Paramisgurnus dabryanus (large-scale loach): 135731207
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Entry
135731207 CDS
T10799
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135731207 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135731207 (atrx)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135731207 (atrx)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
135731207 (atrx)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
135731207 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
135731207
NCBI-ProteinID:
XP_065105235
LinkDB
All DBs
Position
16:complement(6777212..6839883)
Genome browser
AA seq
2038 aa
AA seq
DB search
MSTEILRSNKLSTLVSKLHEFLGQSPDNENFESHNTKTSNGEMATSEVNTPEEKMNEPGC
SSDLTKPSSSRSKRKPSFVTKHTAVEESECATESGGEHQAGADSKQSGLDISKLPQGTVV
VKPEPVGNETKDEFKGPEFRNRGISKVKEEGARKRPEEQLQDICNCTACGQQVNHFQRDA
IFQHPALHVLICKSCFKYYMSDDISKDEDGMDEQCRWCAEGGNLICCDYCSNAFCKTCIL
RNVGRKALSEIMSEESKWHCYVCSPEPLQDLVKTCETVLLNLEHAYKKNKGDGGDKTKRE
DRKLKHGKREKASVNGQDHSSDGGGTLAFTCKTMSVPKELVKKTKKLIETTNGLNRTFVH
FLQSTSTGHEANALSYRHLRAFKSVLADLKKAHSALDESLDKEFESRGLKIQNGEEHRPP
ESQSAGKTVENSHLTEHHGVEEDGLDPTTTDHNPQMEEDNQMESDSNDVEMETLPVSPEK
AQDQSGEDEAKDHGAIADAPECENESALSGETSLDKDIVSVPPSVPEELFEMVESLAVKK
EDENNSESGDAKLTSSAGFMDSSKGLAKLGKKLVVKLTPVPLKITIKRDKSKDASLSKDV
DGNISPEEAADSRRSPRMKTTPLRKSPEAKSKSKTKSIPKDEKSDAVKERCDSDSDEVPE
VLQTAALKASSDESDAENGDCAPGKGSRKKRSSSRSNEKSVKRKLLQGSADSEASDGTSK
TKKRNGKKKKGNESDSSNHNSDLEKQMKSLSKLGSEKKTTKSGKKEKNESGKEGKKGPKR
SFERLRRSQRGKADSKQDSSSSDDDEGEPASNSGEDSDQQKIKPIIDSAMVDIDGFHQSS
GDEGDLKAESSQMVDDDDDPENRIAKRMLLAQIKANYSSGAESSSDEDNLDKEEASKKQK
EKNEKDEEEEETSDSGSDVEVKKRGKRHHLLRKKVTLSEGDSDDETTVKSNKETKKKSRR
KVGSDDSADSDFERSDSASSDGSALSEAVSTDEDGEKSNKRKTRSSKASSKDKERSYKKE
KKKRRRIKVQDSSSDEKSGGDDDEDGEGDDKGTPKGRKKIRKILKDDHLRTETRDALKEE
EERRKRIAERERLREKLRETIVLEESSQVACPITTKLVLDEDEETKEPLVQVHRNLVTKL
KPHQVDGVQFMWDCCCESVRKIEKSSGSGCILAHCMGLGKTLQVVTFLHTIMLCEKLNFS
TALVVCPLNTVLNWLNEFSKWQEGLTDEESLEVTELATVKRPQERAYALQRWQEDGGVMI
IGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHILKNEASAVSKAMNSIRT
RRRVVLTGTPLQNNLIEYHCMVTFIKENLLGSVKEFRNRFINPIQNGQCADSTPTDVRVM
KKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLAVRLTPIQCKLYRYYLEHFTNSGSG
LEGARSRTGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMEEFIASETEESSM
SLSSEDEKPKRKKKRGRGKQQSSENDSDDLEVIKEWNTSSRGGNPEGRNRAEPVEEVRPS
SNSRPGSPSPEWYKEFVTEADSEVLEHSGKISLLFEILRMAEAVEDKVLVFSQSLISLDL
IEDFLELAGRAKEEGKPSPYKGEGKWFRNLDYYRLDGSTNAMTRKKWAEDFNDTNNTRGR
LFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQVKTVFVYRFLAQGTM
EEKIYDRQVAKQSLSFRVVDQQQIERHFTMNELTELYSFEPDQLDDPSEKKSKRATPMLP
KDPILAELLHSFKDHIVGYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLTMRVNHP
SYSQMGMGSPNYFPFNVAALASMSNQQLEDLLKQGKQKVLEATSALKVVPREPLEDIIAQ
LWKENPNLPEAQIQSMALGRQANCEMELKHREAVYRDVLGKQQTLMMYVQKVLNNRKVQE
QQIAMARQGMLLNQLAMQNGLTAPMSQMELLGLYQQLGALHGLPSSQLGKNPGPSTGL
NT seq
6117 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagagatcttacggtcaaataagctgagcacactggtttctaaacttcatgag
ttcttgggtcagtctccagacaacgaaaactttgaatctcacaatactaaaacctccaat
ggtgaaatggccaccagtgaagtaaacaccccagaggagaaaatgaatgagcccggttgt
tcctcggatttgaccaagccttcatcttcacgctcaaaaagaaaaccttcatttgtgacc
aagcacacagccgtagaggaatctgaatgtgctactgaaagtggtggtgaacatcaggcg
ggagcagacagcaagcagagcggtttggacatcagcaagctaccacagggaacagttgtg
gtgaagccagagccggttggtaatgaaactaaagatgaattcaaaggtccagaatttcgt
aacagaggaataagtaaagttaaagaagaaggcgcacgaaaacgtcctgaggaacaactc
caggacatttgtaactgcacagcatgtggacagcaagtgaatcattttcagagggacgca
atctttcagcatccagccctacatgttcttatctgcaagtcatgtttcaagtactacatg
agtgatgatatcagcaaggatgaagatgggatggatgagcaatgcaggtggtgtgcggaa
ggaggtaacctgatttgctgcgactactgtagcaatgccttctgcaaaacatgcatttta
cggaatgttggacggaaagcgttgtctgaaattatgagtgaagaaagcaaatggcactgc
tatgtgtgcagcccagaaccactgcaggacttggtcaaaacatgcgagacggttttgcta
aatctggaacatgcatataaaaagaacaaaggagatggtggtgacaagaccaaacgtgaa
gatcgcaaactcaagcatggcaagcgagaaaaagcgtccgttaacggacaggatcattcg
tccgatggaggcggcacattggcctttacttgtaaaacgatgagcgttcctaaggaacta
gtcaaaaagaccaagaaacttatcgagaccacaaatggtttgaatcgtactttcgtacat
ttcctccaaagcacatcgacgggacacgaagcgaacgcgttaagctacagacacttgaga
gcctttaaatcggtattggctgatctgaaaaaggctcactctgctttggatgagtcgctg
gacaaagaatttgaatcgagaggtcttaaaattcaaaacggagaggagcacagaccacct
gagagtcagagcgcaggtaaaacagtcgaaaactcgcacttgaccgagcatcacggtgtc
gaggaagatggtttggatcccaccaccacagatcataatcctcagatggaagaagataac
caaatggaaagtgattcaaacgatgttgaaatggagactcttcctgtctcgccggaaaaa
gctcaggatcagtctggagaagatgaagccaaagatcacggggcgattgctgacgctcct
gagtgtgagaatgaatccgcgctgtctggtgaaacctctcttgataaagacattgtgtct
gtaccaccctctgttccagaggaactctttgagatggtcgagagtctcgctgtaaagaaa
gaggatgaaaacaactctgaatctggtgacgctaagttgacatccagcgctgggtttatg
gactcttctaaaggtctcgcaaaactaggtaaaaagcttgtagtcaaactgacccctgtt
cctcttaaaataaccataaaacgagataaaagcaaagacgcgtcactttcaaaagatgta
gatggtaacatatcaccagaggaggctgcggacagcagacgctcgcccagaatgaagacc
acaccattgcgcaagtcgccagaggcaaagagcaaaagtaaaacaaagtcaattccaaaa
gatgaaaagtccgatgcggtcaaggagagatgtgattcagactcagatgaagtcccagag
gtcttgcagaccgctgctttaaaggccagctcggatgagagcgacgcagaaaacggtgat
tgtgctcctggtaaaggtagcaggaagaagaggtcttcttcccgctcgaatgaaaaatct
gtgaagcgaaaacttctccagggctcggcagactcagaagcgagcgatgggacctcgaaa
acaaagaaacgaaatggcaaaaaaaagaaggggaatgagtcagactcatccaaccacaac
tcggatcttgagaagcagatgaagagcctgagcaagcttgggagtgagaaaaaaacaact
aaaagtggcaagaaggaaaaaaatgagtctggtaaagagggcaagaaaggccctaaaagg
tcatttgagcgcctacgcaggtcacagagagggaaggctgattcgaaacaagattcgtcc
tccagtgatgatgatgaaggagaaccggcttcaaactctggagaggacagtgatcagcag
aagattaaaccaataatcgactctgctatggtcgacattgatggttttcatcagtcatca
ggtgatgaaggtgatttaaaggctgaatcctcacagatggtggatgatgatgatgatccc
gagaatagaattgccaagagaatgctgctggcgcagatcaaagccaactattcatctgga
gctgaaagttcctcagacgaggacaatctggacaaagaagaagcatcaaaaaaacagaaa
gagaaaaatgaaaaagatgaggaagaggaggaaacatcagactccggctcagatgttgaa
gtgaagaagcgtggaaagcgtcaccatttgttgcgtaagaaggtcactttaagcgagggt
gactctgatgatgagacgactgtcaaatccaataaggaaaccaagaagaaaagtaggcgt
aaagttggcagcgatgattctgcagattctgactttgagcggtcagactcagcctccagt
gatgggtcagcgctcagtgaagctgtgagtacagatgaggatggagagaagagcaacaaa
cgcaaaacacgatcatccaaagcatccagcaaggacaaagagagaagttacaagaaagaa
aagaaaaaacgcagacgaattaaggttcaagactcatcctcagatgagaagagcggagga
gacgatgatgaagatggggagggcgatgataaaggaacgcctaaaggtcgcaagaagatc
cgcaaaatccttaaagatgaccacctgcggactgagaccagagatgccctgaaggaggag
gaggagagaaggaaacgtatcgctgagagggaacggttaagagagaaactcagagagacc
attgtgttggaagagtcgtcacaggtcgcgtgtccaatcaccacgaagctggtattggat
gaagatgaggagaccaaggagccactggtgcaggttcacaggaacttggtgaccaaactc
aaaccccatcaagtggatggtgttcagtttatgtgggactgctgctgcgagtctgtcagg
aagatcgagaagtcttccggctccggctgtattctggctcattgcatggggcttggcaaa
accctgcaggtggtgacgtttctccatacgattatgctgtgcgagaagctgaacttctcc
acggctctggtggtctgtcctctcaacaccgtgctcaactggctcaatgagttttctaag
tggcaggaaggcctgacagatgaagagagtttagaggtgactgagctggccacagtgaaa
agacctcaggagagagcatacgctttacagcgctggcaggaggacggtggtgtcatgatc
atcggttatgagatgtaccgcaaccttacgcagggccgaaacatcaagagcaagaaactg
aaagaaacctttcagaaaactttagttgatccaggtccagattttgtaatctgtgatgag
ggtcacattttaaagaatgaagcatctgctgtttctaaagccatgaactccatcaggact
cgacgtcgggtggtgctgacaggaactccgctgcagaacaacctcatcgagtatcactgc
atggtgaccttcatcaaggagaacctgctgggttcagtgaaagagtttagaaaccgattc
attaaccccatccagaacggtcagtgtgccgactccacccccactgatgtccgtgtgatg
aaaaaacgggctcacatcctctatgagatgctggcaggatgtgtacagagaagggactat
acagcacttacaaaatttctgccaccaaaacatgagtacgtgttggcggtacggttaaca
cctattcagtgcaagctgtatcgatactacctggagcactttacaaatagcggttctgga
ttggagggtgcacgaagccgtacagggaccaaactcttccaggatttccagatgctcagc
agaatctggactcatccgtggtgtcttcagctggactatatcagtaaagaaaacaaggga
tactttgatgaggacagtatggaggagttcatcgcctccgagacggaggagtcatccatg
agtttgtcctctgaagacgagaagcccaaaaggaagaagaaacgtggcagaggtaaacag
cagagctcggagaacgacagcgatgacctggaggtgattaaagagtggaacaccagctca
cgaggaggaaaccctgagggcaggaacagagccgaacctgtcgaggaggttcggccctca
tcaaactcccgtcccggcagcccgtcaccggaatggtacaaagagtttgtgaccgaggcc
gactctgaagtgctagagcattctgggaaaatttcgcttttgtttgaaatcctgcgaatg
gctgaggctgtggaagataaagtgttggtgttcagtcagtctctcatttctttggacctg
attgaagattttctggagttggcaggcagagccaaagaggaaggcaaaccttcaccgtac
aaaggtgaaggcaagtggttcagaaaccttgactactaccggctggacggttccactaat
gccatgaccagaaagaaatgggcagaagactttaacgacaccaataatactcggggtcga
ttgttcctcatctcaaccagagctggctctcttgggatcaacttggtggctgcaaacagg
gtcataattttcgatgcctcgtggaacccgtcctacgacattcagagtattttcagggtc
tatcgcttcggtcaagttaagacggtgtttgtctacagatttttggctcagggaaccatg
gaggaaaagatctatgaccgacaggtggccaaacagtcgctgtctttccgagtcgtagac
cagcaacagattgaacgtcactttacgatgaacgagctgacggagttgtactcgtttgag
cccgaccagctggacgatccttctgagaagaagagcaagagggccacgcccatgctgccc
aaggatcctatactggccgaattgctccacagcttcaaagatcacattgttggctaccac
gagcacgactccttgctggaccacaaggaggaagaggcattgagtgaggaagaccgtaaa
gcggcctgggccgagtatgaggcagagaagaagggtctgaccatgcgtgtcaatcatccg
tcttactctcagatgggcatgggatcgccgaactacttccccttcaatgtggctgctttg
gcctccatgtccaaccaacagctggaggatttgcttaagcagggcaagcagaaggtcttg
gaagccaccagtgctctaaaggtggtacccagggagccgttggaggacatcattgcacag
ctgtggaaggagaatccgaatctaccggaggctcagattcagtccatggctctggggcga
caggctaactgtgaaatggagcttaaacaccgggaggcagtttaccgtgatgtccttggc
aaacaacaaaccctgatgatgtacgtgcagaaagtgctcaacaaccgtaaggtccaggaa
cagcagatagccatggcgagacagggtatgctgctcaaccaactggccatgcagaacggc
ctgacggcacccatgagtcagatggagcttctcggtctttatcagcagctcggggcgctc
cacggactcccgagctctcagctgggcaagaatccgggcccgtctacgggtctgtag
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integrated database retrieval system
