Paramisgurnus dabryanus (large-scale loach): 135729706
Help
Entry
135729706 CDS
T10799
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdab01002
]
135729706 (adamts13)
Enzymes [BR:
pdab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
135729706 (adamts13)
Peptidases and inhibitors [BR:
pdab01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
135729706 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
ADAMTS_CR_3
TSP_1
Reprolysin
ADAMTS_CR_2
TSP1_CCN
TSP1_spondin
Adt-1
Reprolysin_5
Reprolysin_3
Reprolysin_4
Reprolysin_2
Peptidase_M10
Motif
Other DBs
NCBI-GeneID:
135729706
NCBI-ProteinID:
XP_065103607
LinkDB
All DBs
Position
11:24471817..24500075
Genome browser
AA seq
1549 aa
AA seq
DB search
MGTLVWLFLVPGFLGTTALISQSTLQKDFLQSLKPQDLFYYFDTISPKSVPQFELVWVNC
SRNESSNGLWRCSFDSQEESFDLGQHRGEPPVSCPSNLEMVINSTVSVVKKREVMCCEQL
KLLRPAHTRTLLPVCHGKLQGLIQSGESRLYIRPMLQKHIDSLQNFTMDLPFGIPHLLQT
HNLPVKTHLKQPKSQFRLRRTALGSEVTHLELAVVVGPDVYSLHRQDTERYILTNLNIAS
ELLREVTLGANIRLHLVRMVILTEPEPEIQISENITSSLQSVCKWGQKVNPDADTDPLHA
DLLLYITRFDLVSPNGNKLVRGVTQLGGVCSTQWNCVITEDTGFDLGITIAHEIGHSFGI
NHDGLDNTCSSSGFMMASDGGYNSVDLTWSQCSRAQLHNFFSAGKAECVKDVPVLEGSVQ
DWRPGLFYGVDDQCRIAFGSSATACSFTDDDMATCRVLSCHINPRERTTCTRLLVPLLDG
TECGISQWCLKGRCVSPSTLGSSMVVHGSWSSWSDFSPCSRTCGGGVTHRKRQCNNPRPA
FGGIVCKGHDTEAELCNRQPCKTTQLEFMSQQCSATDQQPLSVSVDSTSVYTWIPAIGYS
TGDSQCKLMCRSREQDFMVSRGSHFIDGTRCEAGNSASLASINACLGGKCQPFGCDGVMH
SGKVEDVCGVCGGDGSTCRIISGTFSGGEAREYITFLTLPMNASHVHVINRKPVFTHLAV
LINDKYVVAGDGNPALAITYPSPLEKSPIQYRLDLTPDHLPNTEELIISGPVTDKIHIQV
YCKYGREYGDLTSPNISYQYYSSDTVSVAANGRWSTVLSPCSVTCGTGIQKISQICVDES
THENLENNLCSSSSPAPDLLQPCFLPDCPPSWEIGEFGPCSAPCGEGEQVRTVTCFQKRG
TQKVELPDSECTHESKPTTTETCNLLLCPARWQVSEPGECSAVCGPGDARRKVLCVRSHR
GSDSEVDQSLCFEPKPSEHVPCVVDVCPVGWDTQREVQLTHKDYNGVMPRSRMVPVYVWS
PVIGQCSKTCGNGSQLVWFSCVDHQSRLNVPEFLCDRNNKPEPYNQPCSQPQCPAARWGY
IQGVCSVSCGGGVARRVLYCFQKGDGHRDVLVGKSACQFVPRPSAVVECNTEACPARWQV
GDQGECSVSCGMGVAMRSVLCVQYEGGVERVLEDDRCESGRKPPVAAPCYTQACSFQWVV
NNWTECSVSCGYGIQSRTVSCMGPSSPLPVTPFLCLHLPKPITIQACYSSDCSSVQSSTP
EPNITHSELSETLEGERVWKAPDVPTTTPAPSHITKKKSFLRIVPTVQVMGNTMAIPTEP
SQTSFCGRLLLQDSGTIDLRNVTQKRCMFAIGRPLDELIQIKIISSSLNCQQKDNIAMYD
RLILMRLCERTHGKTVQSRSNVLLVRQSHLTPGNGVVLFYQSVKNKKSHHGECDVQLFSP
SGLIENPIKSLSTSLSNTRGCRVFIDAPPASRIQIKALSVFNKTDTNSTYILIRDVDALK
TTVFRGTQLFLWSSSGSRAEVEFHGEYQRIKGMFRAEYSHISASEEELV
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atgggaactcttgtatggctttttctagttccaggttttttaggaacaacagctctaatt
tctcaatcaactttgcaaaaggattttttacagtcactgaaacctcaagatttattttat
tattttgacactatttctcctaaatcagtgcctcagtttgagttggtttgggtgaattgt
tcgagaaatgagtcctccaacgggttgtggaggtgctcgttcgattcccaggaagagagt
tttgatttgggacaacacagaggtgaaccaccagtgtcctgtccttctaatctggagatg
gttatcaattcaacggtcagtgtggtgaagaagagagaagttatgtgctgtgagcagctg
aagttactgagaccagcacacacaaggactctgctcccggtctgccatgggaaattgcaa
ggtctgatacagtcaggggaaagcagattgtatattcgcccaatgcttcaaaaacacatt
gacagcctgcagaactttaccatggatttgccctttggtatacctcacctgctacaaacc
cataatttacctgtgaagacacatctgaaacagcccaagagtcagttcaggctacgcaga
acagctctcgggtcagaggtcacacatctggaactagcagtggtggtgggtccagacgtc
tatagtttacacaggcaagatactgagagatacatcctcaccaacctcaacattgcctct
gagcttttgagagaagttaccctcggtgccaatataagacttcaccttgtccgtatggtt
attcttacagagccagagccagagatccagatctccgaaaacatcacatcttctttacaa
agtgtgtgtaagtggggtcaaaaggtcaaccctgatgctgacactgaccctttacatgca
gatctactgctgtatatcaccaggtttgatctggtttcacccaatgggaataagcttgta
agaggtgttactcagttgggcggagtctgttccacccaatggaattgtgtgattacagaa
gatacgggctttgatcttggcatcaccatcgcacacgagattggccacagttttggcata
aatcatgatggacttgacaacacatgcagctctagtgggtttatgatggcatctgatgga
ggttataacagtgtagatctcacctggtcgcagtgtagcagagctcaactccacaacttc
ttcagtgcaggtaaagcagaatgtgtgaaggacgtcccagttctggaaggttctgtacag
gattggaggcctggtctcttctatggtgtggatgatcagtgtcgtattgcattcggcagt
tcagccactgcttgctctttcactgatgatgatatggcaacctgtcgtgttctgtcctgt
catatcaacccacgtgaacgcactacttgtactcgcttgcttgttcctcttttggatggg
acagaatgtgggatcagccagtggtgtttaaagggtcggtgtgtttctccttcaaccttg
ggttcctccatggtggtccatggctcctggtcttcctggtctgatttttctccttgttca
cgaacatgtgggggaggcgtcacccaccgcaagagacagtgtaacaaccccaggcctgcc
tttggtgggatcgtttgtaaaggccatgacacagaagctgaactttgcaaccgccagcca
tgtaagacgacacagttggagtttatgtcacaacagtgttcagctacagatcagcagcct
ttatcagtgtccgtagactccacttcagtctacacctggatccctgccatcggctacagc
acaggtgattctcagtgtaaactgatgtgtcgttcacgggaacaagactttatggttagt
cgtgggtctcacttcatcgatggtactcggtgtgaagctggtaactctgcatcgcttgct
tccattaatgcctgtctaggtggaaagtgccagccatttggctgtgatggagtaatgcat
tccgggaaggtggaggatgtgtgtggggtctgcggaggagatggctccacctgccgaatt
atctcaggcacattttcaggtggagaggctagagagtatatcacattcctcacccttcct
atgaacgcctctcatgttcatgtgattaacagaaagccggtttttacacaccttgcggta
ttgataaatgataagtatgtggtggcaggagatggaaacccagctctggcgatcacatac
ccctcacctctggagaaaagtcccatacagtatcgtctggatctcacacccgaccatcta
cctaatactgaagagctgatcatctctggaccagtcacagataaaatccacatacaggtt
tattgtaaatatggaagagaatatggagacctcaccagcccaaacatttcataccagtac
tactcttctgatactgtttctgtggctgctaatggtagatggtccactgtcttatctccc
tgctcagttacctgtggcacaggcatccagaaaatcagtcaaatctgtgtagatgagagc
acacatgagaatctagaaaataatctctgcagttcatcgtctccagcaccggatctactg
cagccatgcttccttccagactgcccacccagctgggagataggtgagtttgggccctgc
agcgccccctgtggtgagggagagcaagtgcgcactgtgacttgttttcaaaagcggggt
acacaaaaagtggagctgcctgactcagagtgtacacacgagtctaaacccacaactacc
gagacctgcaacctcctactctgtcctgccagatggcaggtgtcagagcccggtgagtgc
tcggctgtgtgtggacctggagatgcccggagaaaagttttgtgtgtccgctctcaccgt
ggatctgattcggaggttgatcaaagcctgtgtttcgaacccaaaccttcagaacatgtt
ccttgcgtggtggacgtttgtccggtcggatgggatacacagagagaggtccagttgacc
cataaagattacaatggagttatgccccggtccagaatggttcccgtttatgtctggagc
cctgtgattggccaatgctctaagacatgtgggaatggatctcaactggtttggttttcc
tgtgtggatcaccagtcacgcctaaatgtcccagaattcctctgtgatcgtaataataaa
ccagagccttacaaccaaccctgtagtcagccacagtgtcctgcggctaggtggggctac
atacagggtgtatgcagtgtgtcttgtggaggtggtgtagcgagaagagtattgtactgc
ttccagaaaggagacggacacagggatgtgttggtcggaaaatccgcctgtcaatttgta
cctagaccttcagcggtagtggagtgtaatactgaagcctgtccagctaggtggcaggtt
ggagatcagggcgagtgttcggtgtcttgcgggatgggtgtggctatgaggagtgtgctc
tgtgtccagtatgagggaggtgtagagagggtcctggaggacgacaggtgcgagtccgga
aggaagccaccagttgcggcaccatgttacacacaggcctgctctttccagtgggttgtg
aataactggactgagtgttcagtgtcatgtggttatggcatccagtctcggactgtgtcc
tgcatgggtccatccagccctcttcctgttactccttttctttgcctccatttgccaaaa
cccatcaccatccaggcctgctacagctcagactgttcctcagtccagagctcaacacca
gagcccaacatcacccacagcgagctgtcagagactctggaaggagagcgagtgtggaaa
gccccagatgtacctacaactacacctgctccttcccatatcacaaagaagaaaagtttt
ttaagaattgtacctaccgtgcaagtcatgggaaacaccatggccataccaacagaacca
tcacagaccagtttctgtgggcgactcctccttcaagactcaggaactatcgatttacgc
aatgtcactcagaagaggtgcatgtttgcgattggtcgacctcttgatgagcttattcaa
atcaaaattatatcaagctctcttaactgccagcagaaggacaatatcgccatgtatgac
agactcatactgatgcgtctctgtgagaggacacatggtaaaacagtccagtcacgatcc
aatgtattactggtgcgtcaaagccatctgacgcctggcaatggagtcgtattattttat
caaagtgtaaagaacaaaaaaagccaccatggagagtgtgatgttcagttattctctcca
tctggcctcattgaaaaccccatcaagagtctgtccacctccctctctaacactcggggc
tgccgtgtgtttatcgatgctcctcctgcttccaggatccaaataaaagcactttctgtg
ttcaacaagacagatacaaactccacatacatactgattcgggatgttgatgctttaaaa
acgaccgttttcagagggactcaactcttcctgtggagctcttccggaagcagggctgaa
gtggaattccatggggaatatcagcgaatcaagggaatgttcagggcggagtattcacat
attagtgcatctgaagaggaactagtttag
DBGET
integrated database retrieval system
