Paramisgurnus dabryanus (large-scale loach): 135727727
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Entry
135727727 CDS
T10799
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135727727 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
135727727 (snx27b)
Membrane trafficking [BR:
pdab04131
]
Protein recycling
Others
Others
135727727 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
135727727 (snx27b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
PDZ_2
SNX17_FERM_C
USP7_C2
VirE3
SNX17-31_F2_FERM
DarA_N
RA_3
Sina_TRAF
Motif
Other DBs
NCBI-GeneID:
135727727
NCBI-ProteinID:
XP_065101791
LinkDB
All DBs
Position
13:complement(18752463..18770972)
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AA seq
569 aa
AA seq
DB search
MADVVEGDCTRSAAPSAPQSSARNGSGMSSGTCAGGHVTTTVASGPRLVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHK
QVVDLIRAGEKELVLAVLSVPQPETDSLDPGDDGSSQSCYDYSDKQAVPISVPTYKHVEQ
NGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFAFPKLPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTVTVRVRKNC
TTDQVYQAVVTKIGMDSITASYFALFEVINHSFARKLAPNEFPHKLYVQNYTSAIPGTCL
TLRKWLFTTEEEFLLNDNEVAISYCFHQALDDVKRGFIKVGEKSYQLQKLNEQRKMTMYL
SILRTCEGYNEITFPHCSCDSRRKGHVITAISILHFKLHACTEDGTLENQVIAFEWSEMQ
RWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATDKD
NKNCSKDEYLPAVERQKGWRHMNEEIISS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgttgtcgaaggagactgtactcgttccgctgccccttccgctccacagtcg
tcggctcgtaacggatccggcatgagctctgggacgtgcgccggtgggcacgtcacgacc
acggtcgcctccgggcctcggctggtccgcatagtcaaatcggactcgggctacggtttc
aacgtccgcgggcaagtgagcgaaggagggcagctgaggagcattaacggtgaactttac
gccccgttgcagcacgtaagcgccgtgttaccgggcggcgctgcggaccgagccggaatc
tcaaagggcgaccgtattcttgaagttaatggggtaaatgtggaaggagccactcataag
caagtggtagatctaatccgagcaggagaaaaagagttggtcttggccgtcctgtcagtc
ccccagccagagacagacagccttgatccaggggacgatggctcgtctcagtcttgctac
gactacagcgacaagcaggccgtccccatctctgtgcccacttacaaacatgtagagcaa
aacggggagaagtttgtagtgtacaacgtgtacatggcaggcagacagttgtgctccaag
cgttatcgggagtttgccatcttacatcagaatctgaagagggaatttgcaaactttgca
tttcccaagctgccagggaaatggcctttctcactttctgagcaacagctagacgctcgc
agacgagggcttgaggagtacctggaaaaagtatgttctgttcgggttattggggagagt
gacattatgcaggaatttttgtcagagtcagacgagaactataatggtgtttctgatgtg
gaactgagaatagcaatgccagacaaaactacagttactgtccgggtgcgaaagaattgc
acaacagaccaggtctatcaggctgtggtaacaaagattgggatggacagcattactgca
agttattttgctctatttgaggtcattaaccactcatttgcacgcaagcttgcccctaat
gaatttcctcataagctttatgtgcagaattacacatctgccattccaggcacctgtctc
acactacgcaagtggctcttcaccacagaagaagagtttttgctcaatgacaatgaagtg
gccatcagctattgctttcatcaggctctggatgatgttaaaaggggattcatcaaagtt
ggggagaaatcctaccagctccaaaagcttaacgaacaaagaaaaatgactatgtattta
agtattcttaggacatgtgagggctacaatgagatcacttttcctcactgctcctgcgac
tcgcgaaggaaaggtcacgtcattacggcgataagcatccttcacttcaaactccacgcg
tgcacagaggatggcactctagagaatcaggtgattgcgttcgaatggtcagaaatgcag
agatgggacacggatgaagagggaatggctttctgcttcgagtatgcacgaggggagaag
aaacctcgctgggtcaagatctttactccatatttcaactacatgcacgagtgctttgag
agagtattctgtgagctgaaatggagaaaagaggttgaagaggaggccacagacaaggac
aataagaactgcagtaaagatgaatatcttccagctgttgagagacagaagggatggagg
cacatgaatgaagagataatctcctcttga
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