Paramisgurnus dabryanus (large-scale loach): 135721431
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Entry
135721431 CDS
T10799
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03018
RNA degradation
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135721431 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
135721431 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135721431 (lsm7)
03041 Spliceosome [BR:
pdab03041
]
135721431 (lsm7)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135721431 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
135721431 (lsm7)
Spliceosome [BR:
pdab03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135721431 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
InhA-like_MAM
Motif
Other DBs
NCBI-GeneID:
135721431
NCBI-ProteinID:
XP_065099740
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All DBs
Position
24:7588270..7589788
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AA seq
103 aa
AA seq
DB search
MADKDKKKKESIFDLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagataagaaaaagaaggagagtatatttgatttgtcgaaatatatcgac
aaacatatcagagtgaagtttcaaggaggtcgtgaagcaagcggtgtcttgaaaggcttc
gacccactgttgaatcttgtgttggatggcaccattgaatatatgcgagatccagatgac
cagtataagctgactgaggacacccggcagctcggtctggtcgtgtgccgagggacgtcg
gttgttctcatctgtccacaggatgggatggaggccattccaaatcctttcattcaacag
caggatggataa
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