgtggcttgggatttggagggacgaggaccatcagca
ccatcaggtggagctaattcctcttctgcaatgattgcacctgcccttagtcaaccatac
tctactggttctactggtccatctacaactactgatccatcttcctccacactgcaaggt
gcacctctaaatgccaacttgaactcaaactccatgcttggaccaccagctgtctcacct
ggtgaaggctgggacaacaacagcagctctttgcacacccgaggccctccaccccctggt
gtcaatatccaaaaccttggcgtctcacaatctggaggtggaggaggtaattcatctggt
gggcaaggcaagccatctgggggctggggagcgtcagaactccaaggtaaaggttgggac
aacgaaggacatgagtggcgagatcgcagagcagggagtgtatcaggtgggtggggagat
tttcaaacacagggtactccagcaagtggttggggagacagtcaggaagagaaaggatca
gagagttggaaagaaatgagcaggggggatgcaggcaattggggacagagaagtagtgac
tggggggataacgaggccaaatcatccagtggaggttggggagatgggaagggtagtgga
gttactagtggggacccagagggaagtacatggggtaattgggatgagggagctcctaga
ggggcttggggagctggaggttcaagggtgagtggagacatgggtggcaagtctcaccaa
ggttggggtgggaaaatgcacccttcacaaatgccaaacagccaatcagcctcacagaaa
ggcccggcacaacagcaacaacaatcacagccccagcagtgtcagtcattggacacaggg
gccatacaagggggctggggaagacaagggggtccttcagcccagaaccaaagttcaggt
tggacttcagggcccataccgcaactttccagtgttcctggagatagctcagagcccagt
ggttgggaggagccttctccgcagtccattagcagaaagatggaaatagatgatggaact
tctgcctggggtgaccccaccagctacagcagcaaaggtgtcaacttgtgggataagaat
agcgccccatctggccaggcacaatcagcctcccatcagcaggggcctccatccattcaa
cagcagccgcctggaagagtgccaacaggccctgtgaatagagacatacctcttacacat
tcatccagcaaggggccaggaatagcgccatctgggtggggcaatagtggctctccttcc
agtccatgtgtggacaatggtactgcagcttggggcaagcccactgaagcgcccactggt
tggggtgaacctgatgatgctggcaaagtgtcaggttggggagacccctcctccaatcca
gtgaagtctggtacaaagtctatgcaagaaggttggggtgaaggtgagggttcagtcagt
gcttcacgtcactccagctgggaggaagaggatgagagtggtggtgtttggaacagtgct
ggttcccaaggcagcagctcttcctacaattctggaggctgggcagccaagaagggcaac
aagggtgccatgaagggtgcaggagactcttggatgaatcctatgacaagacagttctca
aacatggggattctgggagaggatcccaatggtcgtaccctggatctggcccctggtcct
ccgcaggataaaaagatggaaggagaaaagcgcggcatgggtttgaatgagtacaatgga
gagatgcgtaaagtaggacgtggagggggagcaggaggagtcttccgttcacctggttcc
aaagaggtgggggcttgtgatcctgggccttactatgacaagacgggtggtcagttgttt
ggtagcggaggtgggatgccacagtccaggcaccaaccaggggtgccacccatcaaccca
tctgtacgagcgcaagtgcctcatcagttcctgtcacctcaggtgccaggctctgtgctg
aagcctcctcccagtggaggtgtgggaggtgttgggggaggcatctttcctccacagctt
tctccacagcacattgccatgctcagcagcatctatccccctcatattcagttccagctg
gcttgtcaactgctactgcaaccgcagcaacaacaacaacagcagcagcatctgctgcag
aaccagcgcaagttccctccaaatatacgccaacaaccagacccccatcagcttgccaga
attatggctgttcttcagcagcagagacagcaacaacagcaacagcaggtgggaagtgca
gtgggcagctccaaactctctccttctcaccttggtgcaggtggcccaaagatgcccatg
tcggaccccttgtcacatcctggtttggcaggctctgtaatagacatgcatcagaaaaca
cagggcacttattctgggtttggacctggtgtgggcctatctggtcttgaactgggtcca
atggttggcggcccacctgggcctaaagacagtggagcccaacagtctcgttttaaatgg
atgatggaaggtcactcaccagccccctccccaccagatagcactctccataaaaatggt
cctattgctgctcctctcaaaatgggaggtggttctccatattcccagtatgagatgctg
ggaggtgatggtttgggtgtgcctccacaagggccatcggatcactggcatagaagtcct
ggaaacaaaatgggcacaaagactggcacatccagctggcctccagaatttcaaccagga
gtgccttggaaaggtattccgagtgtagacccagaatctgacccctatatgactcctgga
agtatgctgagctcatcgatgtcaagccttaatgacacagagcaccaattgctaagagat
aacacagaatcaaatcccaccctcaacaccttgctgccttcacctggtgcctggccctac
agtgcctcagagagcccccacaacaatgcacacaacacagctaagtacacagactacaag
cccagctggccacctgagcccataggacacaacaagccttggaagaccaatcggaacagc
tctcatctgccacgcccacctcctggactgacccatcagaaacagccctcggcgtctccc
tggacaggaggagccccacgattgggcagaggatggggaggatcaggaggcggccaggaa
accagatttggccctggttctgcgtggagtgatggaggagcctctagaggaagctgctgg
ctattgttaagcaatcttacccctcagatcgatggctccaccttacggacaatatgtatg
cagcacggaccgttgttgacctttcacctcggtctaacccaaggtagtgctctgattcgc
tacagtactcgccaagaagcagccaaagcccagagcgcacttcatatgtgtgttttaggt
aacaccacaatcctggccgagtttgtgagcgaggaggaggttgctcgttattttgcacat
tcccaggctggagctggtggaagcaacagcggagcaagcggaaccggtgccgctgtctcc
gggccagcgggtgttgcggggtcatcgggggcgggtgcagtgggtaccatcagcactggg
aatgcggaaagagaacgggctggaagttcgacagcaggaggaagtaacaacaacagtggg
actgggccctcgggctccacctggcagagtttggacggtacaggcagctccccagaccca
gcctctgcccagggagcaggcttaagcattttcgctcagtggagcagcaatggtgttggc
ggtagtgtgggcagcaacgcggggagtgttgatcctggcagagcggggttgtggggcggc
atgaccgcagggtatacgggcagcagtttatgggggtctccggctatggaagatcggcac
caattgagcagccctgcagcactgttacctggagacctgctagggggaggggcagactct
atctga
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