Paramisgurnus dabryanus (large-scale loach): 135727884
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Entry
135727884 CDS
T10799
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135727884 (rnf115a)
04121 Ubiquitin system [BR:
pdab04121
]
135727884 (rnf115a)
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135727884 (rnf115a)
Membrane trafficking [BR:
pdab04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
135727884 (rnf115a)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135727884 (rnf115a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-RING_UBOX
zf-C3HC4_2
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
zf-C3HC4_3
DUF8608
FAR1_N
C1_2
zf-RING-like
zf-RING_6
HypA
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
135727884
NCBI-ProteinID:
XP_065102036
LinkDB
All DBs
Position
13:complement(21679399..21688882)
Genome browser
AA seq
312 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVSPKLPEYICPRCDSGFIEEVTEDSSLLDSSSNNFDDTAS
QFAELWQLLFVERPFTLDLDSPESERIPGGGSGSGILGAGPFGGSVPGGLGGHLAGPLGG
GEHWGPGRPSRLHSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGVPGSPPLSWTGM
LHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSLPTIIITQEQAVDCNMECP
VCKEDYTVGEPVRQLPCNHIFHSDCIVPWLEMHDTCPVCRKSLNGDDSSTQSSSSESSSL
NTDPRTPERWSF
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcggcggtccctccgcatcgcttcttctgtcattgttgtaagggtgaa
gtaagccccaaattaccggagtatatatgtcccagatgtgactccggctttatcgaggag
gttacagaagactcaagtcttctggacagtagttcaaataactttgatgacacggcttca
cagtttgctgagctttggcagctgttgtttgtagagaggccgttcactctggatcttgac
agtcctgaatccgagcgaatcccaggaggtggaagtggctctgggatacttggagctggg
ccattcggcggttctgtcccgggtgggcttggtgggcacttggctggccctctaggtgga
ggggagcactggggtcctggtcgtccttcacgtctgcacagtcagaggagataccgatcc
agaggaagcagtcgaccggatcgctctcctgccgttgagggaatagtacaacaatttctc
gcaggtctttttgccaattcaggagtaccaggttctcctccactgtcatggacaggcatg
ctgcactcaaacccaggggactacgcctggggacaggggggtctggatgcagtcatcaca
cagttattgggtcagtttgagaacacgggtccccctcctgcagagaaagagaaaatttcc
tccctccccaccataatcatcactcaggaacaggctgtagactgcaatatggagtgccct
gtatgtaaagaagactacacagttggtgagccggtcaggcagctgccctgtaaccacatc
ttccacagcgactgcatcgtgccctggctagaaatgcacgacacatgtcctgtgtgcagg
aagagcctgaatggagatgacagcagcactcagtcgtcatcatcagagtcttcctcccta
aacactgatcctcgcacaccggagagatggtccttctga
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