Paramisgurnus dabryanus (large-scale loach): 135728894
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Entry
135728894 CDS
T10799
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135728894 (lingo3a)
Membrane trafficking [BR:
pdab04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
135728894 (lingo3a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
I-set
LRR_4
Ig_3
ig
Ig_2
LRR_14
LRR_9
LRR_LRWD1
LRRNT
Cupin_1
LRR_EndoS
V-set
Ig_6
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
135728894
NCBI-ProteinID:
XP_065102635
LinkDB
All DBs
Position
24:complement(15033128..15107453)
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AA seq
604 aa
AA seq
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MADCPHLSLPGLFVLLITASVTRGQSCPQRCDCFQQQRAVMCQNKRLSSIPAGIPVDTRL
LDLSGNSLRWVEYNDLATFSKTEELDLSENLISVLEPNAFSSLLNLKVLRLRANQLKLIP
MGAFSRLTNLTTLDLSENKLVILLDFTFQDLRNLRNLEVGDNDLVYISNKAFLGLVGLRE
LTIERCNLTSISGQSLSYLRGLVTLRLRYLSIASLEEQNFRKLGGLRGLEIDHWPFLEYI
SPHSFQGLNLSWLSITNTNISTVPTGALRNLIHLASLDLSHNPISVLESWALRDLVRLKE
LHLVGTNLISVQSYGLGGLQQLRLLNLSNNKLVTLEESSFHSVNTLETLRVDGNPLSCDC
RLLWILQRRKTLNFDGRSPVCAAPVEVRGKTLSTFTDSALFDHFTCQRPKIRNRKLQQLT
AREGQVVSFVCSAEGDPTPVIFWISPQRRRITTKSTGRVIVLPEGTLEIRYAQVTDSGTY
ICIASNAGGNDTYFATLTVSGSPLDGALANRTYYVGDLNDTNLNDTRVFLKFTLDLKTIL
VSTAMGCITFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPATSGGQGGARKFN
MKMI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgtccacacctgagcttaccggggctgtttgtgctcctgatcactgcatct
gtaacacgaggccaaagctgcccgcaacgctgtgactgtttccagcagcaaagggctgtg
atgtgccagaacaaacgtctaagctctattcctgcgggtataccggtcgacacgcggctg
ttggacttgagcggcaacagtttgcgatgggtggaatacaatgacctggcaaccttctca
aaaacggaggagctagacctgagcgaaaacctcatcagcgtgcttgaacccaacgccttt
tccagtttgctcaatcttaaagtcctccgtctccgagccaaccagctgaaactcataccc
atgggtgccttttcgcgtctaaccaaccttaccactttggatttaagtgagaataaacta
gttatcctattagacttcaccttccaggacctgaggaacctgcgcaatcttgaggtcggg
gataatgatttggtgtacatttctaacaaagctttcctgggtctagtcggtcttcgggaa
ctcaccatcgagagatgcaaccttacttctatatccggacagtctctttcttaccttcgt
ggtttggtgacgctacgattacgctacctcagcatcgcttcattggaagaacagaacttt
cgtaaactgggtggtttgcggggtcttgagatcgaccattggcccttcctcgagtacatt
tctccacacagcttccagggcctcaatctttcttggctctcgattaccaacaccaacatt
tccactgtgcctacgggtgctctccgtaacctcattcacctggccagcctcgatctttct
cacaaccccatctctgttctcgagtcctgggccttgcgtgaccttgtacgtttgaaggaa
ttgcacctagttggtacaaaccttatatctgttcagtcctatggtcttggaggtttgcag
cagctacgcttgctcaacctttcaaacaacaagttggttaccctggaggaaagctcattc
cactcggtaaacaccttggagacgttgcgcgtggacggcaaccccttgtcctgcgactgc
cgcctactgtggatcctgcagcgtcggaaaaccctcaattttgacggaaggtcgccggtt
tgcgccgcacccgtggaagtacgaggaaaaacacttagcaccttcacggactctgcgctg
tttgaccacttcacctgtcagcggccaaaaattcgcaaccggaaactgcagcagctcacg
gcacgtgaaggccaggtggtgtcgttcgtgtgcagtgccgaaggagatccgactcccgtc
atcttttggatttctcctcaacgtcgccgtatcaccactaagagcacaggccgcgttatc
gtactaccagagggcacactggagattcggtacgcccaggtaacagacagcgggacttat
atttgcatagctagcaatgccggtggcaatgacacatactttgccacactcacagtgagt
gggtcgccacttgatggtgcgttggcaaatcgcacctattacgttggtgatctaaatgac
acaaacttaaatgacacgcgggtcttccttaagttcacgttggacctaaaaaccatcctg
gtctccacagcaatgggctgcatcacttttttgggtgtggtgctgttctgctttatactg
ctgttcgtttggagtcgagggcgtggtcagcataaaaacaatttctcagtcgagtattcc
tttagaaaagttgacggcccggctaccagtggcggacaaggaggcgctagaaagtttaat
atgaaaatgatataa
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