Paramisgurnus dabryanus (large-scale loach): 135720398
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Entry
135720398 CDS
T10799
Symbol
mgrn1a
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04120
Ubiquitin mediated proteolysis
pdab04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135720398 (mgrn1a)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
135720398 (mgrn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135720398 (mgrn1a)
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135720398 (mgrn1a)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135720398 (mgrn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
135720398
NCBI-ProteinID:
XP_065098568
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All DBs
Position
1:56819481..56830443
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AA seq
548 aa
AA seq
DB search
MGSIISRRIGGVEDIDIQANSAYRYPPKSGNYFTSHFFMGGEKFDTPHPEGYLFGENMDL
NYLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDSTPDDTGDPRVLYGV
EFCFDTDARVAITLYCQAFEEFANGMALYSPKSPSMVSETVHYKRGINQQFSLPSFKIDF
TKWKPEELNFDLDRGVFPLVIQAIVDDDDVTGHAHVLLAAFERHVDGSFSVKPLKQKQIV
DRVSYLLQEIYGIENRNNQETKSTEDENSDNSSECVVCLSDMRDTLILPCRHLCLCNTCA
DTLRYQANNCPICRLPFRALLQIRAVRKKTAKRVTFSPVLPQSSDHTEHSNADNIPPGYE
PISLLEALNGVQPMSPSIPSAPLYEEIQFSGEMGDPLTGRQQSMDTASIEGKGSKSPDSS
ARSPSSPIQEEEDEERLSELSDAQPRAVLPCCLTPTETTLEGVSAKPGFPNSGSESRSLG
VSVSEILQDCHSERSSLSRTESDPSADLALPGSSGSTESLKSQSTNSSSQPLLCLPSTLH
MEDERLTP
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgataattagccggagaattggtggagttgaagacatcgatattcaagcgaat
tcggcgtacagatatcctccaaaatcaggaaattattttacaagtcatttcttcatggga
ggagagaagtttgatacgccacatcctgagggatacctttttggtgaaaacatggattta
aattacctaggcaacagacctgtgcagtttccctatgtgacccctgctccacatgaacct
gtgaagacattgagaagtttggtgaacattaggaaggattctttacgacttgtcaggtat
aaggatgattctgacagcacaccggatgacacaggagatcctagagtcctttacggagtt
gaattctgctttgatactgatgctagagtggctattacactgtactgtcaggcatttgag
gagtttgccaatggaatggcattatacagccccaagagcccttcaatggtgtctgaaacg
gtccattataagagaggaataaatcaacaattttctctgccatccttcaagattgatttc
accaaatggaagcctgaggagctgaactttgatctggatagaggtgttttccctttggtg
atccaggcaatagtggatgatgatgatgtcacaggccatgcacatgttctcttggcagct
tttgaaaggcacgtcgatggcagtttctcagtgaaacccttaaaacagaagcaaatagtg
gatcgtgtgagctatctgctgcaggagatttacggcattgaaaacaggaacaatcaggaa
acaaagtccacagaggatgagaacagcgacaacagcagcgagtgtgtggtctgtttatca
gacatgcgtgacacgctcatccttccctgcaggcacctgtgtctgtgcaatacctgtgcc
gacacactgcgttaccaggccaacaactgccctatctgcagactcccattcagggctctg
ctccagattcgagctgtgagaaagaaaacggcaaaaagagttactttcagcccggtgctg
ccccagagctctgaccatactgagcattcgaatgctgacaatatcccacctggctatgag
cctatttctcttctggaggccctgaatggggtgcagccgatgtctccttccatcccatca
gcacctctgtatgaggagatccagttttcgggggagatgggagatccgctgaccgggcgg
cagcagagcatggacactgcatcaattgagggcaaaggcagcaagtcaccagatagttct
gcacgttctccatcatctcccatacaagaggaagaggatgaagagaggctgtcggagctc
tcagatgcccagcctcgggcagttctgccatgctgcctgactcccactgagacaactcta
gagggcgtgtccgccaaacctggcttcccaaattcaggttcagagagcagatcgttgggt
gtgtcagtgagtgaaatcctacaagactgccacagtgagcgcagcagtttgagccgtaca
gaaagtgacccttcagcagatttggccctgcctgggtcatcagggtccaccgaaagcctg
aagagtcagagcaccaacagctccagtcagcccttgctctgcctccccagcacactgcac
atggaagatgagcgtctcactccataa
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