Paramisgurnus dabryanus (large-scale loach): 135729328
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Entry
135729328 CDS
T10799
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdab03400
]
135729328 (apex2)
Enzymes [BR:
pdab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
135729328 (apex2)
DNA repair and recombination proteins [BR:
pdab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
135729328 (apex2)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
135729328
NCBI-ProteinID:
XP_065102958
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All DBs
Position
11:complement(13733436..13736285)
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AA seq
566 aa
AA seq
DB search
MKIVTWNINGIRTFKSGIKKILDSFDADIICAQETKVTRDLLDEKTAIVDGYNSYFSFSR
GRSGYSGVVTYCKDSAAPFLAEEGLTGLLNTHEEAVGCYSDHLDFSSEELLALDNEGRAV
ITQHHFMSADGPQKLTVINVYCPRADPDKPERKQYKLQFYKLLQSRAEAILSSGSHVIVL
GDVNTSHRPIDHCDPDDVDNFEDNPGRKWLDHFLFGSSENGDCGDEFEDVSHKSASGGKF
VDTFRHFHPERTDAFTCWSTMTGARQTNYGTRIDYIFSSRFLVENIFSGVDIMPEVEGSD
HCPVWAQLSCTLLPSPKYPPLCTRHMPEFAGRQQKLSRFLVKVSDGRLPGSQEAGEICEN
LNPVVKGNNIVKKRPADREAETTANKPKRSKQTKPESTPKGNLLSFFKPKQTIFNTATLN
VNPKQAECPKHVPSTESSGCHRTHARLDDETDCNTTQTRSCPSGVEEDTHVSMVMEKQIK
KQDQQDKEATPVENCRKGPSSFWKEILHGPPQPPPCKSHNEPCVLRTVKKAGPNLGRQFF
VCARPQGHASNPQARCNFFAWVDKGK
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtaacatggaacataaatggcatacgaacatttaaaagtggcatcaagaaa
attctggattcatttgatgctgatataatatgcgcccaagaaactaaagttactcgtgac
ttgctcgatgaaaagacggcgattgttgatggctacaattcatactttagttttagccgt
ggacgaagtggatactcgggtgttgtaacctactgcaaagacagtgctgcaccattcctg
gcagaggaaggattgacaggtcttctcaacactcatgaagaggctgtgggttgctatagt
gaccatcttgacttttcaagtgaagagttgctggcactagacaatgagggaagggctgtc
atcactcagcatcacttcatgagtgcagatggaccacaaaagctgactgtgataaatgtt
tactgcccacgtgccgatccagacaaacctgagcgaaaacagtacaagctccagttttat
aagctcctccaaagcagagcagaagccatcttgagctcagggagtcatgtcatcgtttta
ggggatgtgaacacttctcatcgacccatagaccactgtgacccagatgacgtggataac
tttgaggataaccctgggagaaagtggctggaccatttcctgtttggatcatcagaaaat
ggtgactgtggagatgaattcgaagacgtctcacacaaatcggcctctggtggcaagttt
gttgacacgttccgccatttccacccagagcgcactgatgcctttacgtgctggtccaca
atgactggtgccaggcagaccaactacggcacacgtattgactacatcttctccagtcgc
tttctggtggagaacattttcagtggagtcgacatcatgcctgaagtagaaggatctgat
cactgtcccgtatgggcacagctaagctgtaccctcctaccaagtcccaagtacccacct
ctatgcacacgtcacatgccggaatttgctggcagacagcaaaaactttcacgtttcctt
gtcaaagtttctgacgggaggcttccaggatcacaggaggctggggagatttgtgaaaac
ttgaatcctgtggtaaagggaaacaatattgtaaagaagagacctgcagatagagaggca
gagaccactgcaaacaaacctaaaagaagcaagcagacaaaaccagaaagtacacccaaa
ggcaaccttttaagtttttttaagcctaagcaaacaatatttaacactgccactttaaac
gtaaacccaaaacaagcagaatgtcctaaacatgtacccagcacagagagctcagggtgt
catagaactcatgcgaggcttgatgatgaaacagactgcaatacaacccagaccagaagc
tgccccagtggtgtggaggaggacacgcatgtttccatggtaatggagaaacagattaaa
aaacaggatcaacaagacaaagaagctacacctgtagagaactgtaggaaagggccgtct
agcttttggaaagagattttgcatgggccccctcagccccctccctgcaagtcacacaat
gagccctgtgttcttcggactgtaaaaaaagcaggacctaatttaggccgtcagtttttt
gtatgtgcccgtccacaaggtcatgcctccaatcctcaggccagatgtaatttttttgcc
tgggttgataaagggaagtag
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