Paramisgurnus dabryanus (large-scale loach): 135729379
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Entry
135729379 CDS
T10799
Symbol
rbm15
Name
(RefSeq) RNA-binding protein 15
KO
K13190
RNA-binding protein 15
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135729379 (rbm15)
03041 Spliceosome [BR:
pdab03041
]
135729379 (rbm15)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
135729379 (rbm15)
Spliceosome [BR:
pdab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135729379 (rbm15)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
Nup35_RRM_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
135729379
NCBI-ProteinID:
XP_065103068
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All DBs
Position
11:complement(14838010..14843061)
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AA seq
853 aa
AA seq
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MKGKERSPVKKRSRALDDVRDRGGSHPTSKKMGVLSISGGGSNNGNSSSKSDGSSARRGL
VGDKRDSRDFDGHVSSRTGNNHGYTSPVASSSGKNHASSLSGEAAARSNSRGESRAPLPT
NESEYKTLKISELGSQLSDEEIEDGLFHEFKKFGDVSVKISRVNDERIAFVNFRRPDDAR
AAKHARGRLVLYDRPLKIEAVYLNRRRSRSPVDKDHFSVVAGHRHLHTQRPISPTGLGYR
DYRLQQLALGRLPPPPPPPLPRELEREFAFYEARARPTAYIAERAASFREEDFISPEDDQ
RANRTLFLGNLDITVTENDLRRAFERFGTITEVDIKRPTRGQSSTYGFLKFENLDMAHRA
KMSMSGKVVGRNPIKIGYGKATPTTRLWVGGLGPWVPLTALAREFDRFGTIRTIDYRKGD
AWAYIQYESLDAAQAACTHMRGFPLGGQDRRLRVDFADTEHRYQQQFLQPLPLQHYEIVA
ESFVHRATPEAIRVRERTPPPLHFRERELYAGAEWPAPAIRERVRNPAFEPLEHLERERR
REAWSLERELPGREPGRKRRLLEDGRHLECSPDSSSEWAARRRRPPSLEGSPGGSSRDGR
FSDSERPVRGDRASPVRERRSSLDRASGEKRIKNSSSLSESSVGVSPAERKRKAGDSAKG
ASKRDRSESSSKGSQASKQEAGGKLSMAWNGMLLLKNSNFPASMHILEGDLNVATSLLID
GSTGGKVSQLRITQRLRLDQPKIDEVSRRIKVAGPGGYAVLLAVPGSTEETSSSDPAAST
QRPLRNLVSYLKQKQAAGVISLPVGSSKDKDNTGVLHAFPPCDFSQQFLDSSAKALAKTE
EDYLVMIIVRGAS
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaaaagagcggtcgccagtgaaaaaacgttcaagggccttggatgatgtacga
gacaggggaggaagccacccgaccagtaagaaaatgggggttctctcgatttctggtggc
ggaagcaacaacggtaacagttcgtctaaaagcgacgggagttctgcaagacgaggatta
gttggagacaaaagagacagccgagatttcgacggacacgtatccagtcggactggaaat
aatcacggttacacaagccccgtagccagctcgagtggcaagaatcacgcctcgagccta
tctggagaggcggcagcgcgcagcaactcacgcggagaatcgcgcgcgccacttcccaca
aacgaaagtgagtacaaaactttaaaaatcagcgagcttggctcccaactaagcgatgag
gaaatagaggacggactttttcacgaattcaaaaaatttggtgacgtgagtgtgaaaata
agccgagtcaacgacgagagaatagcatttgttaacttcaggagacctgacgatgccagg
gctgctaagcacgcacgaggccggctggtactgtacgatcgtccattgaaaattgaggca
gtgtatttgaacaggaggagaagtcgctctccggtagacaaggaccatttctctgtcgtc
gcaggccatagacatttgcatactcaaaggccgatctctccgactggcctgggctacagg
gactacaggttacagcagttagcccttggtcggcttcctcctcccccaccccctccttta
cccagagagcttgaaagagagtttgccttttacgaagcaagggcaaggcctactgcgtac
attgctgagcgggctgcttctttccgcgaggaggactttatctctccagaggacgaccag
agagccaaccgcacactgtttctgggtaatttggatattactgtgactgaaaatgactta
aggagagcctttgaaagatttggaaccatcaccgaggtggacattaaaagacccactcgg
ggccagagcagcacctatggttttcttaaatttgagaacttggacatggcccatagagca
aaaatgagtatgtctggaaaagttgtaggccgaaaccccataaaaatcgggtatggcaaa
gcaacccccaccacacgcctttgggtgggtggtcttggaccctgggttcctcttaccgca
ttagcgagggaatttgaccgctttggcactattaggactatagactacagaaaaggcgat
gcctgggcttatattcagtatgaaagcctggatgctgcacaggcggcctgcacacacatg
cggggctttcctctcggcggtcaggacaggaggctgagggtggacttcgccgacacggag
caccgctaccagcagcagtttctgcagcccctccctttgcaacactatgaaattgtcgcc
gagtcctttgttcaccgtgccacccctgaagcaatcagggtcagagaaaggacacctcca
ccactgcacttcagagaacgcgaactgtacgctggggccgagtggcccgcacctgccata
cgtgaacgtgtgagaaatcctgcatttgagcctcttgaacacttggagcgtgagcgtcgg
cgagaggcttggtctctggagcgggagctgccggggagggaacccggtcgcaaacgcaga
cttctggaggatgggagacatcttgagtgctcacctgacagcagcagcgaatgggcagcc
cggcgtcggagaccaccttctctcgagggtagcccgggcggtagcagccgtgacgggcgt
ttcagtgactcagagcggccagtgagaggagatcgagcatccccggtgcgagagagacgc
agcagcctagatcgagcctctggtgagaaacgcatcaaaaacagcagcagcctatcagag
tcaagtgtcggagtgagtccagcagagaggaaacgcaaagcaggcgattcagctaaaggt
gcctccaaaagagacagatctgagagcagctccaaaggcagccaggcctcaaagcaggaa
gcaggtgggaagctgagcatggcctggaatggtatgttactacttaaaaacagcaacttc
ccagccagcatgcacatcctggagggagatctgaacgttgccaccagtctccttatcgac
ggcagcacaggcggaaaggtcagccagctacgcatcacacaacgccttcgcctcgaccag
cccaagatcgacgaagtgtcgcgccgcatcaaagtcgcaggcccaggtggatatgcggtt
ctactggcagtaccgggcagcactgaggagacctcgtcttcggaccctgcagcttcaaca
cagaggccccttcgcaacttggtttcgtacctgaagcaaaagcaggcagctggggtcatc
agtttacctgtcgggagcagtaaagataaggacaacactggtgtcctgcacgcatttcca
ccctgtgatttctctcagcagttcttagattcttctgcgaaagctcttgccaaaacagaa
gaggactacctggtcatgatcattgttcgaggagcatcttaa
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