Paramisgurnus dabryanus (large-scale loach): 135721695
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Entry
135721695 CDS
T10799
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04010
MAPK signaling pathway
pdab04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135721695 (cacna1bb)
04020 Calcium signaling pathway
135721695 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdab04040
]
135721695 (cacna1bb)
Ion channels [BR:
pdab04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
135721695 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
135721695
NCBI-ProteinID:
XP_065100194
LinkDB
All DBs
Position
18:complement(10123324..10293849)
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AA seq
2196 aa
AA seq
DB search
MDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKDSYLRNGWNVMDFVVVLTGILT
TLGSQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAII
GVEFYMGKFHFTCFKQDTGEQVGDYPCGAEPPSRQCKTGEECDEYWKGPNFGITNFDNIL
FAILTVFQCITMEGWTDVLYNTNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAK
ERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEEDQNAEEKSPLDGAWYRRK
QNNPVLKRAKSRKGRNDLISAEEGDEPFTDISSVAPPGSPFARASLKSSKNDSSSYFRRK
EKRVRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPEWLTRALYLAEFVFLGLFLT
EMTLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAIQPGASFGISVLRALRLLRIFK
VTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFD
SFPAAIMTVFQILTGEDWNAVMYHGIESQGGVRSGMFSSVYFIVLTLFGNYTLLNVFLAI
AVDNLANAQELTKDEEEQEEAAKKSIALQKAMEVKEVSPMSAANISIAAFVKQNRDAISR
RSSVCSVHSLKEQQRSLQKMSIWEQRTNQLRRQNVLSSSEALYNELEPEERLRVSTALHL
RPDMKTHHDRPLVVDNREGTTENPKPPTPELQTSSAHQRKHHRCRGENGDTGEGRHHRHH
SRNRDHHGCLERTASQDGGHRYYRAPGSPEEGREVEERENRHHHARRSNGNGNGTVGNGS
RGESRVRGHREGEVSNGDRRRHRPRMKAQSTLDGEEFREKGGRGQRGRPTETGDSSLATS
PMQSPTEEKPEDKDNLKNSTRACLTGVNIPVTITAPPGETTIIPMNNIDGDSQLLNEEKK
DLEELDQNAPKHILPYSSMFVFGPSNPVRRLCHYVVNLRYFEMCILTVITMSSIALAAED
PVQANAPRNNVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGAL
VAFACSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYIL
FMFIFAVIAVQLFKGKFFHCTDESKTLEKDCRGQFLEYGSNGVAITQPREWKKYDFHYDN
VLWAFLTLFTVSTGEGWPTVLKHSVDATYEDQGPSPGFRMETSIFYVVYFIVFPFFFVNI
FVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPADKQSFQYKMWKFVVS
TPFEYSILTMIAVNTVVLMMKFYKAPDPYEDMLKWLNIIFTALFTLECILKVIAFGPLNY
LKEAWNIFDFVTVLGSITDILVTEIKDKLINLSFLKLFRAARLIKLLRQGYTIRILLWTF
VQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIQLTDDSAINHHNNFRTFFQALMLLFRSA
TGEGWHEIMLACLSDRPCDPLSGSHGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDN
FEYLTRDASILGPHHLDEYIRVWGEYDPAACGRMSYLDMYEMLRHMSPPLGLGKKCPPRI
AYKRLVKMNMPIAEDNTVHFTSTLMGLIRTALEIKLASGVLAQHLRDAELRKEINKIWPN
LSSKTVDLLVTPHKYNELTVGKVYAALMIFDYYKQNRAKRLQQQQAAPGIQSKVGVLFKP
MLSHTQMHEQEPLVSKDPPPCQSDSTPQLPPTTFHLTNGDTVQSQSSAMKKSPSGDVAQE
VIQETNRSRGQSDDGTDTSRSQELLEMTYMENDSDVGGYPVLEGHGRAASMPRLNTGIQR
SHIRHTAGPYLAPIADMSPIRRSTSSLTPHRGVQEVQLSEYDLERPKVGQTAAQERAHHH
HHHHHHRCQRRRDKKHKSLDRAISEEQPCTTDPNGESLPRERARERDRGRSHERKHHSSS
AAERKQRYYSCDRYGNHEHSLSAGPSRSTSPGETHDPNMLKQGSTTAKGSSIVHTSGTST
PCRGRRQLPQTPLTPRPAVAYKTANSSPIQLNTAQSTGACPARLSRGLSEHDALLSGNAH
RQSPVPVTRIGSDPNLGLFQQDSEAEDFQDALSTYGTGRSPRTHMSSGSAPTSMLLSRSQ
SGVPNGYHYSLGVNAAPGFSGRASGSYQEKDKDDWC
NT seq
6591 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaccccaatgtctgaacgcctggacgacacagaaccctactttatcgggata
ttctgtttcgaggctggcattaaaatcatcgccctgggcttcgtctttcacaaagactcc
tacttacgcaacggctggaatgtaatggactttgtggtcgttctgacagggatcttaacc
actctgggctcacaatttgatttgaggacactgcgggccgttcgagtgctgagaccgctc
aaactggtgtcaggaattccaagtcttcaagtagtactaaagtctataatgaaggcgatg
gttcctcttcttcagattggactgttgcttttctttgctattgtcatgtttgctatcatt
ggtgtggagttctacatggggaagtttcatttcacctgctttaaacaggacacaggagag
caggttggtgattatccatgtggtgcagagcctccctcgagacagtgtaaaactggagaa
gagtgcgatgagtattggaaaggaccaaattttggcatcacaaactttgataacatcctc
ttcgccatcctcacagtcttccagtgcatcaccatggaaggatggactgatgtgctatac
aataccaatgatgcctcggggaacacctggaactggctgtacttcatccctctcatcatc
atcggctccttcttcatgcttaacctcgtcctgggtgtcttatcaggggagtttgccaaa
gagagagaacgagtggagaaaaggcaggagttcctgaagctccgcagacaacagcagatt
gagagagagctcactggatacctggagtggatctgcaaagcagaggaggtgttgctggct
gaggaggaccagaatgctgaggagaaatctcctctggatggtgcgtggtataggagaaaa
cagaacaatccagttttaaaaagagcaaagagcagaaagggtagaaatgacctcataagt
gctgaggaaggagatgaacctttcacagacatctcttctgttgcgcctcctggatcaccg
tttgccagagcaagcctaaagagcagtaagaatgacagctcatcgtacttccgtcggaag
gagaagagggttcgctttttcattcgacggatggtgaaggcacaaagtttttattggatt
gtcctgtgtttggtgggactgaacacattgtgtgtggccatagttcactatgaccagcct
gaatggctcaccagggctttgtacctggcagagtttgtgttcctgggtctgtttctgaca
gaaatgaccctgaagatgtacggcctggggcctagaaactactttcactcttcatttaac
tgttttgactttggggtgatagtggggagtatttttgaagtgatatgggcagcgatccag
cccggcgcgtcttttggcatcagtgttctgagagccctgcgtctgctccgtatatttaaa
gtaaccaaatactggaactctctaaggaatcttgtggtttctctgttgaactcaatgaag
tccattatcagcttgctcttcctcctcttcctcttcattgtggtgtttgctctgttggga
atgcagctttttggaggccagtttaattttgaagatgaaacgcccacaactaactttgac
agctttcctgcagccataatgacagtcttccagattttgacaggagaggattggaatgcc
gtgatgtatcacgggattgagtctcaaggaggcgtccggagtggaatgttctcctctgtc
tacttcatcgttctaacactttttggaaactacacacttctcaatgtattcttggctatc
gctgtggataaccttgccaatgcacaagagctgacaaaggatgaagaggagcaggaggaa
gcagcgaagaagagcattgctcttcagaaggccatggaggtgaaggaggtcagtcccatg
tctgcggccaacatctccatagcagcttttgtaaagcaaaatcgagatgcaatctctcgt
agatcttcagtctgcagcgttcattcacttaaagaacagcaaaggtcccttcagaagatg
tccatatgggagcagcgaaccaatcagctgcgcagacaaaacgtacttagcagcagcgag
gccctctacaacgaattggagcccgaagagcgtctgcgcgtgtctacggccctgcacttg
cgacctgacatgaagactcaccacgatcgcccgctagtagtggacaatcgagaaggcacc
acagaaaaccctaaacccccgaccccagagttacaaacctcctccgcccaccagaggaaa
caccaccgatgtcgaggagaaaacggagatacgggagaggggcgacaccacaggcaccac
agccggaaccgagaccaccatgggtgcctggagcgcacggccagtcaggatggaggacat
aggtactaccgtgcacctggatctccagaggagggcagggaggtggaagagagagaaaat
agacaccaccacgcgaggcggtctaatgggaatggcaatggtacggttggtaacgggagc
aggggcgagagcagggtacgaggtcacagagagggggaagtaagtaatggagacagaagg
agacatcgaccacgcatgaaagctcagtccacgctagatggagaggaatttagggagaaa
ggaggaagaggacaaaggggtagaccaacagaaacaggagacagcagtttagccaccagc
cccatgcagtctccaactgaagagaagccagaagacaaagataatctaaaaaacagcacc
agagcctgtctaaccggagtcaacattcctgttactataactgctccaccaggagagacc
accatcattcccatgaacaacattgatggtgacagccaacttctgaatgaagaaaagaaa
gatcttgaggagctagatcaaaacgctcctaaacacatcctgccgtacagctccatgttt
gtgtttggtccatcaaaccctgttcgacggctgtgtcattatgtggtgaacttgcgatac
tttgagatgtgtattctcacagtcatcaccatgagcagcatcgcacttgcagctgaagac
cctgtgcaggccaatgccccccgcaacaatgtgctgaaatatttggactatgtcttcact
ggtgtgtttacttttgaaatggttataaagatgatcgatcttggactgctgttgcaccct
ggctcttacttcagggatctgtggaacatactggacttcattgtagtcagcggcgccctg
gtggctttcgcctgctcagggaccaaaggcaaggatattaacaccataaagtcgctgagg
gtccttcgagtgctgaggcccctgaagaccatcaaacggttgcccaaactcaaggccgtg
tttgactgcgtggtgaactctttgaagaatgtgctgaacatcctcatcgtttacatcctt
ttcatgttcatctttgccgtcatcgccgtacagcttttcaagggaaagttctttcactgc
accgatgagtccaaaaccctggagaaagactgcagggggcagttcctggagtatggtagc
aatggagtggccataacacagccgcgggaatggaagaagtatgattttcattatgacaac
gtcctttgggcctttctgaccctgttcaccgtctccacaggagagggttggccaacagtg
ctgaaacactcagtggatgcaacatatgaggaccagggtcccagtccgggtttccgcatg
gaaacctccatcttctatgtggtctactttatcgtcttccccttcttctttgtcaacatc
ttcgtggccttgatcattatcacgtttcaggagcaaggagataaagccatgtcagaatgc
agcttggagaagaacgagcgagcttgtatcgacttcgccatcaacgccaagcccctgacc
cggtacatgcctgcggacaagcaatctttccaatacaagatgtggaagtttgtagtgtcc
acccctttcgaatactccatcctgaccatgattgcagtcaacacggtggtcctcatgatg
aagttctataaagctcctgacccatatgaggacatgttaaagtggctgaacatcatcttc
actgcgctctttacactggagtgcatcctcaaagtcatcgccttcggtcctctgaactac
ttgaaggaggcatggaacatttttgactttgtaactgtgttgggaagcatcacagacatc
ttagtcacagagatcaaggacaagctgattaatctgagtttcctaaaactcttccgggct
gcccgtctcattaaactcctccggcagggatacaccattcgcatcctgctgtggaccttt
gttcagtcttttaaggctctaccgtatgtgtgtcttctcattgccatgctcttcttcatc
tatgccatcatcgggatgcaggtgttcggtaacatccaactgactgatgattccgccatc
aatcatcacaacaactttcgcaccttttttcaggccctgatgctgttgttcaggagtgct
acaggtgaaggctggcatgagatcatgttggcatgtctaagcgacagaccgtgtgacccg
ctctctggctcccatggaaaagagtgtggcagtgattttgcatatttctactttgtctcc
ttcatcttcctctgttccttcttgatgctgaacttgtttgtcgccgtcattatggataac
ttcgagtacctgacacgtgacgcttctattctcgggcctcatcacttggacgagtacatc
cgcgtctggggggagtacgaccccgccgcctgtggacgcatgtcttacctcgatatgtac
gagatgcttcggcacatgtcccctcctctgggtttgggaaagaaatgtcctccgcgaatc
gcctacaagcggttggtgaagatgaacatgcctatagctgaagacaacactgttcacttt
acatccactctaatgggtctcatccggaccgccctggagattaagctggcatcaggcgtt
ttggcacagcacctgcgtgacgctgaattgaggaaagaaataaacaaaatttggcctaac
ttatcctcaaaaacagtggatttactggtgacacctcataaatataatgagttgacagtt
gggaaggtctatgctgccctgatgatttttgactactataagcagaaccgagccaagaga
cttcaacagcagcaggcggctccaggcatacagagtaaagttggagtcctcttcaaacca
atgctttctcatacgcaaatgcatgaacaggaacccctggtctcaaaagacccgcctccc
tgtcaatcagattccacgccacagctcccacccacaacatttcacctgaccaatggggat
acagtacaaagccagagcagtgccatgaaaaagtctccctcgggggacgtcgctcaggaa
gtcatacaggaaacgaacaggtcgcgtggccaatcagacgacgggacagacacttccaga
tctcaggaattattagaaatgacatatatggaaaatgactctgatgtgggtggttaccct
gtgctggagggtcatggcagagccgcttccatgcctagacttaacactggcattcagcgg
agccacatacgccacaccgccggaccgtacctagcaccgatagcagacatgagtcccata
cggaggtctacgtcctcgttgactcctcacagaggggtacaggaggtccagctgagcgaa
tacgatctggagaggcctaaagtgggccagactgcagctcaggaaagagcccatcatcac
catcaccaccatcatcatcgctgtcagcgacgcagagacaagaagcacaaatcactggat
cgagccattagtgaggagcagccgtgcactacggatccaaacggcgaatcgttgcctagg
gaacgagcacgggagcgagatcgtgggcgctctcacgagaggaagcaccattcatcctca
gcagcggagaggaaacagcgatactactcttgcgatcgctatggcaaccatgaacacagc
ctgtcagccggacccagcaggtctacatcaccgggagaaacacatgacccgaacatgcta
aaacagggaagtaccacagctaagggaagttcaatcgttcatacctcaggcaccagcaca
ccctgccgagggcgtagacagctcccccagacacccctcaccccgcggcccgctgttgcc
tacaagactgccaactcctccccgatccagctcaacactgcccagtccacaggggcctgc
cccgctcgccttagtcgtggcctgtcggaacacgacgccctactcagcggcaacgcccac
cgccaatcccccgtgcctgtcactcgtatcggctccgaccccaatttaggtctctttcag
caagactctgaagctgaagactttcaggatgccttgagcacgtacggcacgggccgttcc
cccaggacccacatgtcctcaggctcggcccccacgtccatgctgctctcgcgcagccaa
agtggcgtgcccaacgggtatcactactctcttggagtgaacgcagcccctgggttcagc
ggaagagcttctggaagctaccaggagaaagataaagatgactggtgttag
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integrated database retrieval system
