Paramisgurnus dabryanus (large-scale loach): 135721395
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Entry
135721395 CDS
T10799
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
pdab
Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03420
Nucleotide excision repair
pdab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135721395 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
135721395 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pdab03051
]
135721395 (rad23b)
03400 DNA repair and recombination proteins [BR:
pdab03400
]
135721395 (rad23b)
Proteasome [BR:
pdab03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
135721395 (rad23b)
DNA repair and recombination proteins [BR:
pdab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
135721395 (rad23b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
Crinkler
Rad60-SLD_2
UBA_3
Dsc3_N
Ubiquitin_5
DUF1421
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
135721395
NCBI-ProteinID:
XP_065099664
LinkDB
All DBs
Position
18:7551213..7562628
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AA seq
377 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDAEETVKALKEKIENEKGKDSFPVAGQKLIYAGKILNDDTALK
EYKIDEKNFVVVMVAKPKTAPVSAPSSAATTTSGASSSTTTTPTPPTAPAAQSPSESPPK
EDKPAEEKPASSSPPSSTPISSANANIFEEATSALVTGQSYENMVTEIMLMGYERDRVVA
ALRASFNNPDRAVEYLLTGIPTEAEGGSVGGADPVAPSGGAPVVSTGLSSPSIIAPSQPS
TGSGANPLEFLRNQPQFLQMRQIIQQNPSLLPALLQQIGRENPQLLQQISSHQEQFIQML
NEPVQEAGQGGGGGGGVAEAGGGQMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEK
NENLAANFLLQQNFDDD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacattaaagactctccagcagcagacgtttaaaatcgacatcgacgcggag
gagacggtaaaggctttaaaggaaaaaattgagaatgaaaaaggaaaagacagttttcca
gtggcaggacagaagttgatatatgcaggtaaaatcctgaatgatgacacggctctaaag
gagtacaagatagatgagaagaactttgtggtcgtgatggtagcaaagcctaagacagct
cctgtatctgctccgtcatctgctgccacgacaaccagcggcgcttcctccagcactaca
acgaccccgactcctcctactgccccggctgcacaaagtccctctgagagccccccgaaa
gaagacaaacctgctgaagagaaaccggccagcagctcgccgccctcctccacacccatc
agttctgcaaatgcaaatatatttgaagaggcgacatcagcgttggtgacaggtcagtcc
tatgagaacatggtgactgagatcatgctgatggggtacgagagagatcgagtggtggct
gcactgagagccagttttaacaatcctgaccgcgctgtcgagtatctgctcacgggcatt
cccacagaggctgagggcggcagtgtaggaggtgctgacccagtggctccttcaggtggt
gctcctgttgtgtctacaggcctctcatccccatctattattgccccatcacagcccagc
acaggatcaggggcaaatcctctggagttcttgaggaaccagccacagttccttcagatg
agacagatcatccagcagaacccatctctcctgccagctttactacagcagatcggtaga
gagaacccacagctcctgcagcaaattagcagccatcaagagcagtttatccagatgctt
aatgagcccgtccaggaggcggggcaaggaggaggaggcggagggggtgtggctgaggct
ggaggtggacaaatgaactacatccaggtcacacctcaagaaaaggaagctattgaaagg
ctaaaagccttgggatttccagaaggacttgttatacaggcctactttgcttgtgagaag
aatgaaaatttggctgcaaactttcttttacaacagaactttgatgatgattag
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