Paramisgurnus dabryanus (large-scale loach): 135730776
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Entry
135730776 CDS
T10799
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03013
Nucleocytoplasmic transport
pdab03015
mRNA surveillance pathway
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135730776 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
135730776 (acin1b)
03015 mRNA surveillance pathway
135730776 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135730776 (acin1b)
03041 Spliceosome [BR:
pdab03041
]
135730776 (acin1b)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135730776 (acin1b)
Spliceosome [BR:
pdab03041
]
Complex C
Other components
EJC/TREX
135730776 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
135730776
NCBI-ProteinID:
XP_065104763
LinkDB
All DBs
Position
2:23556322..23593336
Genome browser
AA seq
1267 aa
AA seq
DB search
MAELEDVTLDGKPLHSLRVADLKTALEQRGLAKSGQKNALIKRLKGALMLENLQRASTQH
IGIQPNSQIGEEMSQNSFIKQYLAKQQELLRHRLEREAREATEADETPSPADPEEDEHTP
TRESTSCLPDKTEGGGVDPGGGLPQDPGSHRLDTGPAPLSHKSTENKAGKIRRTSFPRRE
EVATPSPPRAVASLSVRVVGQPEHQGLPLMMSRSQEKEGTAPAEAGPAHSVLQLSRSARA
AACVQVDSDDEEEDNDDSDDDDKWGPSSRTKKNVKALPVQPSPAAAPQRSRRKLQPPQHI
PPQPQPVHQPPLQLRQPTPPPSPPPELSFPLPDTPKQSPHDQDEPVDVGEGDVLGPGTVP
SPPNLKRQDSSSSSRSSSPEPLSRHRPGPLSLLVRKMESEGVFDGGNKVGMDGEGEMEVK
EQEEDSKAAEAPEVLILAMGTNIHTEPQNSAQQVSMSVPTVSSVKHDTENDEMKSEIRPE
GEKDEPKKGEQKENEKMDETSPSFHMTSHTTFPRKRPQIFSEVPPPESLKSPSKPEQVSV
LTAGPESSEDVAMETESSTTMPESKHSGEDKKMKVVEKPAPSAAEDSEKAASLHSSSDED
ETEKSRDADKQHSSTSRQSSPSDSDSESSSSRSSSSPLQHKSTPHGPKDKEQEIKSADNE
EKKAQSPRDIKQEALSEPAGQVSMELESRSNSVSDMQQSDHQGADASDSRPEESSAAKLV
AARKISLSTVKSENASSESESVGGTNRKRRWGSSTAVTAKKPSISITTESLKTLIPEIKP
LQEAVVELHPDEGRLSSEEDIAGPRDLKEPEEDQDLKIRRTVTQIVPSDGQENGEKKMED
DDDDGGGDDEEQKWTVREKEKPKKRESSSDATMETQEGDSKKVTPNDSLVRRSISQQKSG
VSITIDDPVRTSRDLSPPRGKTSNIIHICNLVRPFTLGQLKELLNRTGALVEEGFWIDKI
KSHCYVTYSTTEEAVVTREALHGVKWPTSNPKVLRVDFCEQNELDFHKGLLPSDRAGDGN
DPQASGTLNRPVAPPPAMPTHREKERERERNRDGGAVAVKDQWAERERAMERRERTRSER
EWDRDKVKDFGKEEKDGKRRSRSRDRRRRERGKSKEKKTEKKDKPDEPPAKLLDDLFLKT
KAAPCIYWLPLTEEQVTQRALERAERIKEREKRRKELEEEEDKKREERRERAKVRDRDGG
PTGGGDGVVGRSDEGQRDRGKERERESVREGDKRRDAQRRNRANDSRTAGGSRHSRSRSN
TSRDRRR
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactcgaggatgttacgttagacgggaaaccgcttcattcgcttcgtgtagcg
gatttaaaaaccgccctggagcaaagaggtcttgccaaaagtggacagaaaaatgcactt
attaaacgactgaaaggggctcttatgttggagaatctccagcgagcatccacccaacac
attggtattcagccgaactctcagattggagaggagatgagtcagaacagctttataaag
cagtacctggccaaacagcaggagctcctccgacatagactggagagagaagcccgggag
gccacagaggcagatgagacaccgagtcctgctgacccggaggaagatgaacacacaccg
accagggaaagcacttcctgccttccagacaagacagagggtggaggtgtggatcctgga
ggagggttgccacaggaccctggttcacacagactggatacgggccctgctcccctgtca
cacaaatcaactgaaaataaagctggaaagatcagacgtacttcttttcccagacgtgag
gaagttgccacaccatctcctccacgggcagttgcctccttgtctgtacgagtagttgga
caaccggagcatcaaggcctgccacttatgatgtctcgttcccaagagaaggaaggaaca
gccccggctgaagcaggtcctgcccactctgtattacagcttagccgttcagcaagagcg
gcagcttgtgtccaggttgatagcgatgatgaggaagaggataatgatgacagtgatgac
gatgataaatggggtccttcctcacgcacaaaaaagaatgtcaaagctcttccggtacaa
ccttccccggctgcagccccccagcgatcccgtcgaaagcttcagccaccacagcacatc
cctccccagcctcagccagtccatcagcctcctctgcaactccgccaacccactcctccc
ccgtcccctcctccagagctgtcctttcctctacccgacactcccaaacaaagcccccat
gaccaagatgaaccagtagatgtaggggaaggtgatgtgctgggaccaggcacagtgccc
tctcctccaaacctcaagagacaggattccagctccagttccagatccagcagtccagaa
cctttatccagacacagacctggtcctctgagtcttctggtccgcaaaatggagtctgag
ggtgtgtttgatggtggaaacaaggtagggatggatggagaaggggaaatggaagttaaa
gagcaggaggaggacagcaaggcagcagaagcacctgaagtactaatattggcgatggga
acaaatattcataccgaaccacaaaactcagctcagcaggtgtccatgtcagtacccaca
gtgtcctcagttaaacatgatactgagaatgatgagatgaagagtgaaatcaggccagag
ggagagaaagatgagccaaaaaaaggtgagcagaaagaaaatgagaaaatggatgagacc
tctccatcattccatatgacatcacacacaacttttccacgaaagcgaccacaaattttc
tctgaggtccccccacctgagtcacttaagtcaccctcaaaacctgagcaggtgtcggtt
cttacagcagggcctgagagctctgaagatgttgcaatggagacagagtcctccacaaca
atgcccgaatcaaaacacagtggggaggacaaaaaaatgaaggttgtggagaaaccggca
cctagtgcagcagaagatagtgaaaaagcggcatctttacactcttcatctgatgaagat
gaaacagaaaaatcaagagatgctgacaaacaacactcctcaacatcacgtcaatcatca
ccatctgactctgattcagaatcatcatcctctcgttcttcaagctctcctttacagcat
aaatccacgccgcatggccccaaggataaagagcaagaaatcaaaagcgcagataatgaa
gaaaagaaggcacaatcacccagggatataaagcaggaagctctctctgagcctgcaggc
caagtttccatggagctggagagccgctccaactcagtgagtgatatgcaacagtctgac
caccagggggcagatgcaagtgactctcgcccagaagagagctctgctgccaaattggtt
gctgcgcgcaagatctcactgagcacagttaaatcggagaatgcttcatctgagtcagag
tctgtgggtggaaccaaccggaagagaagatggggttctagtacagcagtcactgctaag
aagccatcaatcagcatcaccactgaatcacttaagacattaattccagagatcaagcct
ttgcaggaggctgtggttgagctgcacccagatgagggacgtctgtctagtgaagaagac
atcgcaggtcctcgtgacctgaaggaaccagaggaggatcaggacttgaagatcagacgc
acagtgacacagattgttccatctgatggacaggagaatggggagaaaaaaatggaggat
gatgatgatgatggtggtggtgatgatgaagaacagaaatggactgtaagagaaaaggaa
aaaccaaagaaacgtgagagctcctctgatgctacaatggagacacaagagggagattcc
aaaaaagttactcccaatgactctttggtgcggcgctccatcagtcagcagaaatcaggc
gtgtccataacaattgacgaccccgttcgaacaagtcgtgatctgtctcctccgcgtggg
aaaacatccaacatcatacacatctgcaacttggtgcgacctttcaccttaggtcagctg
aaggagctattaaaccggacgggtgcgttggtggaggagggtttctggatcgacaagatc
aaatcccactgctatgtcacatactccactacagaggaagcagtggtcacccgagaagca
ctgcatggtgtgaaatggcccaccagtaatcccaaagtactacgggtggatttctgtgag
cagaatgagttggacttccataaaggtctcttgcccagtgaccgtgcaggtgatggtaat
gaccctcaagcctcaggaaccttgaaccgccccgtcgctcctcccccagctatgcccaca
catcgcgagaaggagagggaacgtgaaagaaatcgagatggaggtgctgtggctgtgaaa
gaccagtgggcagaaagagaaagagcaatggagagaagagagaggactcgttctgagcgg
gagtgggatcgggataaggtgaaggatttcgggaaagaggaaaaagatggaaagagaaga
tcacgatcgagggaccgacggcgcagagagagagggaaaagcaaagagaaaaaaactgaa
aagaaagataaaccagatgagcctccagcaaaacttcttgatgatctgttccttaaaact
aaagcagctccgtgtatatactggttacccctcacagaggagcaggtgacacaaagagct
ctagaacgtgccgagcgcataaaggaacgagagaagaggagaaaggaacttgaggaggaa
gaggacaaaaaacgcgaagaacggagagaaagagcaaaagtccgtgacagggatggaggg
cccacagggggaggagatggtgttgtgggacgttccgatgagggacagagagacaggggt
aaagaaagagagagagaaagtgttagggagggagataaaaggagagatgcccaaagaagg
aacagagctaatgactccagaactgcagggggcagcagacactctcggagccgtagcaat
acttctagagacagacgccgttga
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