Paramisgurnus dabryanus (large-scale loach): 135730295
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Entry
135730295 CDS
T10799
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdab01009
]
135730295 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135730295 (hdac6)
04131 Membrane trafficking [BR:
pdab04131
]
135730295 (hdac6)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135730295 (hdac6)
Enzymes [BR:
pdab01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
135730295 (hdac6)
Protein phosphatases and associated proteins [BR:
pdab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135730295 (hdac6)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135730295 (hdac6)
Membrane trafficking [BR:
pdab04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
135730295 (hdac6)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
135730295 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
135730295
NCBI-ProteinID:
XP_065104236
LinkDB
All DBs
Position
11:4075806..4099804
Genome browser
AA seq
1095 aa
AA seq
DB search
MDSVPDLNDSGDSKGSTQSPKGTAENQRNRDDSKKSLQEARRKGKMDRSKAEEEMSRKLQ
NMDVHGKTKATGTGLVYVDAFVRYYCLWDASHPERPERVAVVMDTLDKEGLLSRCIRVEA
RAASEDELLLVHTKEYIDLMRSTQKMAYEELKTLADKYDSVYLHPELFASACLAVGSVLQ
MVDKVMTSQLRNGFCVVRPPGHHAHIDQMNGYCMFNNLAIAARYAQKRHKVERVLIVDWD
VHHGQGIQYIFEQDPSVLYFSVHRYEDGSFWPHLKESVSSSVGSGAGQGYNINLPLNKTG
MEDGDYVAVFQQVLLPVAYEFQPQLVLVAGGFDSVIGDPKGEMRVSPQCFSILTHMLKGL
AQGRLVMSLEGGYNLESTAEGVCASVRSLLGDPCPHLSSPGAPSESALKSISQAILDLYP
FWKSLQTFEGGPLSDVTPHPAPVCAEVQISSTVTGLVYDQKMMLHHNMWDSHHPELPQRI
SRIFSRHEELGLLSRCHRIPARLATEEELALCHSSKHINTIKSTEDMKPRDLHRLGNEYN
SIFISNESYKCALLAAGACFNSVQAILTDQVRNGVAIVRPPGHHAEKDKACGFCFFNTAA
VTARYAQSITNQSLRVLILDWDVHHGNGTQHMFEEDNSVLYISLHRYEDATFFPNSEDAD
YDQVGRGKGKGYNVNIPWNAGKMGDAEYLAAFHHLVMPIAREFAPDLVLVSAGFDAARGD
PLGGYQVTPEGYAHLTHKLMSLAAGRVLVILEGGYNLNSISESMSMCTSMLLGDSPPALP
GQSPLHPNAAVTINNVLRAHTPYWSSLRIQLPESVRLSLPSPKPKGKRTSVGKSKKSSRQ
STPAQSPRHQTPQHHSTPPSAALDDLTEGMLSLDLNTSASSYPSPASVPIGGARRKVKPE
RESTGQLSDSPVKLTADNTKDKDDTNAETTAVTAEAPTLKAEAMVDSGAVENQEASAPQG
ACGYTEKSVFELVCGAQDTDGETMYVVDPLSWCPHLESVRPVPAGGIDVFLPCEECGGDA
ENWICLFCYKVLCGRYVNQHMVTHGQVSGHPLVLSFADLSVWCYACESYVHNQVLYEVKN
AAHLVKFGEEMAPFS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtaccagatctaaatgactcgggcgactccaaaggttccactcaatctcca
aaagggacagcagagaaccaaagaaatagagacgacagcaagaagagcctacaggaggca
cgcaggaaggggaaaatggatcgaagtaaagcagaggaagagatgagcaggaaactccaa
aacatggatgtgcatggtaaaactaaagcaacaggaaccggtcttgtctacgtggatgcg
tttgttcgctattactgcctctgggatgccagtcaccctgagcgtcctgagagagttgct
gttgtaatggatacgctggataaagaggggttgctgtcgcgatgcattcgggtcgaggcc
agagcagcgtcggaagatgagctgttactcgttcatacgaaggagtacatagacctgatg
agatccacacagaaaatggcgtacgaagaactgaagacccttgctgataaatatgactct
gtttatctgcatcccgaacttttcgcttcggcttgtttggcggtgggatcggttctccag
atggtggataaggtgatgacatcacaactgcgtaacggcttttgtgtcgtcaggcctcca
ggtcatcatgctcacatagatcagatgaacggttactgtatgtttaataatctggccata
gctgcacgctacgctcaaaaacggcacaaagtggaacgagttttgattgtggattgggac
gtgcatcacggacagggaatccagtatatttttgaacaggatcccagtgtgctgtatttc
tcagtgcacagatatgaagacggttcattttggccgcacctcaaagagtcggtgagcagc
tctgtaggttcaggagcgggacagggctacaacatcaatctacccttgaacaagacagga
atggaagatggagattatgtggcggttttccagcaggtcctcctgcctgtggcgtatgag
tttcagcctcagctggtgttagtggcaggaggtttcgactctgtgatcggagacccaaag
ggtgagatgcgagtgagtccgcagtgtttctctattctgacccacatgctgaaaggcctc
gctcaggggcgtctagtgatgtctttggagggtggatataacctggagtctactgccgag
ggtgtttgtgcgtctgtgaggtcacttctgggtgacccttgccctcacctgtcctcacct
ggtgccccgagcgaaagtgcattgaagtccatctctcaggccatcttagacttgtatcca
ttctggaagagtcttcagacgtttgagggcggtcctctatctgatgtcacgccccatccc
gctccagtttgtgcagaggtgcagatttcttccactgtcaccggattggtttatgaccag
aaaatgatgctgcatcacaacatgtgggatagtcatcacccagagctccctcagaggatt
tcccgaatattttctcgtcacgaggagttgggactgctctcacgttgccatcggataccg
gctcgcttagcaacagaagaagagcttgcactttgccatagttctaagcacatcaacact
ataaagagcaccgaagacatgaaacccagagatcttcaccgactggggaacgagtataac
tcaattttcatcagtaatgagagttataaatgtgccctgctggccgccggtgcctgtttt
aactccgtgcaggccattctcacagaccaggtgagaaacggtgtggctatagtccgtcct
cctggtcatcatgcagagaaagacaaagcctgcggcttttgcttctttaacacggctgct
gtgacggcacgctacgcacagagcatcaccaaccaatccctgcgtgtcctcatcctcgac
tgggatgtgcaccatggaaacggcacccagcacatgtttgaggaggacaacagtgtgcta
tacatctccctgcatcgctacgaggatgcaacgttcttccccaactcagaggatgctgac
tatgatcaggtgggacgggggaaaggtaaaggctacaatgtcaacattccctggaacgct
ggaaagatgggagatgctgagtacctggcagctttccatcatctagtgatgccgatagcc
agagagtttgctccagatctggtgctggtgtctgctgggtttgacgcggcacggggcgat
ccgttaggggggtatcaggtcaccccagagggttacgctcatctcacccacaagttaatg
agtctggcagcaggaagagtgcttgtcatactagagggaggatataaccttaactccatc
tctgagtccatgtccatgtgcaccagtatgttacttggtgattcccctcctgctctgccc
ggccaatctcctcttcaccccaacgccgctgtcaccattaataatgtcctgcgtgctcac
accccctactggagctcgctgagaatacagcttccagagtctgtccgtttgtctttgcca
tctcctaaaccaaaaggcaagcggacgtcagttggtaaaagtaagaaatcttctcgtcag
tccactcctgctcagagtcccagacatcagacaccgcagcatcactcgactccgccctct
gcggccctcgatgacctcactgagggcatgctgtctttggatctcaacacgagtgcctcg
tcttaccccagcccggcgtcagttcccattggtggagccagacgtaaagtgaaaccagag
agggaatcaacaggccagttgtcagattcacctgtgaagctgaccgcagacaacaccaaa
gataaagacgacacaaatgcagaaactactgccgtgacagcagaagcacctacgctgaag
gctgaggccatggttgattcaggtgccgtggagaaccaagaggcttctgcaccgcaggga
gcgtgtggttacacagaaaaatctgtgtttgaactcgtgtgtggagcacaagacacggac
ggggagacgatgtacgtggtggatccgttgtcatggtgcccacacttggagtctgtgcgg
cccgtgcccgcaggtggcatcgacgtcttcctcccgtgtgaagagtgtggtggggatgct
gagaactggatctgtctcttttgctacaaggtgctctgcgggcgttacgtaaaccagcac
atggtgacacacgggcaggtgtcgggtcatcctctggtcctgagctttgctgacctttca
gtctggtgctacgcctgtgagtcgtacgtccataaccaggtgctctatgaagtcaaaaac
gctgctcatcttgtaaagtttggagaggagatggctcctttcagctaa
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