Paramisgurnus dabryanus (large-scale loach): 135721066
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Entry
135721066 CDS
T10799
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135721066 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdab04147
]
135721066 (irf6)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
135721066 (irf6)
Exosome [BR:
pdab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135721066 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
135721066
NCBI-ProteinID:
XP_065099262
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All DBs
Position
24:581730..586753
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AA seq
469 aa
AA seq
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MSSHPRRVRLKPWLVDQVNNGTFPGLMWLDRDARRFQIPWKHATRHTPQQEEENTIFKAW
AVETGKYQEGVDDPDPAKWKAQLRCALNKSREFNLIYDGTKEVPMNPLKIYDVCDIQTPS
NPGSVPTDISDGDEDDVPDTPEPPPPYPPQCMSASPLAPVWSPPGSVSPMQPPSCPPPPA
VVWPKKEPQDVEMQLPPMEVQTPTPLEAMFATPETWISSLPMTDLEVQFYYRGKEVCPPV
IVSNPQGCRLFYGDLGPMVNQEELFGPISLEQVRFPPTEHITNDKQRVFTSRLLDVMDRG
LILEVSGHDIYAVRLCQCKVYWSGPCAPNPNAPNLIERQRKVKLFCLESFLSGVIAHQRG
QTSSEPPMFDIHLCFGEEWPDGRPRDRKLIMVQVIPVVARMISEMFSGDCTRSFDSGSVR
LQISIPDIKDNIVTHLKQLYRLLQTHQGQENWPLPPGAGIHLTQALQTQ
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcatccccggcgtgttcgactgaagccctggctggtcgatcaggtgaataat
gggacgtttcctggtctgatgtggttggaccgtgatgccagacgattccagattccatgg
aaacacgccacacgtcacacgcctcaacaggaagaggagaacaccatctttaaagcctgg
gctgtagagactgggaagtatcaggaaggagtggatgatccggatccagccaaatggaaa
gctcagctgcgctgtgccctcaacaagagcagagagtttaatcttatttatgatggaacc
aaagaagtaccaatgaacccactgaagatctatgatgtgtgtgacattcagacacccagt
aacccaggttcagttcctacagatatcagtgatggtgatgaagacgatgtgccggacact
ccagaacccccaccaccgtatccacctcaatgcatgagtgcttcaccgctggctccggtt
tggagtcctccgggttcggtctctccgatgcagccgcccagctgcccacctccgcctgcg
gtcgtgtggccgaagaaagaaccacaggatgtggagatgcagctgccgcccatggaggtt
cagactcctacacctctagaagcgatgttcgcaaccccagagacttggatcagctctctg
cccatgactgatctagaggtgcagttttattaccgcggtaaagaggtgtgtcccccggtg
atcgtgagcaacccgcagggctgtcggctgttttacggcgatctgggtccgatggtgaac
caggaggagctgttcggccccatcagtctggagcaggtcagattcccccccaccgaacac
atcacaaatgacaaacagcgcgtgttcacgagccgcctgctggacgtcatggatcgtggt
ctgatcctggaggtcagcggtcacgacatctacgccgtgagactgtgtcagtgtaaagtg
tattggtccggtccgtgtgctcccaatccgaacgctccgaaccttatcgagcgccagcgc
aaggtcaaacttttctgcctggagtctttccttagtggtgtaatcgctcaccagcgaggt
cagacgtcctctgagccgcccatgtttgatattcatttgtgttttggtgaggaatggccc
gacggtcgaccaagagaccgaaaactcatcatggtgcaggtaattccagtggttgcacgt
atgatcagtgagatgttctcgggggactgcacgcgctcgttcgacagcggcagcgttcgt
ctgcagatctccattccagacatcaaagacaacatcgtcacgcacctcaaacagctctac
cgtctcctacaaacacatcagggacaggaaaactggccgctgccgcccggcgccggcatt
cacctgacgcaggcgctgcagacgcagtga
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