Paramisgurnus dabryanus (large-scale loach): 135730743
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Entry
135730743 CDS
T10799
Symbol
sf1
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 1
KO
K13095
splicing factor 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135730743 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135730743 (sf1)
Spliceosome [BR:
pdab03041
]
Complex A
Other components
Complex A specific factors
135730743 (sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
135730743
NCBI-ProteinID:
XP_065104718
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All DBs
Position
2:22644920..22655896
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AA seq
666 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDSGPGAGLMAPPGPPVSFPLQNFQPPQLTNPVFSQFP
VAVSSALSNPIGVGIQSQAGVGVGGDFGQKKRKKSRWSSETPDQKTVIPGMPTVIPPGLS
RDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKKL
EEERHSLITEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLK
NIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVDQIRNI
LKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQTTEPRSITNTTLCTKCGGA
GHISSDCKFTSSFAARPGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHSNPPPSG
PRPGGPNNNQQLQNRPPWMNSSPTDNRNYHGMHGAPGGPHNFPPPMPNMGGPPMPPNPSG
MPPPWMQPPPPPMGQGPAPPGHPMGMMPPPMGMMPPPPPPPNNQPPPPPSGPLPPWQQQA
PPPPPTSSMATSAPLPWQQNTTTTSTPATANLPPWQQPQQTATSGTQPPPPMGTPSMVPP
PPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPSFVTMMGIPGMPPYGMPPAPP
PPPPQS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggagccaacgcaaccccgctggggaagctacacccgagcatcggcgccaag
cgaggcttcgactccgggcccggtgcgggattaatggctccgcccgggcctccagtgtct
ttcccgctgcagaactttcagccaccgcaattgaccaacccagtcttttcccagtttccc
gtagccgtgagttctgctctctcaaacccaatcggagtcgggatacagtcacaggcggga
gtaggagtaggaggagattttgggcagaagaagcgaaaaaagagccggtggagcagtgag
acccccgatcagaagaccgttatcccaggcatgcccaccgttatcccacccgggctgagt
cgcgaccaagagcgtgcttatatagtccaactgcagattgaagacctgacacgtaaactg
cgtacaggagacctgggaatccctgttaaccctgaggacaggtcgccgtctcctgagccc
atctacaacagtgaggggaaaagacttaacacgcgtgaataccgcacacgcaagaaactg
gaagaggagagacattcactcattactgagatggtgggactcaatcctgaattcaaacca
cctgctgactacaaaccaccagccacacgggttagcgataaagtgatgattcctcaggac
gaatatccagaaatcaactttgttgggcttctcattgggccacgtggcaacaccctgaag
aacatcgagaaggagtgctgtgctaagatcatgattcgtgggaaaggctcagtgaaggaa
gggaaagtgggccgcaaagatggccaaatgcttccaggggaagacgaacctcttcatgca
ttagtcactgctaacaccatggagaatgtcaagaaggctgtagatcagatccgtaatatc
ctcaagcaaggcattgagacccccgaggaccagaatgacttaagaaaaatgcagctgagg
gaattggcacgacttaatggtactttgagagaagatgacaacaggatcttgcgtccatgg
cagaccacagaacctcgcagcatcacaaacacaactctctgcacaaagtgtggtggagca
ggtcacatctcctcagactgcaagttcaccagttcgtttgctgcacggcctggtgaacca
ccccagtctgctcaagataaggcacgcatggataaagagtacctgtccctcatggcagag
ctaggagaagctccagttcctagctctggagggggccacagcaaccctccacctagtgga
cctcgtccaggagggcccaacaacaaccagcaacttcagaaccgtccaccttggatgaat
tcaagccctacggataacaggaattaccatggtatgcatggggcccctggtggccctcac
aattttcctccaccaatgccaaacatgggtggccctcctatgccaccaaaccccagcgga
atgcctccaccctggatgcagccgccaccgcctccaatgggccaaggtccagcaccacct
ggacacccgatgggtatgatgccaccacccatgggaatgatgcccccacctcctcctccc
cccaacaaccaaccaccacctcctccttcaggacctctgccaccatggcaacagcaggcc
ccgcccccaccacccaccagcagcatggcaaccagcgctccacttccatggcaacaaaat
acaaccaccacatccacccctgccactgcaaacctgcctccatggcaacagcctcagcag
acagccacctcaggcactcagccccctccacccatgggcaccccttctatggtgccccct
ccacctggggtccaaccgccacttccccctggtgccccacctcctccaccaccccctcca
cctggctcagcaggcatgatgtacgcaccacctcccccgcccccacccatggaccctagc
tttgtgaccatgatgggaattcccggaatgccaccttacggaatgcccccagcacctcct
ccacctccaccccaaagttaa
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