Paramisgurnus dabryanus (large-scale loach): 135721488
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Entry
135721488 CDS
T10799
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04510
Focal adhesion
pdab04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135721488 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
135721488 (rapgef1b)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
135721488
NCBI-ProteinID:
XP_065099827
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Position
18:5301879..5358825
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AA seq
1187 aa
AA seq
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MSGKIESKHESQKSHLSSFTMKLMKFHSPKNKRTPSKKGKQPPPELIVTTPEKPVNKKVS
RLEEQEKEVVSALRYFKTIVDKMSVDTKVLQMLPGSASKVLEAILPLMQGEARVQHSSVL
SSCHNRVCQSLANLIRWSDQVMLEGIDLDDKETVTTVTTVIKAVLDGVKELVKLTIEKQE
QPSPTSPSKPAPPVTITDSVCENPLTEREKAILSKTTPIVTPTDSLTDMSEEEVAPPKPP
LPGQKLAEHRTRMQMCTDPVAGQRRATAMEIPPALPPKRRQSAASPTRVAVVAPMSRIPR
GNSLTPGSRRQQQEFDVDLLQRRFSGGSQSYGGDSPRLSPCNSMGKLSKSDEQLSSLERD
SGQCSRNTSCETLEGYDPDYDFLNQDLSVSDPLPFPTGPCSSLSPLPECYGESQSLSPGQ
CPTHPRFSAPVTSHSSLDYCTPPLTPGPNNSTLPPALPQKKRRSVPIISPYPLYERLPSH
YDNLSEEDQSTPPFPVLTPVSPLPQVNGRDDLSQGTDPESPPPLPEKKGKQILQYMQFVE
DYSEPQPSVFYQMPQNESIYEQRRNKRFQEVYGSNDSYSSSDSVHEPVPPPALPPKQRQL
ASHTSPSSLSSSSSASFSPLPLPVGLQEEAEPALGLSLSVSNSFLSGHTSLTTPVSSDLV
GLTNASRALDGGGVSNGSLTSSLVSLAVCLPSESSLSDSLLTSASESVDECGEGEYVNLY
ASTQANGDNTHQTDTLTCDDGLHDHAPHIPSSNSKEALSKDRLKESSHGQIIEDIDELSL
IDHSEIMSLITLKAENDDGPDVRAGSGDILLVHATETDRKDLVLYCEAFLTTYRTFISPE
DLIKKLHYRYTRFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILRQLMDLVFRLV
CNGELSLARVLRKNILDKVEQKKLLRHIHALKPLAARGVSARPGTLHDFRSHEVADQLTL
LDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIIQQEKAQDREKLL
LKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAY
RAALAEVEPPCIPYLGLILQDLTFVHLGNPDFIDGKVNFSKRWQQFNILDSMRRFQQVHY
ELKRNEDIVCFFNDFSDHLAEEALWELSLKIKPRNISRRRTEREEKT
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagaaagcaagcacgagtctcagaagtctcacctctcctctttcact
atgaaactcatgaaatttcattctccgaaaaataaacgaactccatcaaagaaaggcaaa
cagccaccgccagagctcatcgtaacaacaccagagaaacccgtcaacaagaaggtgagc
cgattggaggaacaggagaaagaggtggtgagcgctctgcggtatttcaagacgatcgtg
gacaagatgagcgtggacaccaaagttttacagatgcttcccggatcagccagtaaagtc
ctggaggccatactgccgctgatgcagggagaagctcgggttcaacacagctcggtgttg
tcttcctgtcataaccgtgtgtgtcagagtttggctaatctcattcgctggtcggatcag
gtgatgctggaaggtatcgaccttgacgacaaggaaactgtgacaaccgttaccacggtg
atcaaagctgtgctggatggtgttaaggagctggtgaaactcactatagagaaacaagag
caaccatccccgacgtcccctagcaaaccagcgccccctgtgaccataacagacagtgtt
tgtgaaaatcccttaaccgaacgagagaaggcaatcctgagtaagaccacgcccatagtc
acgcccacagacagcttgactgacatgtcagaggaggaggtggctccgcccaagccacct
ctaccagggcagaaactggcagaacacaggaccaggatgcagatgtgcaccgatcctgtt
gccgggcagcggagagccacagcgatggaaatcccgcccgctctgccaccgaagaggcga
cagtctgccgcctcacccactcgtgttgccgtggtagcgccaatgagtcgaatcccacgt
ggtaacagtctgactcctggatctcgccgacagcagcaggagtttgatgtcgatcttctc
cagagacgtttctccggtggcagtcagtcgtacggaggagattctcctcgtctctctccc
tgtaacagtatgggaaaactgagcaagtcagacgaacagctttcttctctggagcgagac
agcgggcagtgttcgcgaaacactagctgtgaaacactcgagggatacgatcccgattac
gacttcctgaatcaggatctgtccgtttccgatcccttaccgtttcccacgggtccatgc
agcagtctgagccccctcccagaatgctacggagaatcccagtcgctaagccccggccaa
tgcccaacccatccccggtttagtgctcccgtgaccagtcattcttccctggactactgt
actccgcccctcacgccaggacccaacaatagcacgctcccccccgccctcccgcagaaa
aagcgcagatctgtgccaatcatatcgccctatcctctgtacgagcgccttccttcacac
tacgacaacctatcggaagaggatcagtcgacgccgcccttccccgtgttgacgccggtc
tcccccttaccgcaggtcaacggcagggacgacctctcgcagggtaccgaccccgagagc
ccaccaccattaccagagaagaagggcaaacaaatcctgcagtacatgcagtttgttgag
gattactccgaaccacagccgtctgtgttttatcagatgcctcagaacgagagtatttac
gagcagcggaggaataagcgatttcaggaggtttacggctcaaatgattcttacagcagt
tcggattctgttcacgagcccgtgccaccgcccgccctgccgcccaaacagagacagctg
gcttcccacacctctccttcttctttatcatcatcatcatcagcttctttttctcccctt
ccccttcctgttggccttcaggaggaggcggagcctgctcttggtctcagcctatcagtt
tctaattctttcctcagtggccacacctctttgaccacacctgtgagttctgacctggtt
ggcttgaccaatgccagcagagctcttgatggtggtggtgtctctaacgggtccttgacc
agttctctggtttctctggccgtctgtcttccttccgagtcgtctctctctgactctctt
cttacctcggcgagtgaaagtgttgatgaatgtggagaaggggagtacgtgaacctatac
gcatccacgcaggcaaacggtgacaacacgcatcaaactgacaccttaacatgtgatgat
gggcttcatgaccacgcccctcacataccctcatccaatagcaaagaggcgttgtctaag
gacagattgaaggaatccagtcatggacagatcatagaggatattgatgaactgtctctc
attgatcacagcgagattatgagcctaataacactcaaagcagagaatgatgacggtcca
gatgtaagagccggatctggtgatatacttttagttcacgctacagaaacggatcgcaaa
gatttggtgttgtactgtgaggcttttctcaccacataccgaaccttcatatcacctgag
gacctcatcaaaaaattacactacaggtatactcgattctgtcacagtccagacaccttt
aagaaacgtgtcagtaaaaacacattcttcgtgctggtgagagttgtggatgaactctgt
ctggtggagttgaccgaggacattctcagacagttgatggatctggtgtttcgtctggtc
tgtaacggagaactgagtctggcccgggttctgcggaagaacattctggataaagtggaa
cagaagaaactcctgcgacacatacacgcgctcaaacctctcgccgcacgaggcgtctca
gccaggcccggcacgctgcatgatttccgcagtcatgaggtcgctgatcagctgacactg
ctggacgcagaacttttctataaaattgagattcctgaggtgttgctttgggcaaaggaa
cagaatgaagaaaagagtccaaatctgacccagttcaccgagcactttaacaacatgagc
tactgggtgcgctctatcattattcaacaggagaaagctcaagacagagagaaactgctg
ctcaaattcattaagatcatgaagcacctgcggaaactaaacaacttcaactcttatttg
gcgattctctctgcgctggactctgcaccaatcagacggctggaatggcagaaacaaaca
tctgagggcttggaagagtactgcactttgattgacagctcctcatctttccgggcgtac
agagcagcgctagctgaagttgaacctccgtgtattccctacctgggattgattttacaa
gacctgacgtttgttcaccttggaaacccggattttattgacgggaaagtgaatttctcc
aagcgctggcaacagtttaacattctggacagcatgagacgcttccagcaagtacactac
gaactgaaacggaacgaagacatcgtctgtttcttcaacgactttagcgatcaccttgcg
gaggaggcgttatgggaactttcgcttaagatcaaaccacgaaacatctcccggcgcaga
accgaacgagaggagaagacctag
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