Paramisgurnus dabryanus (large-scale loach): 135721016
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Entry
135721016 CDS
T10799
Name
(RefSeq) uncharacterized protein isoform X1
KO
K16469
rootletin
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pdab03037
]
135721016
Cilium and associated proteins [BR:
pdab03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
135721016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
135721016
NCBI-ProteinID:
XP_065099184
LinkDB
All DBs
Position
24:191515..207278
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AA seq
2007 aa
AA seq
DB search
MSACENSSESRLESVIQRLEESVLSEEKRLTVQGSSPDHPVTGLPARVREIVSRNLSDTS
AGMSSVLSVQEENRVLQSELSRVEDLLAHSRAERDELAIKYSAISERLEQALCLEGGDEG
RDSPESRSFAQQNVDLRRRLDEEQAAYKRKLTAYQEGQQRQAQLVQKLQAKVLQYKKKCG
DLEQTLLEKSTELDKHKLNGRCDFNGHRRDEDEPSSDLESALIRLEEEQQRSSGLSAVNA
MLREQLEQAGLANEALSQDIRRLTADWTKAREELEQRESDWRREEESFHSYFSSEHSRLL
ALWRQVVGFRRYVCELKSATERDLSDMRNELACAGQSVQLQCVSACAALRSREDGSTLVL
ERETGHRLQLEQQLRETLTEMMSLQAKSDSDRTELNTRLADAVREVERLKARIDDREQKI
TTLSSELQVQSSHEESEVNILRTQTAALQNTLRHVTQLLFSDCDRLDGDTEEAMLPLLRS
SSPSRSSSSPHIIPDTCLSALRSAVTNRQLQLQELRERLQSAQSSVQQLRRQLGEVESGR
RDAELRMQALQAERDEAHRERETIVRERDRIKKERDTLSSVKASVDKAAQAAQTQVQLLQ
LECEKLQLAVTSAQRERDREREEKNATILERDRARTEIDRIQQLREESETRASSLRVELS
AVRESLQQGTIEKQLMDTENKQLADALNRCESSHAEISLSLSKLQSEESSLRDSLAKMSN
INESLAQDKSDLNSIIIQLEEDKNLLASQRREADQEKLTIRDELVRSEQDRLELESVRLT
LHQSLQESELARVGLEAELQSLRADRSKLQDKITQLVGELSSLEAELGAIRGEGDRQSTA
LEEAGRGRAELARERAGLLVQLTASERENATLTEEIAAFRSEREALETSLFEVQQQMNQI
EARREHLEAENQHLRLRTDSMTAELKRLRTDKETVLSQSEREKDMLRDALTTAQQEAQRS
LRTALSEHQEELERLTNQKEALRCSLEAEHEVALRQVREQMEEQMSRLEKERDELQEELR
SLQRDRNQRLLQAETDKQQALSMKEAEKAVLSEKVCSLQAELSTAALELDRVNREMVLLK
DQERAAVTALNAELQEMRSHLEDTGSLHGRELCRLQENCADQQTRADAALRELEECRFLL
SASEESHDTAKRELLEMDKRFCQIRDIGEGHRRDGAELRRAISDVTKERDALSQSNNQLR
EALRVAESERISVKRACEESEQKLSLLEETLASVQKEASDLRSCLREVERSRLEARRELQ
ELRRQVKVLDAEREQTGKQMAELQTRLSGEDQKDEERARELISLKQKLTDTETTRNALQK
ELCSLQRRLSESELCWRSRERDLTSHLQEARGCEKKLQDEARNLALRAQTASDASVQMQL
HLSEAEGRLAATEAELSRAEAARRDLEFRLCSLQSALTRTLGIGSSGRSGSRGRSPAGSS
PSSMMSLSRHRSVSPLRCSLSPHKDVAGNITPDNTVILRPLSPERTDAPLPVALPELDPE
TLRSGLRDFLQELREAQRERDEARGQLGSLQRELEEVTSERDSAQHRVLQLHNTLQECQE
DKRAVDGKLSSAQALLHQHEEQQRRSERERRVLNDKIKELERVLLNADTERKRVEEQCSK
RRAGEARLEAERHRLREALEAAEGHGTRVELGRRSLEGELQRLRLSLAERETELLSANER
HENILKQVAEGEGRLSSLQKEVDRLTLLLSKAQEAESVQKERALVLSQNLQEATAAHSAT
QGRLAALQKTLGQAENERRQLQERADELRASVSESKRNSTALMERMQTLQSDLSQSQLRR
SELETELRNTQETLRQKSDSLAETQRSLQSAQTDRAASEERLRSLQRVVALLETEKRDAE
RQAVRLEKDKSALRNTLDKVERQKLKTEESSMRLSAEKGRLDRSLNSAEQELQDAQRQIA
LLQAQLGELEQNHIVSEQSARLREDAQREAERLRISQREAERALAARERVHRQRIKGLEE
QVSTLKEQLQQEIRRRTPFTSSAPTLS
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcttgtgaaaactcaagtgagtcgagactggagtccgtcattcagaggttggag
gaaagcgttctgtctgaggagaagcggctgacggttcaaggatcttctccagatcatcca
gtgaccggtttaccggcccgtgtacgagagattgtgtccagaaacctcagtgacaccagt
gcaggtatgtcatcggttctgtcagtccaggaagagaaccgggttcttcagtcagaactg
agtcgtgtggaggatctactggcccacagtcgagcagagcgagatgaactggccatcaaa
tacagcgccatcagtgagaggttggagcaggcgttgtgtttggagggaggggacgagggg
agggactcaccggagtctcgcagctttgcgcagcagaacgtagatctgcgcagacgcttg
gatgaggagcaggcggcttataaacgcaaactcacagcgtatcaggagggacagcaaaga
caagcacagctcgtacagaaactacaggccaaggttctgcagtataagaagaagtgtgga
gatcttgaacagacgctgctggagaaatcaactgaactggacaaacacaaacttaatggt
cggtgtgattttaacggtcatcgtagagatgaagatgaacccagcagtgatttggagagc
gccctcatccgtctggaggaggaacagcagaggagcagcggtctgtctgcagtcaacgcc
atgctgcgagagcagctggaacaggccggattggccaacgaggcgctcagtcaggacatc
cgcagacttactgctgattggactaaagccagggaagagcttgagcagagggaatctgat
tggaggagagaagaggagtctttccacagttatttcagcagtgaacacagtcgtctgttg
gcgctctggaggcaggtggtcggcttccgcagatacgtgtgtgagctcaagagtgccaca
gagagggatctgtcggacatgcgtaatgagctggcgtgcgcgggtcagagcgtgcagctg
cagtgtgtgagcgcttgtgcagcgctgcgcagccgtgaggacgggtcgacgctggttctg
gaaagagagacgggtcacaggctccagctggagcagcagctgagagagacactgactgag
atgatgtccttacaggccaagagtgattctgatagaactgagctcaacacacggcttgca
gacgcagtgagggaggtggagcgactcaaagctcgcatagatgaccgagaacaaaaaatc
acgactctcagcagtgaactacaggttcagagcagtcatgaggaatcagaagtaaatata
ctgaggacacagacagcagcgctgcagaacacactccgacacgtcacacagctgctgttt
tctgactgtgaccgtctggatggagacactgaagaagccatgctgcctctactgcgttct
tcatcacctagccgctcctcgtcatcaccgcacatcatccctgacacctgtctgtctgct
ctacgctcagcagtgaccaacagacaactccaactacaggagctgcgagagcgtctgcag
tctgcgcagtcatcagtccagcagctgcgcaggcagctgggagaggtggagtctggccga
cgggatgcagagctgcgtatgcaggcgcttcaggcagagagagacgaggcccatagagag
agagagacaattgtgagagagagagacaggattaaaaaggagagagacacgctgagcagt
gtgaaagcgagcgtggataaagcagcgcaggcggcacagacgcaggtgcagctactgcag
ctggagtgcgaaaagctgcagctggctgtaacgtctgcgcagagagagcgagaccgtgag
agagaagagaaaaacgctaccatactagagagagaccgagcgagaacagagatagacaga
attcaacagttgagggaggagtcagagactcgtgcttcatctctacgtgttgaactgtct
gcagtgagagagtctctccagcaagggacgatagagaaacagctgatggacactgagaac
aaacagctggcagatgcactaaacaggtgtgagtcgagtcacgccgagatatccctgtcg
ctcagtaaacttcagtctgaggagtcatcactcagagattcactcgctaagatgagcaac
attaatgagagtcttgcacaggacaaatccgacctcaacagcatcatcatacagctggaa
gaagataagaatctgttagcgtctcagcgaagagaagcagatcaagagaaattgaccatc
agagatgagctcgtccgctccgagcaggacagattggagctggaatctgtccgtcttact
ctacaccaatcgctgcaggagtctgagctggcaagggtggggctggaggcggagcttcag
tcgctgcgggcagacagatccaaattacaagacaaaattacacagctggtgggtgagttg
agcagtttggaggcggagcttggcgcaatccgtggtgaaggagaccggcagagcaccgcc
cttgaggaagcggggcgtgggcgggcggagctagcgcgagagagggcggggctcttggtt
cagctgacggcatcagaaagagagaatgccacgttaacagaagagatcgctgcctttagg
tcagagagggaggctctggagacgagtctgtttgaggtacaacagcagatgaatcagatt
gaggctcgacgagaacatctggaggcagagaaccagcatctgcgactgcgcaccgacagc
atgacagctgagttgaagcgtttgcgtactgataaagagacagttttgtctcagagtgag
agagagaaagacatgctgagagatgcactcacgaccgctcaacaagaagcacagcgatct
ctgcgcaccgccctctctgaacaccaggaggagctggagagactgaccaatcagaaggag
gcactgcgttgcagtttggaggctgaacacgaggtggcgctgcgacaggtacgagaacaa
atggaggagcagatgagcagactcgagaaagaacgagatgaacttcaggaagagcttcgg
tccctgcagcgagacagaaaccagcgtctactgcaggcagaaactgacaaacagcaggcg
ctgtccatgaaggaggctgagaaggcggtactctctgagaaagtgtgctcccttcaggcc
gagctgagtactgcagcgttggaactggaccgagtgaatcgagagatggttctcctcaaa
gaccaggagcgggctgcagtcacagctttaaatgcagagctgcaggaaatgcgcagtcat
ctagaggacacagggagtttacatggccgtgagctgtgcagactgcaggagaactgtgcg
gaccagcagacccgagcagatgcggcactcagagagcttgaggaatgccgcttcctgctc
tcagccagcgaggagagtcacgacactgcaaagcgagaacttttggagatggataaacgc
ttttgccaaatacgggatataggcgaggggcacagacgagatggggcggagctacggcgg
gccatcagtgatgtaaccaaagagagggacgctctgagccaatcaaataatcagctgagg
gaagcactgcgagtggctgagagcgagagaatcagtgtgaagcgtgcgtgtgaggagagc
gagcagaaactttcattgctggaggagactttggcatctgtgcagaaagaggcatcagat
ctgcgcagttgtctgcgtgaggtggagagatccagactggaggcacgcagagagctgcag
gaactgcgcagacaggtgaaagttctggatgcagagcgagagcagacgggaaaacagatg
gccgagctgcagacgcgtctgtctggagaagatcagaaagatgaagagagagcgcgagaa
ctgatatctcttaaacaaaaactcacagacacagaaactaccagaaatgctcttcaaaaa
gagctgtgttctctgcagaggcgtctgagtgaaagcgaattgtgctggcgctctcgcgag
cgagacttgacgtctcatctacaggaagctcgcggctgtgagaagaagcttcaggacgag
gctcgcaatctcgccctgcgtgcgcaaacagcctccgatgcgtccgtgcagatgcagctg
cacctgagcgaggcggagggtcgtctggctgcgacggaggctgagttgtcgcgtgccgag
gccgcccgcagagacctggagtttaggctgtgcagtctgcagtcggcgctcacgcgtaca
ctaggcattgggtctagcgggcggagcggcagcagagggcggagtccggcaggctcatcc
ccttcctctatgatgtctctgtctcgacataggagtgtgtctccactgcgttgctcgcta
tcaccacacaaagatgtggcaggtaatataactccagataacacggtaattctgcggcca
ttgtctccagaaaggacagacgcgccgctgcccgtcgccctgcctgagctcgatcctgaa
acgcttcgcagtggccttagagacttcctgcaagagctcagagaagctcagagagaacga
gatgaggcacggggtcagttgggctcactacagagggaattagaggaagtgacatcagag
agagactccgcccaacatcgtgtgcttcagctacacaacacactacaagagtgccaagag
gataagcgtgccgtggatgggaaactgtcatcagctcaggctttgctgcatcagcatgaa
gaacagcagcggagaagcgagagagaaagacgtgttttaaacgacaaaatcaaagagctg
gagagagtcttactgaacgctgacactgaacgcaagcgtgttgaggagcagtgcagcaag
cgacgagctggagaggcacggttggaggcggagcgtcatcgactgcgtgaggctttggag
gcggctgaagggcacggcacgcgggtggagctggggaggcggagtttggagggagagctg
cagagactgagactgagtctggccgagagagagacagagcttctgtctgctaatgaacga
catgagaacatcctcaaacaggtggcggagggtgaaggacgcctctcgtctcttcagaaa
gaggttgacagattgacgctcttactgtctaaagctcaggaggcagagagcgttcagaaa
gaacgagcgctcgtcctctcccaaaacctgcaggaagccaccgcagcccacagcgccact
caaggacgccttgctgctctgcagaaaacactgggacaggccgagaatgaacgcagacag
ctgcaggagcgtgcagatgagctcagagcatccgtgtctgagagcaaacgtaatagcact
gctctcatggagcgcatgcagacgctgcagtcagatctgagtcagagtcagctgcgcaga
tctgaactagagactgagctacgcaacacacaggagactctgcggcagaaatctgacagc
ctggccgagacccagcgcagtctacagtctgctcagacagaccgcgcggcttcagaagag
cgtctgcgcagcctgcagagagtcgtggcgttactggagacagagaagagagatgcagag
agacaggccgtccgcttggaaaaagacaaaagtgcactgagaaacactctggataaggtg
gaacgacagaagctaaagacggaggagagcagcatgcgtctgtctgcagagaaaggacga
ctggatcgttcgctcaacagcgctgaacaagagcttcaggacgcacagagacagatcgca
ctgctgcaggctcagctgggtgaactggagcagaaccacattgttagcgagcagtcggca
cgtctgcgtgaggacgcccagcgcgaggccgagcgactgcgtatcagtcagcgtgaggca
gagcgagcgctggctgcccgagagagagttcaccgtcagcggattaaaggtctggaggaa
caggtgtccacgcttaaagagcagttacagcaggagatccgacgaagaacaccgttcacg
tcatctgcacctactctgagctga
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