Paramisgurnus dabryanus (large-scale loach): 135731041
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Entry
135731041 CDS
T10799
Symbol
trim45
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM45
KO
K12021
tripartite motif-containing protein 45
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135731041 (trim45)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135731041 (trim45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
ANCHR-like_BBOX
zf-RING_5
Invasin_D3
zf-C3HC4_4
Ig_GEX2_N
zf-RING_2
Alpha_TIF
Snapin_Pallidin
DUF2225
Motif
Other DBs
NCBI-GeneID:
135731041
NCBI-ProteinID:
XP_065105062
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All DBs
Position
15:complement(21832515..21837057)
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AA seq
585 aa
AA seq
DB search
MSLDKKHSIYENKHKAEFKNIKSSTTNGDGRQKSRAVCRVCDRMYRDPKLLPCLHTFCAD
CVRQLEPFAVRGVNGNLSPEDDTARRDSVTVLCPECDSEVDLPSSGIEGLTTDHLALDEV
FAETLLINNSVLCDLCSDGDAGKRCEVCCVNLCDFCSQAHRRQNRTSSHSIQNLQDLKSQ
GRLTRPVLCSLHPGQELRLFCEPCDLTVCLECAATFHRDHHCSPAHEVISHHGDRIRDLV
VRTLRPRLSRLEETLRRVDVSQEALQVRTDTLAGEIRAFARSYATAVEMHCRSLLRSLED
LRLQRKNQLHLQKAQLQQAVSDVRGGVDFAERLLTCGSDAEILNAKGVTMRRLMNLVESG
FDSHPMTVAHDNASSICFLPRESAGEVEGFPVVGVIHAKVVDPSKCTIQGEGVERGHEGQ
RGEFTLVCRDSSGEQMGRGGDPVLVSIVHKERKGCTVEAVVVDNGDGTYCVSYTPVEPGV
YSVWVCVKAQHVQGSPFVLNVKRKFRRHSGIFHCCSFCSSGGAKEARCGCTGTMPGGFQG
CGHGHKGHPGKSHWSCCGSVVEVSECILHNLGAVSPRGHLKTVEL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttgataaaaagcactcgatttatgaaaacaagcacaaagccgagtttaaaaat
attaaaagcagcacaactaatggagacggtaggcagaaatcgagagcagtctgtcgggtg
tgtgatcggatgtatcgcgaccctaaacttctgccctgcttgcatacattctgtgcggac
tgcgtgcgtcagctcgagccgtttgctgtgcgcggagtaaacggcaatctcagccctgaa
gatgacacggccagacgggactctgttacagtcttgtgtcccgagtgtgattcagaggtg
gacctgccttcatcggggatagaaggactgaccactgatcatctggcgctggacgaggtt
ttcgcggagactctgttgattaataacagcgttttgtgcgacttgtgcagcgacggcgac
gcggggaagcgttgtgaggtttgttgcgtcaatctctgcgacttctgcagtcaagcacac
aggagacagaaccggacctcttctcactccatccaaaatctccaggacttaaaatctcag
ggtcgtctcactaggcctgtcctatgttcacttcatcctggccaggagttacgactcttc
tgcgagccctgcgacctcactgtgtgcctggagtgtgcggccacctttcaccgtgaccat
cactgcagccccgcccatgaggtcatcagtcatcatggagatcgcatcagggatttggtt
gtcaggacattaaggcctcgtctctctcgtttggaggagactttaagacgtgttgacgta
tcccaagaggcattgcaggtgagaaccgacacgttggcaggcgagattcgggcgtttgct
cggagctacgccaccgcggtggagatgcattgccgctctctgctgcgttcactggaagat
ctgaggttgcagcgaaaaaaccagttacatctgcagaaagctcagctgcagcaggccgtg
tctgatgtccgaggtggcgtggacttcgctgaacgcttgctgacgtgcggttcagatgca
gaaattctcaatgccaagggggttactatgagaagactgatgaatctagtggaatcagga
tttgactcacacccaatgacagtcgcccatgacaacgccagcagcatctgtttcctacca
cgggagagtgctggggaagtggagggatttcctgtggtaggagtcatacatgccaaagtt
gtagatcccagcaagtgcactatccagggagaaggcgtagagcgaggtcatgaaggtcag
cgaggggagttcacgctggtgtgcagagactcctccggagaacagatgggcaggggaggt
gaccctgtgttagtcagcatagtgcacaaggagaggaagggctgcaccgtggaggcggtt
gtagttgataatggtgatggcacttactgtgtctcctacacaccagttgaaccaggtgtc
tactctgtgtgggtctgtgttaaagctcagcacgtccagggttcacctttcgtgctaaat
gtgaagagaaagttcagacgtcacagtggcatattccattgttgctctttctgctcaagt
gggggcgccaaagaggcacgctgcggctgcacagggaccatgccaggagggtttcagggt
tgtggacatggccataaaggacaccctggtaagtcccactggtcatgctgtggaagtgtg
gtggaggtctctgagtgtattctgcataatctgggtgcagtttctcctcgtggacacctt
aagacggtggagctctga
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