Paramisgurnus dabryanus (large-scale loach): 135730289
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Entry
135730289 CDS
T10799
Symbol
abcd1
Name
(RefSeq) ATP-binding cassette sub-family D member 1
KO
K05675
ATP-binding cassette, subfamily D (ALD), member 1 [EC:
7.6.2.4
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab02010
ABC transporters
pdab04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135730289 (abcd1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
135730289 (abcd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdab02000
]
135730289 (abcd1)
Enzymes [BR:
pdab01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
135730289 (abcd1)
Transporters [BR:
pdab02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD1 subgroup
135730289 (abcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
Adeno_IVa2
SMC_N
AAA_23
Rad17
AAA_29
BrxL_ATPase
ORC-CDC6-like
ATPase_2
Motif
Other DBs
NCBI-GeneID:
135730289
NCBI-ProteinID:
XP_065104224
LinkDB
All DBs
Position
11:complement(3714425..3737137)
Genome browser
AA seq
767 aa
AA seq
DB search
MSVYSKLPSQLQKPLARKAILLLVALYGAKKLSPYIYGRLKGKTSTQQKASDPVTSNGEA
LEVAEARKKKRGPAVNREFLERLSHLLRILFPRFFCKELILLGFHSLALISRTFLSIYVA
NLDGHIVKTIVKKDPRAFVVELAKWLLIAIPATFVNSAIRYLEGQLSLAFRTRLVTHAYM
LYFSDQTYYRVSNMDGRLANPDQSLTEDMVMFAASVAHLYSNLTKPILDVVVTCYTLLKT
AESKGANTTWPSMIAGIVVALTAKVLRAFSPRFGKLVAEEARRKGDLRYMHSRIIANSEE
IAFYGGHKIEMLQLQRSYTALSEQINLILFKRLWYVMLEQFLMKYLWSASGLVMVAVPII
TAIGYSKYDSEDVKQAALVMKEEDLVSDRTQAFTTARNLLNAAADAVERIMSSYKEVTEL
AGYTARVHEMFAVFEDVRVGVYRRSAAEIKPETSGAQEVKHGVRVEGALQIRGQVIDVEQ
GIKCENLPIITPTGDVVVSCLNIQVEEGMHLLITGPNGCGKSSLFRILSGLWPVYSGVLY
KPSPEHMFYIPQRPYMSVGSLRDQVIYPHSVEEMNEKNITDKHLEDILKTVNLCYILERE
GGWDAVNDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFEAAKDAGI
ALLSITHRPSLWKYHSHLLQFDGEGGWRFEKLDASTRISLQDEKLRLETQLSGIPKMQQR
LVELCRILGEDSSLPSTEEVEEREQQQEEDEEGEGMSAAGKGKGLME
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtattcaaaactgccctcgcagctgcagaagcctcttgcaagaaaggccatt
ctcctcctggttgctctgtatggggccaaaaaactttccccttatatatatggcagacta
aaaggaaagactagtacacaacaaaaagcctctgacccggttacctccaacggagaagcc
ctcgaagttgcggaggcgaggaaaaagaaaagaggtccagctgtgaaccgggaattcttg
gagaggttaagtcatctcttgcgaatactctttccccgttttttctgcaaagaactcatc
ctgctcggtttccactctctcgccctcatctcgcgcacttttctgtccatttacgtggca
aacctagatggccacatcgtgaaaaccattgtgaagaaagacccgagggcgtttgtggtg
gagttagccaaatggctgctcatcgccattcccgcaactttcgttaacagtgccatacga
tatttggagggtcagctcagtttggcctttcgcaccaggctggtcacccatgcctacatg
ctgtatttcagcgatcagacatactaccgcgtcagcaacatggacggcaggctggcgaac
cctgaccagtccttgacggaagatatggtcatgtttgcggcctctgtggcccatctgtac
tcaaaccttaccaagcccattctcgacgtggtggtgacttgttacacgcttctgaaaacc
gctgaatcgaaaggtgccaacactacatggccctcaatgatagctgggatcgtggtggcg
ctcactgccaaggtcctgcgagctttctcgcctcgctttggcaaactggtggctgaggaa
gcgaggagaaaaggagacctgagatacatgcattcacgcattatcgccaattcggaggag
atcgccttctatggtggtcataagatcgagatgttgcagctgcagaggagctacacggcg
ctgtccgagcagattaacctgatactgtttaagaggttgtggtacgtcatgttggagcag
ttcctcatgaagtatctctggagtgcttcaggtctggttatggtcgctgtgcccatcatc
actgctattggatactctaaatacgattcagaagatgtgaagcaggcagcattggtgatg
aaggaggaggatttggtaagcgaccgcacgcaggccttcaccacagcccgaaaccttctg
aacgctgcagctgacgctgtagagaggatcatgagctcgtacaaggaggtcacagaactt
gctggatatacggcccgtgtgcatgagatgtttgccgtatttgaggatgtgcgtgtcggg
gtgtaccggcgctcggctgcagagataaaaccagaaacgagcggagcccaagaagtaaaa
cacggcgtgagagtggagggagcgctgcagatcagaggtcaagtgattgatgtggagcag
ggcatcaaatgtgaaaacctgcccataataaccccaacaggagatgtggtggtatcctgc
ctgaacatccaggttgaagaaggaatgcatttgctgatcacaggacccaatggttgcggt
aaaagctctctgttcagaatcctgagcggactatggccggtttacagcggcgttctctac
aagccttcacctgagcacatgttttacatacctcaaaggccttacatgtcagtgggaagc
ctgcgagatcaggtcatttatcctcattctgttgaagagatgaatgagaaaaacatcaca
gacaaacatctggaggacatccttaaaactgtgaacctctgctacatcctggaaagagaa
ggagggtgggatgcagtcaacgactggaaggatgtgttgtctggaggagagaagcagagg
atgggcatggccaggatgttttaccacaaacccaaatacgctctcctggacgagtgcacg
agcgctgtgagtattgatgtggaagggaaaatctttgaagctgcaaaggatgctgggatt
gcgctactgtctattacacaccgcccttctctctggaagtaccactcccacctgctgcag
tttgacggcgagggcggctggcgcttcgagaagctggacgcctccacgcgtatctccctg
caagacgagaagctccggctggagacgcagctctcgggaattcccaagatgcagcagcgc
ctggtggagctgtgccgcattctgggggaggacagcagcctgccgagcacggaggaggtg
gaggagagagagcaacagcaggaggaggatgaggagggagaggggatgtctgctgctgga
aaaggcaaaggccttatggagtga
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