Paramisgurnus dabryanus (large-scale loach): 135731211
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Entry
135731211 CDS
T10799
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135731211 (rlim)
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135731211 (rlim)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135731211 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
SPT6_acidic
Prok-RING_4
zf-RING_16
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
135731211
NCBI-ProteinID:
XP_065105241
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All DBs
Position
16:complement(6538941..6544613)
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AA seq
641 aa
AA seq
DB search
MEGQDNADQGGSDQSEMQRRRQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
ADELLNRLRQIKDGPEPPSSDTTEERQEGPPETESEGTEENSNEETLLDWLNTVRQTGNT
TRSGNRGNQSWRAVSQTNPNSGDFRFSLEINVNRNLAEQQTQTERSEEGQERPEGQETPD
GPTSEPEVPMETAEVVEDPVVEEVAVIVEPEVQAPSAPSLSSEAIAQDPPVSTPPTLTPV
EQPRRGQIRARSRSPEQRRTRARTARGRSPLNLERLDGLAPIQHGLPPHNPETLPEPQVE
GSSRTRQLFLPRQSTVGAETQEPGAAPEAPEAPQDRETPAGEAGASGRRPPTIMLDLQVR
RVRPGEYRQRDSIANRTRSRSQTSNNTLLYETERGGFRRTFSRSERAGVRTYVSTIRIPI
RRISDAGLGEATSLALQSMIRQIMNGFGELSYFMDSDYSDSNREDSPPADLVDALGNPDV
STVPASSEADSLVSGAEAPNQGGLEARTEEREAEGGVPGGAATPRENRARPRAPISLDET
TSLPFLRLAHFFLLNEEDDDQPRGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKL
RKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSSNRESVV
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcaggataatgcagatcagggtggcagtgatcaatctgaaatgcagaggagg
agacagctggaccgtcttgacagagaggaggctttttaccagtttgtcaacaatctaagt
gaagaggactacaggctcatgagagacaacaatctgctcggcacccccggtgaaattact
gcagatgaactgttgaaccgccttcgccaaatcaaagacggccctgagccgcccagcagt
gacacgactgaggaaagacaggaagggcctcctgagacggagtcagagggcacagaggaa
aactccaatgaggagacccttcttgactggctcaacactgttcggcagacgggtaacaca
acaaggagcggtaaccggggtaaccaatcatggcgggctgtaagccaaaccaatcccaac
agtggagatttccgcttcagtttggagatcaacgtcaatcgtaacttagccgagcagcaa
acgcagacagagaggtcggaagagggacaagaaagaccagagggccaagaaacaccagat
ggccccacgtctgagcccgaagttcctatggagacagcagaggtggttgaagacccggtg
gtggaggaggtggctgttatagtagagccagaggtgcaagctcccagcgccccatctcta
agcagcgaagcgattgcccaagatccaccagtttcaactcctccaaccttgactccagta
gaacaaccacgtagaggtcaaataagggctcgcagcagaagcccagagcaacgacggaca
agggctcgcaccgcaagaggtcgatcacctcttaaccttgaaagattagatggactcgca
cctattcagcatggcctacctcctcataatcccgagacccttcctgagccccaggtggag
ggcagctcgagaactcgtcaactgtttttgcccaggcaaagcaccgtgggagctgagact
caagaaccgggagcagcccctgaggcgcctgaagcgccgcaggatagagagacacctgcc
ggagaagcaggagcttcaggtcgacgaccaccgaccataatgctggatttacaggtacgc
agggtgcgacccggagagtatcgccagagggacagcatcgctaaccgcacgaggtctcgc
tcgcagacttccaataatactttattgtacgagacagagcgtgggggtttccgtcggacc
ttttcgcgttctgaacgagccggagtgagaacgtacgtaagcaccatccgcattcccatt
cgtaggatctcggacgccggactgggggaagccacttccctggctctgcagtccatgatt
cggcagatcatgaatggatttggtgaactcagttactttatggactccgactattctgac
tccaaccgtgaagacagcccaccggcggacctcgtcgatgcactaggtaaccccgatgtt
tcaaccgtacctgcttcttctgaagcggattctttagtttctggggccgaagcgcccaac
cagggtggtttagaggcacggacagaggagagggaggcggaaggtggagtgcccggtggt
gccgcaactcctcgggagaaccgggccaggccacgggctcccattagtctagatgagact
acgtctctgccgtttctgcgactcgcgcacttcttcttactcaacgaggaagatgacgac
cagccacgaggcctcaccaaagagcagatcgataacctgtcaatgcgaaactttggggag
agcgatgcgctcaaaacctgcagcgtctgcattacggagtatgccgaaggcaacaagttg
cgaaagctgccctgttctcacgagtaccatgtgcactgtattgatcgctggctttcagag
aactcaacgtgccctatctgtcgcagggcggtccttgtttccagcaaccgagagagtgtt
gtctag
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