Paramisgurnus dabryanus (large-scale loach): 135729566
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Entry
135729566 CDS
T10799
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135729566 (gapvd1)
Membrane trafficking [BR:
pdab04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
135729566 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
135729566
NCBI-ProteinID:
XP_065103369
LinkDB
All DBs
Position
11:complement(19960241..19999645)
Genome browser
AA seq
1487 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLLQRLNNEVLKTAEKLYRAAWIAKQQRINLDRLIL
TSAEASPAECCQHAKVLEDTQFVDGYKTLGFQESIYGEFLGRLRENPRLVASCLVAGERL
NHEHTQGVIHTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKENDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKLIDRFTPAQQERLFGEKGT
EEYRRKVQAAVEANEAKLVTLVNSFIGYLKQNTYCFPQSLRWIVSQMYKTLARVERLEVG
EVRKMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMSDADDGD
PRRKSSLLKFDKTCVAAFLDVVIGGRAVETPPMSSMNLLEGLTRTVVYLTHNQLLALLDF
VRAVTAGDQLREEDHLALETLLINVPQSRTIKSNSLELTPSNTPQLSPATTPANKKNRLP
IGQQLAAMTCWEPSATGLSAHIPLVTPFAGSRSRSRSNMAQDGETEASSQESLQEVAPED
VLVISFGTSLQTIPGMMSENEVLTLHLGDGGQGDTPADDTKQHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEVESVSEGGPGPSGSNGAEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIVGAAAEHALGSMLCLPV
LLDPYGSTISETTSEAWSVEVLPSDSEAADLKEERLQELESCSGVGSTSDDTEVREVSSR
PSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEDSAHGAHGLSCAAS
QADSLLAMFDPLSSGEGSSTGTIVRPKVHYARPAHPPPDPPIPEASVTGNQEPRPPLFAP
HLVDLEHPKQRHSYPERLVRSRSTDVVSAGRRPNSDPGLNRRTMMEERDPAGTFSTGPTS
SPSKDSLKGGESEDRKDSDDEKSDRNRPWWKKRFVPAIPKVLYWTAEGELPVPIGGLRKR
DKPEKDDQGAERIPQGLSDEPSMFRQSSKTQSAEAIMDKYIKYMEKRPAPSDGAVAGPYG
GQESCREGDSEHDSPKDEGLQNISADDLPDSASQTAPPQDKSFSFSDIKKKLRMALCSAD
SVVFPIIPPATTRNGLPDHADPEDNEIVWFLKVQLAEAINLQDKNQMAQIQETMRCVSHL
DPRTCRKLLTAMAEDYRKRAPYIAYLTRCRQGLQTSQAHLDRLLQRVLRDKEVANRYFTT
VCVRLLLEHMESKMLDFIKAFQGCTAADDKTAAVEDFLRYLYGAMAHDAIWQYASEEQLQ
DAQMAIERSVMNRIFKLAFYPNQDGDILRDELYLEHIQRLSKVVTANHRALQIPEVYLKE
APWPSAQAEIRTINAYKTPRDKVQCILRMCSTIMNLLSLANEDAVPGADDFVPVLVFVLI
KANPPCLLSTIQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacattcacactctggcccaccacctgaagcaggagcggctgtatgtt
gcgtctgagaaacagctcctccagagactcaacaatgaggtgctgaagaccgctgagaag
ctctacagggcggcctggatcgccaaacagcagaggatcaatcttgaccgcctcatactc
accagtgcagaggcgtccccggcagaatgctgccaacatgccaaggttctcgaggacaca
cagtttgtggatggttataaaacgctgggctttcaggagagcatctatggggagttcctg
ggccggctcagggaaaacccacggctggtggcctcatgtcttgtggcaggagagagactg
aaccacgagcacactcaaggagtcatacacacagtcttcacatcactctatggcaactgc
atcatgcaagaagatgaaagctacctgctgcaggtgctccgttatctggtggaattcgag
ttaaaggagaatgacaacccacgacgcttgctgaggcgaggcacgtgtgcattcagcatc
ctttttaagctgttctccgagggcctgtattctgccaagctcttcctcaccgccaccctc
catgagcccataatgcagcttctggtagaggatgaggaccatttggagacggaccccgct
aaactgatcgaccgcttcaccccggctcagcaggagcgtctattcggggagaagggtaca
gaggagtaccgcaggaaggtccaagcggcggtggaggccaatgaggccaagctggtgacc
ctggtcaactccttcattgggtacctgaagcagaacacctactgtttcccacagagcctg
cgctggattgtgtctcaaatgtataagacactggcacgggtggagaggttagaggtcgga
gaggtgaggaagatgtgcactgacctgctgctcacgtgtttcatctgcccagccattgtc
aaccctgagcagtatggcatcatctcggacgcaccaattaatgaggtggcacgcttcaac
ctcatgcaggtggggcagttgttgcagcagttagccatgtctgatgcagatgatggggat
cctcgacgtaaaagcagcttattaaagtttgataagacatgcgttgctgcctttttggat
gttgtaattggtggacgagctgtcgagactcctcccatgtcttcaatgaatttactggag
ggcctgacgcgtactgtggtttacttgacacacaatcaacttttggctttgttggacttt
gtgcgtgcggtcacagcaggagatcagctcagagaagaggaccacctggctctggagacc
ttgctaatcaatgtacctcagtcccgcacgataaagagcaacagcctggagctcacaccc
tctaacactccccagctttccccagcaacaacgccggccaacaaaaagaacagacttccc
attggacaacagctggctgccatgacgtgttgggagccctcagccactggcctgtccgct
catatacctttagtaaccccgtttgcaggctctcgcagccgaagccgatccaacatggcc
caggacggtgagactgaagccagttcccaggagtctctgcaggaggtcgcacctgaagat
gtactggtcatctcattcggcacctcactgcagaccataccggggatgatgtccgagaac
gaggttctaactttgcatcttggagatggggggcaaggagacaccccggccgatgacacc
aaacagcatgggaaacctgacaaaacgctgcgcttctcactctgtagcgacaacctggag
ggcatttctgaggggccgtctaaccgctccaattcagtttcctcgctggacctagaagtg
gagtctgtgtctgaaggaggaccggggccctctggcagtaatggtgcagaggccttgcag
cttctagaacatgaacaagctaccactcaggataatttggacgataaactacggaagttt
gaaattcgggacatgatgggtctgacggatgatcgggacatttctgagacggtcagtgag
acctggagcactgacgtgctgggcagcgactttgatcccaacatggatgaggacagattg
caggagatagtgggggctgcagcggagcacgctttggggagcatgctttgtctgccggtt
ctcctggacccgtacggttccaccatctctgaaacgacgagcgaggcatggagcgtggag
gttttgccgagtgactccgaagctgcagatctgaaggaggaacgcttgcaggagttggag
agctgctcgggtgttggtagcacctcagacgacactgaggtcagagaggtcagctcccga
cccagcaccccgggacttagtgttgtttcaggcatcagtgccacgtcggaggacatcccc
aataagattgaagatctacgctcggagtgcagctcagactttggaggcaaagactccgtg
accagtccagatggagaagactctgctcatggcgctcacggtctgtcctgcgcagcctca
caagcagattcactgctggctatgtttgatcccctctcctctggtgaaggttcttccacg
ggcaccatcgtacggcccaaggtacactatgcccgccccgctcaccctccccccgaccca
cctattccagaggccagcgtaacgggcaaccaggagcctcgcccgcctctgtttgccccc
catctggttgatttggagcatcccaagcagagacactcttaccctgaaaggctggtaagg
agccgcagcacagatgtggtgtccgctggccgcagacccaacagtgaccccgggctgaac
cgcaggaccatgatggaggaaagagaccccgctgggactttttccacagggcccacttct
tctcctagcaaagattctctcaaaggaggggagtccgaagacaggaaagacagtgatgat
gagaagtctgacaggaacagaccctggtggaagaagcgctttgttcctgccattcccaaa
gtgctctattggaccgcagagggtgaactcccagtgccaattggtggactccgaaagcga
gacaaaccagaaaaggacgatcaaggagcagagaggatcccacaaggtttatcagacgag
ccctcgatgtttaggcagagctccaagacgcagtcagcagaggcgataatggacaagtac
atcaagtacatggaaaaacggcccgcccccagtgatggagcagttgcaggaccttatggt
ggacaagagtcatgtagagagggagacagcgaacacgactcgccaaaagacgaaggtcta
cagaacatctcagccgatgacctaccagactctgccagtcagacggccccacctcaggat
aaatcattttcctttagtgatatcaaaaagaaactacggatggctctgtgctcagcggat
tcggtcgtatttcccatcattccccctgcaacaacacgcaatggtctcccagaccacgca
gatcctgaagacaacgagatcgtgtggtttctgaaggtgcagctggcggaggccattaac
ctgcaggataagaaccagatggctcagatccaggagactatgcgctgcgtcagccacctc
gacccccgcacctgcagaaaactgctcactgccatggcagaggactacaggaagcgggcc
ccgtacatcgcctatctgacacggtgccggcagggcctgcagacgtctcaggctcatctg
gacaggctcctgcagagggtactaagagataaagaagtggccaaccgttatttcaccacc
gtctgtgtacgactgctcctggaacacatggagtccaagatgctcgacttcatcaaagcg
tttcagggctgcacagcagctgacgataagactgcagcagtggaggatttcctgcggtac
ctgtatggtgccatggcccacgatgccatctggcagtacgccagcgaggagcagctccag
gacgcccagatggccatcgagcgcagcgtcatgaaccgcatcttcaaactggcattctac
cccaatcaggacggtgacatcctcagagacgagctttacctcgagcacattcagcgtctt
tctaaagtggtgacagccaatcacagggccctgcagatcccagaggtgtatcttaaggag
gcaccatggccctcagcgcaggccgagatcaggactatcaacgcttacaagaccccacga
gataaagtgcagtgtatcctgcgcatgtgctccaccattatgaacctgctcagtctggcc
aatgaggacgccgtacctggagctgatgactttgtccccgtgctcgtctttgtcctaatt
aaagcgaacccaccctgccttctgtccaccattcagtacatcaataatttctacgccagc
aggctgagcggggaggagtgctattggtggatgcagttcaccgccgccgtggaattcatt
aaaaccatcgacgatcgcaagtga
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