Paramisgurnus dabryanus (large-scale loach): 135721372
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Entry
135721372 CDS
T10799
Symbol
nup54
Name
(RefSeq) nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135721372 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135721372 (nup54)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135721372 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
135721372
NCBI-ProteinID:
XP_065099632
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All DBs
Position
18:complement(7858705..7874695)
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AA seq
518 aa
AA seq
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MAFNFGGQSSSASLSGSGFGAATTSSAPTGFGFGSSTTGTFGGFGSTAAPASSGTTFSFN
TPSNTGGGLFGNTQNKGFGFTSGLGSNTATGTGFGTTALGFGGFGGIQPAQTQQGGLFNQ
QGSQSSHLINTASALSAPSVLSDERDSVLAKWNQLQAFWGTGRGYFNSSTPPVEFSQENP
FCRFKAVGYSCVPEMKDEDGLVALTLCKKEMDVRSQQQHLVESLHKLLGGNQTLSVNVEG
VRALPDDQTEVIIYLVERSPNGMSKRVPASTLYNYMEQMTVKSQLQQLGVTMTVSRTALT
PAQLKQLLQNPPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLKFQDQMTKQHQT
RVDIISNDISELQVNQATTAAKITQYKRKLMDLSHRVLQVLIKQEVQRKSGYAIQLDEEH
LRVQLETIQSELNAPTQFKGRLNELMSQIRMQNHFGSVRSEERYRVDADLLREIKQHLKQ
QQEGLSHLINVIKDDLDDIKMIEDQLHDGIHTRSSKLS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaactttggcggccagtcgagcagcgcgagtctttctggctctgggtttgga
gccgcaaccacatcatcagcacccacgggatttggatttggatcaagtaccacagggaca
ttcggaggttttggatcaacggcggctcctgccagtagtggcaccaccttcagtttcaat
actccatcaaatacaggtggaggtctctttggaaacactcagaataaaggcttcggcttt
acttctggtttgggttcaaacacagctacaggaacgggcttcggaaccactgcactgggc
tttggagggtttgggggaatccagcctgcccagacgcaacagggtggtctgtttaaccag
cagggctctcagtccagtcatctgatcaacaccgccagtgcgctctctgccccatctgtg
ctcagtgatgagcgtgactcagttttggccaaatggaaccaactgcaggcgttctgggga
acaggaagaggttacttcaacagcagcactcctccagtggagttcagccaggaaaacccc
ttctgccgcttcaaggccgtgggctacagctgtgttcctgaaatgaaggatgaggacggg
ttagtagctctgactctctgtaagaaagaaatggacgttcgctctcagcagcagcatctg
gtcgagtctttacataaacttctgggaggaaatcaaaccctcagcgtgaatgtggagggg
gtgcgagcgttacctgatgaccagacagaggtgatcatttatctggttgaacgttctcct
aacggcatgtcaaagcgagttccagcgtcgactctctataattacatggagcagatgact
gtaaaatctcagctgcaacagcttggtgtcacgatgaccgtcagtagaactgcgctgacc
ccagcgcagctcaaacagctgttgcagaacccacccgcaggtgtggaccccatcatctgg
gaacaggctaaagtggacaatcccgacccggagaagttgattccagtgcccatggtcggc
tttaaagagctcctacgaagattaaagtttcaagaccagatgaccaaacaacaccagacc
agagttgatatcatctctaatgacatcagtgagctgcaggtgaaccaggccacaactgcc
gccaaaatcacccaatacaaacgcaagctgatggatctttcacacagagtcctgcaggtg
ttaatcaaacaggaagttcagaggaaaagtggttatgccattcaactggatgaagaacat
ttgagagttcagttggaaaccatccagtcagagctcaacgcacccacacagtttaagggg
cggctgaatgaactgatgtctcagattagaatgcagaatcattttggatccgttcgttcg
gaggagcggtatcgtgtggacgccgacctgctgcgagaaatcaaacagcacctgaaacag
cagcaggagggtctgagtcacttgatcaacgtcattaaagatgatctggatgacattaag
atgattgaagaccaactgcatgatgggattcacacacgcagcagcaaactcagctga
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