Paramisgurnus dabryanus (large-scale loach): 135727984
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Entry
135727984 CDS
T10799
Symbol
scrt1b
Name
(RefSeq) transcriptional repressor scratch 1b
KO
K09219
scratch
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135727984 (scrt1b)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
135727984 (scrt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-met
DUF7479
zf-BED
Rpr2
zf-C2H2_15
HypA
zf-C2HC_2
zf-C2H2_11
DUF7351
zf-C2H2_16
zf-C2HE
DpnI
Motif
Other DBs
NCBI-GeneID:
135727984
NCBI-ProteinID:
XP_065102150
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All DBs
Position
13:14708303..14711871
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AA seq
279 aa
AA seq
DB search
MPRSFLVKKVKLDDFSSTELESAYGRSRTDLSFRIHDKGYISDYITPVVYDGESDGGIKV
PSPGPIYDSNHSDYGAPDSDQPDSPQSEITSGYINGDNAVSEGYTVDAFYITDGRSRRKV
ISSSRTLQRHSCNECGKSYATSSNLSRHKQTHRSLDSKMAKKCPTCGKVYVSMPAMAMHL
LTHDLKHKCDICGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAF
KHFKCKRCNKTFALKSYLNKHYESACFKGAFSPLASVEA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggtcttttttggtgaaaaaggtgaagcttgatgatttctcatccactgaactt
gagagcgcgtacggcaggtccaggaccgatctgagctttcggatacacgacaaagggtac
atcagcgactacatcaccccagtcgtttatgatggagaaagtgatggtggtattaaagta
ccttctccaggaccaatttatgacagcaaccatagtgactatggggcacctgactcggac
cagcctgacagtccacagtcagagatcacatccggctacattaacggtgacaatgcagtg
agcgaaggttacaccgtagatgctttctacatcacggatggcaggtcacgtaggaaagtg
atcagcagctcgcggaccctccagcggcactcgtgcaacgaatgtggcaaatcctacgca
acgtcttccaatttgagcaggcacaaacagacgcaccggagcctggacagcaagatggcc
aaaaagtgcccaacatgtgggaaagtgtacgtgtccatgccagctatggccatgcacctg
cttacccatgacctcaagcacaagtgtgacatatgtggcaaagccttcagcagaccttgg
ctattgcagggtcacatgcggtctcacacaggtgagaagccctttggatgtgcacactgt
ggaaaagcgttcgctgaccgttccaacctgcgggcgcacatgcagacccactcggcgttt
aagcatttcaaatgcaagcgatgcaacaaaactttcgcgctcaagtcctacctgaacaag
cattacgagtctgcgtgcttcaaaggcgcgttctcacctcttgcgtctgttgaggcatga
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