Paramisgurnus dabryanus (large-scale loach): 135720534
Help
Entry
135720534 CDS
T10799
Symbol
drosha
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135720534 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135720534 (drosha)
03009 Ribosome biogenesis [BR:
pdab03009
]
135720534 (drosha)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135720534 (drosha)
Enzymes [BR:
pdab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
135720534 (drosha)
Messenger RNA biogenesis [BR:
pdab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
135720534 (drosha)
Ribosome biogenesis [BR:
pdab03009
]
Eukaryotic type
90S particles
RNase
135720534 (drosha)
Prokaryotic type
rRNA processing factors
135720534 (drosha)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
135720534 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Motif
Other DBs
NCBI-GeneID:
135720534
NCBI-ProteinID:
XP_065098774
LinkDB
All DBs
Position
1:complement(60631001..60656410)
Genome browser
AA seq
1289 aa
AA seq
DB search
MSYHGRGSPRGRPAAPGQMYRSDTPRYHYDMSTTPAPVYNHPGTGGYMPPPPDLMPFHFP
VPQQGSNAMPQCPMRPPMFPEAPPFPPPPLHGSGSSTSVPPQNSYPYMMPSVTPLPLTRM
PPPPLPPMSYPPSYPMSYPPQTQVPPPPTFNPTYAQPGGSFKPEHTTRQPAHYKSDSCPR
SPERLRHHEGHRHGGHSYGAYGGRYNTEFGSEKRDRGRSPEHRRSGSPRYKGDYDRGSGS
QRHRSREHYRHRDERGSPSSDRHRKHARTRSRSRERKRRRVEPEKERRTDGTASSREKTV
SVSRSRDSEETTSSECHVEEKVEEEMLKPVWIRCTHAESYYSNDPMDQVGDSTVVGTSKL
RDLYERFEEELGRRQECAKSSRPKWEPPKTKLDQDEDESSSESDCESDEGGSSCSSSSDS
EVFDVIAEIKRKKAHPDRLHEELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEPVK
QCRPMNNNAGKLFHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFSHTPLTNIPLCR
VIRFNIDYTIHFIEEMSPENYCVKGLELFSSYLFKDILELYDWNLTGPDDETPQGCQRFH
FMPRFVRFLPDGGKEVLSMHQVLLYLLRSSKPLVPAEEIANMLQWEELEWQKYAEECKGM
IVTNPGMKPSSVRIDQLDREQFNSSVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKL
RHLLANSPKVKQIDKQKLTQREEALQKIRQKNTMRREVTVELSSQGFWRTGIRSDICQHA
MMLPVLTHHIRYHRCLMHLDKLIGYIFKERCLLQLAMTHPSHHLNFGMNPDHARNSLSNC
GIRQPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNERLEFLGDAVVEFLT
SVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAM
ANCFEALIGAVYLEGGLEEAKQLFGRLLFNIDDLREVWLNYPPHPLQIQEPLTDRQLIES
SPVLQKLTSFEDSIGVLFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATE
YLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITNDKTKRPVALRTKTLADL
LESFIAALYIDKDLVYVHAFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPD
IPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQ
KRFIERKYRQELREMRQERERQERDSDEG
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcatggtcgcggaagtccgagggggagaccagcagcgccagggcagatgtac
cgttcagatactccgcggtatcactatgatatgtcgaccacccctgctcctgtatacaac
catcctggcactggcggctacatgcctcctcctcctgacctcatgccttttcactttcct
gtgccacaacaaggctcaaatgccatgccccagtgtcccatgcgacctcccatgttccca
gaggctccgccttttcctccgccacctcttcatggatcgggctcatctacttcagtgccg
cctcagaactcttacccctacatgatgccctcggtcaccccgctgcccctcacgcggatg
ccacccccaccgttaccccccatgtcctacccgccttcatatccgatgagttatcctcca
caaacccaagtccctcctccacccacctttaatcccacatacgctcagcctgggggctca
tttaaacccgagcacaccacccggcagccggcgcattacaagtcggacagctgcccccga
tcgcccgagaggctccgtcaccatgagggccaccgtcacggtgggcacagctacggagct
tacggaggccggtacaacacagaatttggatcagagaagagggacagggggcgcagtcct
gagcacagacggtcaggcagcccaaggtataaaggagactatgacagggggagcgggtca
cagaggcatcgcagcagagagcattatcgccatagagacgagagaggttctccctcctca
gacagacacaggaagcacgctcgaactcgctccagaagtcgggagaggaaacgccggcgc
gtggagccggagaaagagaggaggacagatggaacagcgagcagtagagagaaaactgtg
agcgtcagcaggagcagagactcagaagagaccacgtccagtgaatgccatgtggaggag
aaagtagaggaggagatgctgaaacctgtttggatccgctgcacgcatgctgaaagctac
tactccaatgatcccatggaccaagtgggtgactctactgttgtgggtaccagcaagttg
agagatctgtatgagcggtttgaagaggaactcggccggagacaagaatgtgccaaatcc
agccgaccaaaatgggagccacccaaaaccaaactggaccaggatgaagatgagagctcc
agtgagtcagattgtgagtctgatgaaggtggtagcagttgctctagcagctcagactct
gaggtgtttgatgtcatcgctgagataaagaggaagaaagctcatcctgatcgcctgcat
gaggaactttggtacaatgacccaggacagatgaatgatggtcccttgtgtaagtgcagc
gctaaagccagacgtactggaatccgtcacagtatttatcctggtgaagagccggtgaaa
cagtgtcggccaatgaacaacaacgctggcaaattattccactacagaatcactgtgtct
ccacccaccaacttcctgacggacagacccacagtgattgaatatgacgatcatgagtac
ctgtttgaaggtttctcgctgttctctcacacacctctcaccaatattcctttgtgtcga
gttattcgttttaacattgattacaccattcactttatagaagagatgtcacctgagaac
tactgtgtgaaaggtctggagctcttctcctcgtacctcttcaaagacatcctggagctc
tatgactggaaccttacaggtcctgatgatgagacacctcaaggttgtcagagattccat
ttcatgccacggttcgttcgtttccttccagatggtggtaaggaggtgctatccatgcac
caggtgttgctttatctgctgcgcagcagtaagccgttggttcccgcagaggagattgct
aacatgctacagtgggaggaactggagtggcagaaatatgctgaggagtgcaagggcatg
atcgtcaccaaccctggcatgaaaccaagttcagtgaggatcgaccagttagatcgtgag
cagtttaactccagtgttatcactttccccatcatcgttcatttcgggattcggcctgct
cagctcagctacgctggagacccgcaatatcaaaagttgtggaagagttacgtgaaattg
cgccacctgctggccaacagcccaaaggtgaaacagattgacaaacagaagttaacccaa
agagaggaagctctgcagaagatccgtcagaagaatacaatgagacgagaggtcaccgtt
gagctcagcagtcagggattctggagaaccggtatccgatccgatatctgccagcacgcc
atgatgctgccggttcttacccatcacatccggtaccatcggtgtctgatgcatctggac
aaactgatcggatacatatttaaagagcgctgcctgctgcagttggccatgactcacccc
agccatcatctgaatttcggaatgaatcccgatcatgcccggaattctctgtccaactgc
ggcatacggcagcccaagtatggagaccggaaagtgcatcacatgtacatgaggaagaag
ggaataaacactttaatcaatattatgtcacgtctggggcaggacgacccatctccctcc
agaattaatcacaatgagcgcttggagtttcttggtgatgcagtcgttgagtttctgacc
agcgtacatctctattatctgtttccaagcctggaggagggtggactcgccacatatcgt
acagcgatcgttcaaaaccaacatcttgctatgcttgctaagaaactggagttagatcgg
tttatgctgtacgctcacgggccggatctgtgcagagaatcagacctcagacatgcaatg
gccaactgctttgaagctctgataggggcagtttatcttgaaggaggcttggaggaagcc
aagcagctgtttggcagactcttgtttaacattgacgacttgagggaggtttggctcaac
tatccacctcatcctttacagattcaagagcctctgacagacagacagttgatcgagtcg
tctccagtcctgcagaaactcaccagttttgaggattctattggagtgctgttcactcat
gtgcgtctcttggcccgagcctttactctgaggacagtgggcttcaatcacctcaccctt
ggccacaatcagcggatggagtttttgggagattctatcatgcagttggtggcaaccgaa
tatctgttcatccattttccagatcatcacgaaggacatcttacccttctgcgcagctct
ttggtgaataatcgcactcaggcgaaggttgcagaagagttgggcatgcaggaatacgcc
atcaccaatgacaaaaccaaacgacctgttgccctacggaccaaaactctggctgatttg
ttagagtcatttattgcagctctgtacattgacaaagacctggtctacgtacacgcgttt
atgaatgtctgcttctttccacgactcaaggagtttattttgaatcaggactggaatgat
cctaaatctcagcttcagcagtgctgtctcactttgagaacagagggtaaagagcctgat
attcctctctataagacacttcagacagtgggaccgtctcacgcccggacctacacagtg
gccgtgtactttaaaggtgaacgaatcggctgcggaaaagggcccagcattcaacaggca
gagatgggtgcagctatggatgctctggagaaatataactttcctcagatggctcatcag
aaacgtttcatcgagcggaagtaccgacaagagctgagagagatgagacaagaacgagag
cgacaggaaagagacagtgatgaaggctaa
DBGET
integrated database retrieval system
