Paramisgurnus dabryanus (large-scale loach): 135730292
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Entry
135730292 CDS
T10799
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b
KO
K14966
host cell factor 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03083
Polycomb repressive complex
pdab04980
Cobalamin transport and metabolism
pdab05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135730292 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
135730292 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135730292 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdab01009
]
135730292 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdab03036
]
135730292 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
pdab03029
]
135730292 (hcfc1b)
Protein phosphatases and associated proteins [BR:
pdab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135730292 (hcfc1b)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
135730292 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
135730292 (hcfc1b)
MLL-HCF complex
135730292 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
135730292 (hcfc1b)
Mitochondrial biogenesis [BR:
pdab03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
135730292 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
135730292
NCBI-ProteinID:
XP_065104229
LinkDB
All DBs
Position
11:4034730..4053115
Genome browser
AA seq
2062 aa
AA seq
DB search
MASSGTKASGPAVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHV
YNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWK
RLKPKAPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRPG
SNIAGWDIPITYGVLPPPRESHTAVVYTEKTSKKSRLIIYGGMSGCRLGDLWTLDIDTLT
WNKPTISGTAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNL
DTMCWETILMDTLEDNIPRARAGHCSVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYLET
DRPLPPSRVQLVRANTNSLEVSWGAVPTADTYLLQLQKYDIPAATAATSPTVTPSLPVNS
PKSPVPAAAAPAAQSMPLSGVTLVPQSPSPTTSIPGSPLAASPRGPAILKVAAPHSATGA
SLVTVRQATPGAKSPVTVTSLPAGVRMVVPAQSTQGTPIGSSPQMSGMAALAAAAAATQK
IPPSSGTTVLNVPAGATIMKTVAVTPGSTTLPATVKVASPVMVTNPATRMLKTAAAQVGT
SAISTPNTPTRPIITVHKSGTVTVAQQAQVVTTMVGGVTKTITLVKSPITMGSGGTLLSS
LGKMMSVVQTKPVQTSSVTGQAGNSPVTLIQTKTPLPAGTILKLVTSADGKPTTIITTSQ
AGGTGTKPTILGISSVSPNTTNKPGTTYIKTIPMSALQQGATGVTSSGGIKSPITIITTK
MVTPGTGTPGKIITAMPKLTGTGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVSPGTVS
AGKPTVTTLVVKGTTGMTTLGTVTNTASSSVVGANASLATPATTLSTIATLSNQVPAAIT
VPAAQTSLATATIQSAPQPTTVTLITTPSGAEAQPAPDLPVSILASPTSDQPSNTGADAG
DGAGDGTATVTLVCSNPPCETHETGTTNTATTAAAKICSNPPCETHVTGTTNTATTASAN
MGAVQQVCTNPPSETHDTGTTNTATTASCNMGSTEMGTVDSKPGASTSGESTASGTDPAE
PASENGSASGSMRPENARTGTTNTSTTARSNMGSDQTGTVQSSSKSQAAISSTVMPLSTS
PSSETLETSTPDASSNVEGVKPVCSDPPSETGTTKTSTQSTSTVGSGEANVVQKVCSNPP
CETHETGTTNTPTQASSPSGAGQDGTVQRVCSNPPCETHETGTTNTPTQASSPSGAGQDG
TVQRVCSNPPCETHETGTTNTPTQSSSTMGAGQNDTVQRVCSNPPCETHETGTTNTPTQS
SSTMGAGQNDTVQRVCSNPPCETHETGTTNTPTQSSSTMGAGQNDTVQRVCSNPPCETHE
TGTTNTPTQSSSTMGAGQNGTVQRVCSNPPCETHETGTTNTPTQSSSSIGADENGTVQRV
CSNPPCETHETGTTNTATTATSSLETGDGAAEQGGEGQVDSGISSEPTSSTEPVNPATQS
RAITTVTQATPTPGPAVPEISSMASSAVVAEVPEVPGEAEAMEQTSAEAVAAEQEPMQTE
CQGELGEETAIRVVAIDESAGADEGTVLQVHVAMEAQPGQGDQAEQMDAGVEGAEAMSLA
PQDSEALALPQELMSAEGQQTTLMVTGLTPEELAVTAAAEAAAQAAASEEAQALAIQAVL
QAAQQAVLSGDAGHDQQPTTIPIVLTQQELAALVQQQQQLQEAQAAAAQQLSAEAAAAAL
PTEGLAPADSLNDPASESNGHEMAAAVTATVARLLPRASAETLAPSITFAPSQPLVVASP
AKMQAATALTEVANGIESAAGKQDAPPVVVKPPVKKENQWFDVGIVKVTNMVVTHYYVPA
DDSAVTDDDSGTVPDYSKMKKIELSPGTAYKFRVAGVNACGRGTFSEVSAFKTCLPGFPG
APCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQTVEAKVSAPAQLAFMRVYC
GPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDGSAAKPA
AKRPVSSPDMKGTGPKKARSDQ
NT seq
6189 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcaggcaccaaggcctctggacctgcggttctgcagccgcgctggaagaga
gttctgggctggtccggcccggttcctcgcccgagacacggacatcgagctgtggccatt
aaagagttgatggtggtattcggcggagggaatgaagggattgtggatgagctgcacgtc
tataacacagccaccaatcagtggtttattcctgctgtccggggtgacattcctcctgga
tgtgccgcttatgggttcgtttgcgatggcaccagacttctggtattcggtggtatggtc
gagtatggaaagtacagcaacgacctttatgaactacaggcaagtagatgggagtggaaa
cggttgaagcccaaagctcctaaaaatggaccgccaccatgtccccgtctgggtcacagt
ttttctctcgttggaaacaaatgttatctgtttggtggactggctaatgacagtgaggat
cccaaaaacaatattccaagatacctaaatgacttgtacacactggagctgcgcccaggg
tcaaacatagcaggctgggacatccccattacatacggtgtcctgccgcctcctcgtgag
agccacactgccgttgtctacacggagaaaacgtccaagaagtctcgcctcatcatctac
ggtggtatgagtggatgtcgccttggagacctctggactttagacatagatactttgacc
tggaacaaaccgactataagtggtacagctcctctgccccggagtctccattctgccacc
actataaccaacaagatgtttgtgtttggtggatgggttcctcttgttatggatgatgtc
aaagtggcaacccatgagaaggaatggaaatgcactaacactttggcatgcttaaatcta
gacacaatgtgttgggaaacaatcttgatggacacattagaggataatatcccaagagcg
agagctggacactgttctgtagctattaacaacaggctatacgtctggagtggcagggat
ggctaccgcaaagcctggaacaaccaagtttgctgcaaggatctgtggtatctggagaca
gatcgcccactgccaccgtcacgagtccagttggtccgtgccaacacaaactctcttgag
gtgagctggggggcagtgcccactgctgacacatacctgctacagctgcaaaaatatgac
atccctgctgcgaccgctgccacttctccgactgtcaccccttctctacccgtcaactcg
cccaagagtcctgtgcccgcagctgctgcgcctgcagctcaaagcatgcccctgtctggg
gtcacgctggtgccacaaagtccttcacccaccacctcaattccaggcagcccactagca
gcttcaccccgtggaccagctattcttaaagtggcagcacctcattcagcaactggggct
tcgctcgtgactgtgcgtcaggcaacaccaggggccaaatccccagtcacagttacatca
cttcctgctggagttcgcatggttgtcccagcacagagcacccagggaacaccaattggc
agcagccctcaaatgagtggcatggctgctttggctgcagcggcagctgccacgcagaag
atcccgccctcgtccggaaccactgtgcttaatgttccagcaggagccaccatcatgaaa
actgttgctgtgactccaggatccacaactttgccggccactgtcaaagtagcttcgcct
gttatggttaccaaccctgctaccaggatgctaaaaaccgcagctgcccaggttggcact
tcagccatctctacgcccaacacccctactcgtcccatcatcaccgtacacaaatctggc
acagtgactgtggctcagcaagcccaggttgtcaccactatggttggaggagtcaccaaa
accataaccctggttaagagcccaattaccatgggtagtggtggcactctgctctccagc
cttgggaagatgatgtccgtggttcagaccaaaccagtacaaacctcttcagtgactggg
caggctggaaacagtcctgtcactctaatacagacaaagactcctctgcccgctggtacc
attctgaagctggtgacatctgcagatggcaagcccacaaccatcattacaacgtcccag
gcaggaggaaccggcaccaagccaactatcctgggcatcagcagcgtctctccgaacaca
actaacaaaccaggcacaacctatattaaaaccattcccatgtctgcccttcagcaagga
gcaacaggtgtgaccagcagtggtggcatcaagtctcccatcacaattatcaccaccaag
atggtcactcctggcacgggcacaccaggcaaaatcattacagctatgcctaagctgacg
ggtacaggacaacagggggtcacgcaggtggtcttgaagggggcacctgggcaaccgggc
accatcctacgtacagttcccatgggtggagtgcggctagtttcaccgggcactgtgtca
gctgggaaaccaactgttacgacacttgtcgtcaagggcaccacgggtatgacaactctg
ggtacagtgaccaacaccgcatcctccagcgtggtgggtgccaacgccagccttgcaact
cctgctaccaccctttccaccattgctacgctgtccaaccaagttcctgcagctatcact
gtacctgctgcacagaccagcctcgccacagccacgatacaatctgctccacagcctact
acagttactttgatcacaacaccaagtggtgccgaggcccaacctgcaccggaccttcct
gtttccatcctggcatcacccacctccgaccagccctccaacactggtgcagatgctggt
gatggtgctggcgatggtacggctaccgtgactttggtctgctctaatccaccgtgtgag
acccatgagaccggaacgaccaacactgctacgactgctgctgccaagatttgttccaac
cccccgtgtgaaacgcacgtaacgggcactaccaacacagccacaaccgcctcggccaac
atgggtgctgttcagcaggtgtgcaccaacccaccttcagagacccatgacactggcact
accaacacggccaccactgccagctgcaatatgggctctacagaaatgggcacagttgac
agcaaaccaggggcttctacgtcaggtgagtccacagcttctggtacggacccagctgaa
cccgcctcagagaacggttctgcgtctggctccatgcgtcctgagaatgcccgcacaggg
accaccaacacctccaccactgcccgctctaatatgggttctgatcagacaggaacagtt
caaagctccagcaagagccaagctgcaatttcttccacggttatgcctctctctaccagc
ccttcctctgagacacttgagacgagcaccccagatgcttcatctaatgtggaaggtgtt
aaaccggtctgttcagatccaccttctgaaacgggcacaaccaaaacttctacacaatca
acctctactgtgggcagtggggaggccaatgtggtgcaaaaggtgtgctccaatccaccc
tgtgagacccacgagacgggcactaccaacacgccgacccaagcttcatcgccaagtggc
gctggacaagatggcactgtgcaaagggtgtgctccaatccaccatgtgaaacccacgag
acgggcactaccaacacgccgacccaagcttcatcgccaagtggcgctggacaagatggc
actgtgcaaagggtgtgctccaatccaccatgtgaaacccacgagactggcactaccaac
acgcccacccaatcctcatctaccatgggtgctggacaaaatgacactgtgcaaagggtg
tgctccaatccaccctgtgaaacccacgagacgggcactaccaacacgcccacccaatcc
tcatctaccatgggtgctggacaaaatgacactgtgcaaagggtgtgctccaatccaccc
tgtgaaacccacgagacgggcactaccaacacgcccacccaatcctcatctaccatgggt
gctggacaaaatgacactgtgcaaagggtgtgctccaatccaccctgtgaaacccacgag
actggcactaccaatacgcccacccaatcctcatctacaatgggcgctggacaaaatggc
actgtgcaaagggtgtgctccaatccaccctgtgaaacccacgagacgggcactaccaac
acgccgacccaatcctcatcttctatcggtgccgatgagaatggcaccgtgcaaagagtg
tgctccaatccgccctgtgaaacccatgagacggggactacaaatacagccactacggct
actagcagcttagaaactggagatggagcagctgaacagggtggtgagggacaggttgac
agtggaatcagttcagaacccacatcctctacagaaccagtcaatcctgcaacacaaagc
agggccatcaccacagtgacacaggccacgcccactccaggaccagcagtaccggagatc
tcctccatggccagttcagcagttgtggctgaggttcccgaggttccaggtgaggcagag
gccatggagcagacaagtgcagaggctgtagcagccgaacaggagccaatgcagacagag
tgccagggagaactgggtgaagaaacagccatcagggtggttgccatagacgaaagtgca
ggggccgatgagggcaccgtgctacaggttcatgttgccatggaagcgcaaccaggccaa
ggagaccaggctgagcagatggatgctggtgtggagggcgcagaagcgatgagtctcgca
cctcaggactctgaagccctcgctctaccccaggagctgatgtctgcagaaggtcagcaa
accaccctcatggtgaccggactgaccccagaggagctggctgtgactgcagctgcggag
gctgcggcgcaggcagccgcttcagaggaggcccaggccctcgccatccaggctgtacta
caggcggctcaacaggctgtgctcagtggagatgcaggacatgaccagcagccaaccacc
atccccatcgtcctgacgcagcaggaactcgcagctctcgttcagcagcagcaacagttg
caggaggcgcaggcggcagcagcccaacagctgagtgccgaagctgctgcggctgcactg
cccaccgaaggtttagcaccggcagacagcctcaatgacccggcgtctgagagcaacggt
cacgagatggcggcggctgttacagcaactgtggcccgtcttctaccacgcgcttctgct
gaaactctggccccgtcgattactttcgcaccatcccagccgttggtggtcgccagccct
gccaagatgcaagcagccacagctttgaccgaggtggccaatggaattgagtctgcagct
gggaagcaagatgcccctccggttgtggtgaagccgccggtgaagaaagagaatcagtgg
tttgacgttggaatcgtcaaagtgacaaacatggttgtcactcactattatgtgccggca
gatgattctgcggttactgatgatgattctggtacggtgccggactacagcaagatgaag
aagatcgaattgtctcctggcacagcttacaagtttcgtgtagcgggcgtcaatgcgtgc
ggccgtggaacgttctccgaggtctctgcgtttaagacctgcttacccggcttccccgga
gcaccgtgtgccatcaaaatcagcaagagccctgatggtgcccatctgacctgggagcct
ccttcagtcacatcagggaagatcatcgagtactctgtgtatctggccatccagagctca
cagacagtcgaggcgaaagtgtccgctccggcgcagctcgcctttatgcgggtgtactgt
ggacctaacccatcgtgtctggtgcagtcatctagtctctccaacgcccacatcgactac
accaccaaacccgccatcatcttccgcattgctgcacgtaatgagaagggttatggcccc
gccacgcaagtcaggtggcttcaagaaaccagtaaagatggctcggcagccaaaccagca
gcaaagagacccgtctcgtcacctgatatgaaaggcactggtccaaagaaagccagatct
gaccagtga
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integrated database retrieval system
