KEGG   Paramisgurnus dabryanus (large-scale loach): 135727297
Entry
135727297         CDS       T10799                                 
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    135727297 (wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pdab03009]
    135727297 (wdr43)
Ribosome biogenesis [BR:pdab03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    135727297 (wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_THOC3 Utp12 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_Aladin EIF3I Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_ACSF4 WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Tricorn_2nd
Other DBs
NCBI-GeneID: 135727297
NCBI-ProteinID: XP_065101190
LinkDB
Position
17:14569134..14620946
AA seq 654 aa
MATDGGQAALPCAFSTKSRQFLALCAQDGRLRIWNTESKTLQQEYVPSAHLSATCTCATW
GPCRAVQELPQRKRRKCEAGSASEQSDLLALGTAAGSVLIYSTVKGDLHCTLNGGHSGPV
NSVQWHPDDSLLYSGSDDTHIAEWDLQTGKVCCKWKADRLAVSSLCVSPDGKLLLSAGMT
IKMWNLETKEVYRKFTGHSTMVTTLAFATTRPPDSNGLYFLSGAAYDRLLSVWQVRSDGK
DKNSVVSFTLTDEPQHINLQTSKSKDEAVRLSVVCKDGQLHLFEHFLNGPCKKPLTPACS
LQVSTMKGESPVLIPLLAAALCSDRQNLMLAYGNHLQPVIEKIPFNTSERYICLVRDVQA
TLSLSVDTAVSKVKTPLTNKQKSKVLIPGLPGHKAPIKLTPNETEKRKKEPSTTEMSIEE
RLEQIELKVCGKGASKGSASLQTDSFAVLLVQGLESKDEKILNKIFQTKKEMLIKNTVAR
IPPTAVLPLLEELSRRLQGHPFAALLIVQWFKAVLTQHTSYLSSLPDLVSHLGSVYHIIE
SRVKLYQQITRLHGKMYLLMTQVASSGSANQVGEIDHTAKLVYEEESSTEDEGSGDEGRP
EDDSDNWEEDEASMELTGDKENHADEEDDDEDMNDESKASGDSDIDPENESEEE
NT seq 1965 nt   +upstreamnt  +downstreamnt
atggcgacagacggaggccaagctgcgctaccctgcgcctttagcacaaaatcacgccag
tttcttgccctctgcgcacaagacggacgattgcggatatggaataccgagagtaaaact
ctacaacaagaatacgtgccttcagcgcatttgagcgcaacttgtacatgtgcgacatgg
ggaccctgccgagcggttcaggaattgccacagaggaagaggagaaaatgtgaggctgga
tcagcatcagagcagtcagatctgttggcactgggcactgctgctgggtctgtcctgatc
tacagtacagtaaaaggagatctccattgtactctgaatggaggacacagtgggccagta
aacagtgtgcagtggcatccagatgactctttgttgtacagtggctcagatgacacccac
atagctgagtgggacctgcaaacaggaaaagtttgttgtaaatggaaagcggaccgattg
gctgtcagtagcttgtgtgtgagtccagatggaaagctactgctttctgcaggaatgacc
atcaagatgtggaacctggagactaaagaagtatacagaaagtttacaggtcattctacc
atggttacgactctggcctttgccacaacacgacccccggacagcaatggattgtacttc
ctgtctggtgcagcttatgataggctcctgagtgtgtggcaggtgcggtcagatggcaaa
gacaagaactctgtggtttcttttacactgacagacgaaccacaacacataaaccttcag
acatccaagagcaaagatgaggctgtgaggttatcagtggtttgtaaagacggtcaactt
catctctttgagcactttcttaatggaccgtgtaagaagccactgacaccggcttgttca
ctgcaggtgtccacaatgaaaggagaatcacctgtactcattcctctgctagcagcagct
ctctgctcagacagacagaacttgatgttggcatatggaaatcacctgcagcccgtaata
gagaaaattccatttaacacatcggaaagatatatttgcttagtcagagatgtacaagcc
acactttctctttctgtagacacggctgtctccaaggtgaagacaccacttactaataaa
caaaagagcaaagttttgatacccggacttccaggccacaaggcaccaatcaaattaact
cccaatgaaacagagaaaaggaaaaaagagccaagtaccacagagatgtctatagaggag
cgtttggagcagattgagttgaaggtttgtgggaaaggggccagtaaaggatcagcttcc
ctgcagacagacagctttgctgtgttacttgtgcagggcctagagagcaaagatgagaag
atcttaaataaaatatttcaaaccaaaaaggaaatgttgatcaaaaacactgtggcccga
ataccacctacagctgtcctgccattactggaagagttgtccagaagactccagggacat
ccatttgcggctctgcttatagttcagtggtttaaggctgtacttacacaacatacatca
tacttgtcttcgctgccggatttggtgtctcacttggggtcagtctaccacattatcgag
agcagagtgaagttatatcagcagattaccagactgcatggcaaaatgtacctgctcatg
acacaggtggcgtcaagtggcagtgcgaaccaagttggtgaaattgatcacacagcaaag
ctggtttatgaagaggagtcgtcaactgaggatgaaggttcaggagatgaaggacgtcct
gaagatgactccgataattgggaggaggacgaggcatcgatggaattgacaggggataaa
gagaaccatgcagatgaggaagacgatgatgaagatatgaatgatgaatcaaaagctagt
ggggattcggatatagaccctgaaaatgaaagtgaagaggaatag

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