Paramisgurnus dabryanus (large-scale loach): 135729635
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Entry
135729635 CDS
T10799
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135729635 (hnf1a)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
135729635 (hnf1a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
APP1_cat
HTH_5
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
135729635
NCBI-ProteinID:
XP_065103510
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Position
11:complement(22428144..22437647)
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AA seq
556 aa
AA seq
DB search
MEGGEERKAGERRGRLSALQEQLVWSLLGSGLSKELLIQAMGDLESERASGGVERTDRAD
GESSEEGEMDNPPPIFRELERLPPEEAARQRAEVDQLLQEDPWHVAKMVKTYMQQHNLPQ
REVVESTGLNQSHLSQHLNKGTPMKNQKRASLYSWYVKKQAEISQQFTNATRGVMSGEES
GEDGRKGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECNRAECLQRGVSPSQLA
GLGSNLVTEVRVYNWFANRRKEEAFRHKLALDVPYSTHSALSSSQTLSSSPSPGLKYSQS
VVCESLGSVRTSTGEDRTGSSRLVSSPVQLEPSHTLLDTHHHKPVSGGGSLPPVSTLTSL
HGLSGSSAHPQGLIMASLPSVMSLGDSSLLIGLTSSQPQTVINNVGGGFTTLQPISFQQQ
LHSSPQQQLQSHFGPSSFMTTMAQLPCHMYSKADLSSYSSSNLLSQAMVIAEGNSIGTLT
NLTAVRQIFTSDPEGHDDNQEESLHLQSTSPEPVSSSSLELYSQTQTSETHSTHLLSTSP
SDIEPYIPGQMVSSEQ
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggcgaggagaggaaggctggagaacgaagaggtcgcctgtcggccttgcag
gagcagctggtatggtctctactgggctcggggctttcgaaggagttgctgatccaagcc
atgggagatcttgagagtgagagagcttcgggcggtgtggagaggacagaccgggccgat
ggggagagctcagaggaaggtgagatggacaatcctccccccatcttccgcgagctggag
agacttccaccggaggaggcagcgagacagagagctgaagtggaccagttgttgcaagag
gatccatggcatgtagctaaaatggtaaaaacatacatgcagcagcacaacctcccgcaa
agagaagtggtagaatccaccgggctcaaccaatcccatctctcccagcacctcaacaaa
ggcacacccatgaaaaatcaaaaacgtgcctctttatatagctggtatgtcaagaaacag
gcagagattagccagcaattcaccaatgctactcgaggtgttatgtccggagaggaatct
ggggaggatggacgaaaagggcggaggaatcgttttaaatggggccccgcctctcagcaa
atcctattccaggcttatgaacgacaaaagaaccccagtaaagaggagagggaggcattg
gtggaggagtgcaacagagcagagtgtctacagagaggcgtttctccctctcagctggct
ggcctgggctctaatctggtcacagaggttcgtgtatataattggtttgccaatcggcgc
aaagaggaggcttttcgtcacaaactggcactagacgtgccgtacagtacccactcagca
ctctccagcagtcagacactatcatcaagtccttcaccaggtctgaagtacagccagtca
gtggtgtgtgagagtttgggctcagtgagaacctccactggggaagacaggactggtagt
agtcgccttgtatccagtccagtccagttagaacctagtcatacactcctggacacacac
catcataaaccggtatccggcggtggttccttacctcctgtcagtactctcacttccctt
cacggactgtcaggatcatccgctcaccctcaagggctaatcatggcctccttgcccagt
gttatgagtctgggagactcttcacttctcataggcttgacgtcctctcaaccacaaaca
gtcatcaacaatgtgggtggtggctttaccacccttcagccaatctcttttcagcagcag
cttcacagctcacctcaacagcagcttcagagtcactttggtccaagctcgttcatgaca
acaatggcccaattgccatgtcacatgtacagcaaagcagatctgagctcttactcctcc
tctaacctactgtcccaggcaatggtcatcgcagagggtaacagcattgggacgctgact
aacctcacagctgttcggcagattttcacctcggatcccgaaggtcacgatgataatcaa
gaggagtccttacacctgcagtccacttcaccagagccagtgtcttcaagcagtttggag
ctatactctcagacccagactagcgaaacccattctactcacttgctctccacttcacca
agtgacatagagccttacatcccgggacagatggtgtcaagtgaacaataa
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