KEGG   Paramisgurnus dabryanus (large-scale loach): 135727240
Entry
135727240         CDS       T10799                                 
Symbol
xpo1b
Name
(RefSeq) exportin-1
  KO
K14290  exportin-1
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03008  Ribosome biogenesis in eukaryotes
pdab03013  Nucleocytoplasmic transport
pdab03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    135727240 (xpo1b)
   03008 Ribosome biogenesis in eukaryotes
    135727240 (xpo1b)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    135727240 (xpo1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdab03019]
    135727240 (xpo1b)
   03009 Ribosome biogenesis [BR:pdab03009]
    135727240 (xpo1b)
   03016 Transfer RNA biogenesis [BR:pdab03016]
    135727240 (xpo1b)
   03036 Chromosome and associated proteins [BR:pdab03036]
    135727240 (xpo1b)
Messenger RNA biogenesis [BR:pdab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     135727240 (xpo1b)
Ribosome biogenesis [BR:pdab03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    135727240 (xpo1b)
  Pre-60S particles
    135727240 (xpo1b)
Transfer RNA biogenesis [BR:pdab03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    135727240 (xpo1b)
Chromosome and associated proteins [BR:pdab03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     135727240 (xpo1b)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd mTOR_dom Hydrolase_3 BspA_v
Other DBs
NCBI-GeneID: 135727240
NCBI-ProteinID: XP_065101115
LinkDB
Position
17:13626870..13650663
AA seq 1071 aa
MPAIMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVSLFTLTMMQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDVLQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISA
VLNPSNPVSNQVFIQEYVANLLKSAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcaattatgacaatgttagctgaccatgcagccagacagctgctggactttaac
cagaaactggatatcaacctgctggataatgtggtcaactgcctgtaccatggggttggg
ccacagcaaagaatggcccaggaggtgctcactcacttgaaggagcacccagatgcatgg
acacgagttgacaccattctggagttctcgcaaaatatgaacaccaaatactatgccctg
cagattctggaaacagttattaaaacaagatggaagattctgcccagaaaccaatgtgaa
ggcattaaaaagtatgttgtggggcttatcatcaagacttcatcagatgcggccaatgtt
gagaaagaaaaggtgtacattggaaaactcaacatgatattagtacagattttgaagcag
gagtggccaaaacattggccaacatttataagtgacattgttggagcgagccgcaccagc
gagagtctatgccagaacaacatggtcatcctgaagctcctgagtgaggaggtgtttgat
ttctccagtggtcagatgacacaggtgaaagccaaacacctgaaggacagcatgtgcaat
gagttctctcagatattccagctgtgccagtttgtgatggaaaattcccaaaatgcccca
ttggtgcatgccactttagaaacactgctgaggtttctcaactggattccattgggttat
atctttgaaaccaaactcatcagtactctggtgtacaagttcctaaacgtgccgatgttc
cgcaatgtgactctgaagtgcttgactgagattgcaggggtcagcgtgagccagtacgaa
gaacaatttgtcagtcttttcactcttaccatgatgcagctcaaacagatgcttcccctg
aacacaaatatccgactggcatacgcaaatggtaaagatgatgagcaaaacttcattcag
aacctcagcttgttcctctgcaccttcctcaaagagcacggacagcttatagagaagaga
ctgaacctcagagagactctcatggaggcactgcattacatgttgctggtgtcagaggta
gaggaaactgagatctttaagatctgtttggagtactggaaccacctggctgctgagctc
tacagagaaagccccttctccacttccacctctcctcttctttcagggagccaacacttt
gatgtaccgccccgcagacagctatacctgcctgtgctgtctaaggtgcgtttgctgatg
gtgagtcgcatggccaagcctgaagaagttctggtggtggagaatgatcagggtgaggtt
gttcgagagttcatgaaggacacagactccataaacctctacaagaatatgagagagaca
cttgtctatctgacccatctagactatgctgatacagagcgtatcatgacagagaagctt
cataatcaagtgaatggtaccgagtggtcctggaagaatctaaacacgttgtgctgggcc
attggttccatcagtggagccatgcatgaggaagatgagaagaggtttcttgtcacagtt
attaaggacctgctgggtttatgtgagcagaagagaggcaaggacaacaaggctattatc
gcctcaaacatcatgtacattgtgggccagtacccacgatttctacgtgctcactggaaa
ttccttaaaactgtcgtcaacaaattgttcgagttcatgcatgaaacccacgatggagtt
caggacatggcatgtgacactttcattaagatcgctcagaagtgcaggaggcattttgtg
caggtgcaggtgggagaggtgatgcccttcattgatgagatcctcaacaacatcaacacc
atcatctgtgacctgcagccccagcaggtgcatacgttttatgaagctgtcggctatatg
attggagcgcaaactgaccaggctgtgcaggagcacctgatagagaagtacatgttgttg
cccaaccaagtgtgggacagcatcattcagcaggccaccaagaatgttgacatcctgaag
gacccagagaccgtgaaacagttgggcagtattttgaagaccaacgtcagggcgtgtaaa
gctgtgggacacccttttgttattcagctgggccgaatctacctggacatgctcaatgta
tacaagtgccttagtgagaacatctctgctgccatacagaccaatggcgagatggtgacc
aagcagcctctcatccggagcatgcgcacagtaaagcgagagacgctaaagctgatctca
ggctgggtcagccgctccaatgacccacagatggtaggggagaattttgtccctccactg
ttggacgcggtgcttatagattaccagcgcaatgtccctgcggcaagggaaccggaagtg
ctcagtaccatggcgacgatcgtaaacaaactgggtggacacattacaggagagatccca
cagatatttgatgcagtgtttgagtgcacactaaacatgattaacaaagactttgaggaa
tacccagaacaccggacacatttcttctacctgctgcaggcggtgaactctcactgtttc
ccagcattccttgccattccaccagcccagtttaaacttgtgctcgactccataatatgg
gcctttaaacacaccatgagaaatgtggcagacactggcctgcagattctctacacgctg
ctgcagaacgtggctcaggaggaggcagcagcgcagagcttctatcagacttacttttgt
gatgtcctgcagcacatcttctctgttgttacagatacatcacacacagccggtttgacc
atgcacgcctctatcttggcgtacatgtttaatcttgttgaggaagggaaaataagtgca
gttttgaatccatcaaacccagttagcaaccaggtgttcatccaggaatatgtggccaac
ttgctaaaatcagctttcccacatttacaggatgcccaggtaaaagtgtttgtgactggt
ctgttcagtttaaaccaagacatcccagcattcaaagaacacttgagggatttccttgtg
cagatcaaggaatttgcaggcgaggacacctctgatctgtttttggaagagagggaagcc
tcactgcgtcaggcccaggaggagaaacacaaattgcagatgtccgtgcctggcattctc
aacccacatgaaataccagaggagatgtgtgactga

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