Paramisgurnus dabryanus (large-scale loach): 135731007
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Entry
135731007 CDS
T10799
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135731007 (sox1a)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135731007 (sox1a)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135731007
NCBI-ProteinID:
XP_065105018
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Position
15:complement(21142881..21146340)
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AA seq
342 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTNPGQTGPNSGSKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLGGAGGGAGVGLGVGMSPVGVGQRLESPGGHGGSTSAGYAHMNGWANGTYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGSHHHHAHHHHPHNPQPMHRYDMTALQYSPISNSQS
YMSASPSGYGGISYTQHQNSSVASSATIGTLSSLVKSEPNISPPVTTHSRGPCPGDLREM
ISMYLPTGETGDPSVQSRLHALPQHYQSTTAGVNGTVPLTHI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagacggacctccattcccccggaccccaaaccaacacgaat
ccggggcagacaggtccaaattcggggagcaaagccaaccaagaccgcgtaaaaagaccc
atgaatgcttttatggtgtggtcccggggccagcgcagaaaaatggcacaagagaaccct
aaaatgcataactctgaaattagcaaaagactcggtgctgagtggaaggtgatgtcagag
gctgaaaagcggccctttattgacgaagcaaaacggttgcgagccatgcacatgaaagaa
cacccggattacaaatacagaccgaggcgcaaaaccaagaccctgcttaaaaaggacaag
tactcgttggccggcggcttgctcggcggtgcgggtggtggtgcaggagttggtctcggg
gtcgggatgagtcctgtgggggtcggccagaggttggagagtcctgggggtcacggaggc
tcgaccagcgccggctacgcgcacatgaacggctgggcaaatggcacatactctggccag
gttgccgccgcagcggcagcggctgcaatgatgcaggaggcgcaactcgcttacagccag
catccaggtagtgggtcgcatcatcaccacgctcatcatcatcacccgcataacccgcag
cccatgcaccgctacgacatgacagctctacagtacagccccatctcaaactcccagagc
tacatgagcgcctctccgtctggctacggtgggatatcgtacacgcagcatcaaaactcc
agcgttgcatcctccgccaccatcggtacgctgagctcgctcgtcaagtccgaaccgaac
ataagccctcctgttacaacacattcccgtggaccctgccccggagacttgagagaaatg
ataagcatgtatttaccgaccggggagaccggtgatccgtctgttcagagcagactgcat
gccttaccgcaacactatcagagcacgactgccggagtgaacggaactgtcccattgacg
catatttga
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