Paramisgurnus dabryanus (large-scale loach): 135728200
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Entry
135728200 CDS
T10799
Symbol
zc3h12aa
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135728200 (zc3h12aa)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
135728200 (zc3h12aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
RuvA_C
Motif
Other DBs
NCBI-GeneID:
135728200
NCBI-ProteinID:
XP_065102418
LinkDB
All DBs
Position
13:31008411..31016338
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AA seq
572 aa
AA seq
DB search
MQSRCHHQSTGLGHDGPNLSDLQMKVDFFRKLGYSPQEVKAALRKLGLGTDTNAVLGELV
RSGAKAVPFSTSECEEGFGLSGRGGGSSRGPGSRESTPEDTAEAESDLKPIVIDGSNVAM
SHGNKEVFSCRGIELAVNYFLERGHRNITVFVPSWRREQPRPDVPISDQHILDELERKKI
LVFTPSRRVGGKRVVCYDDRFIVKLANDNDGVIVSNDTYRDLQSERPEWKRCIEERLLMY
SFANDKFMPPDDPLGRHGPNLDNFLRKKTMLPDQKRQLCPYGKKCTYGIKCKFYHPERAN
QSQRSLADELRDNARLADGRGTGSQRDVQKRYDAGFGSCSASLEQELEEKLNLECEERND
RYWDAIFSAKKPPAASAASGLQPQFPTNPSSIFSSDSGLGSYVSQFSESCHSLEEQHKMR
HNHPLMSSSSNPILSAGGPHCGDNKRSYSCNYQAGCNAYGSVPMSGPLQHYSLPAYMQQS
SWPYAFYLPQMHANSLPEPLPSPNAHSSPDSYGRLRSQVVKPQEDREEVRRKLYAIFNPH
HVDRVMDMFPQLIDAQQLAAEVLKLKSKGEFF
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccaggtgtcaccatcaatccaccggcctgggccacgacgggccgaacctctct
gacctacagatgaaggtggacttctttcgtaagctgggttactctccacaggaggtcaaa
gccgccctgcgcaagctcggcctgggtacggacactaacgcggtgttgggggaactggtt
cgctccggggcgaaggctgtgcctttctcaacctctgaatgtgaggagggttttggtttg
tccggtcgtggaggaggctcttctaggggaccaggttcaagagagtccacgccagaggac
accgctgaagccgagagtgacctgaaacccatagtcattgatggcagcaatgtggccatg
agccatgggaacaaggaagtgttttcgtgcagagggattgagctggcagtcaactacttc
cttgagcgaggacacaggaacattactgtattcgtgccgtcctggagaagagagcagccc
aggcctgatgtgcctatttcagatcaacacattttagatgagcttgaacggaagaagatt
cttgtgtttacgccttcacgaagggttggaggaaagcgtgtggtctgctacgacgatcgc
tttattgtgaagctagctaatgataatgatggcgtaatagtgtctaacgatacataccgg
gatctgcagagcgaacgtccggagtggaagcggtgcattgaggagagactgctcatgtac
tcttttgccaatgacaagttcatgccaccagacgatcctctcggccgtcatgggcccaac
ttagataattttcttcgaaagaaaacaatgttaccggaccaaaagcggcaactctgtcca
tatggtaaaaagtgcacatacggaatcaagtgtaagttctaccaccctgagcgtgccaac
caatcgcaacgttcgctagcagacgagttacgagataacgccagacttgcggacggcaga
ggaaccggatcacagagagacgttcagaaaagatatgatgccggttttggctcttgctct
gcgtcactggagcaagaactggaagagaagctcaatctagaatgtgaagagagaaacgac
cgttactgggacgccattttctcagcaaaaaagcctccagccgccagtgctgcatcaggt
ctacaacctcagttcccaacaaacccttcatccattttcagttcggactctggcctcggc
tcctacgtcagccagttttccgagtcgtgtcacagtcttgaggagcaacacaagatgaga
cacaatcatccattgatgtccagctcatcaaaccccatcttgtcggcaggtggcccgcac
tgcggtgacaacaagaggtcttattcctgtaactatcaggccggctgtaacgcctacggc
tctgttcctatgtccgggcctctccagcattacagtctacccgcttacatgcagcagagt
agctggccttacgctttctacctaccacagatgcatgcgaacagcttaccagaacctctc
cccagccccaatgcccacagctcgcctgacagttatggacgcctgcgcagccaagtcgtg
aaaccacaggaagatcgtgaagaggtccggaggaagctttatgccatttttaacccacat
catgttgacagagttatggacatgttcccacagctgatagatgcccaacaacttgctgca
gaggttctcaaactcaaatcaaagggagaatttttctga
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