KEGG   Paramisgurnus dabryanus (large-scale loach): 135731280
Entry
135731280         CDS       T10799                                 
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pdab04121]
    135731280 (rnf4)
Enzymes [BR:pdab01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     135731280 (rnf4)
Ubiquitin system [BR:pdab04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    135731280 (rnf4)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_4 RING_XB3-XBAT31 zf-rbx1 zf-C3HC4_4 zf_RING_Vps8 Prok-RING_4 zf-RING_10 zf-UDP zf-RING_11 SieB zf-Nse Rad50_zn_hook IBR_1 zf-RING_6 DZR NOG1_N zf-RING_16
Other DBs
NCBI-GeneID: 135731280
NCBI-ProteinID: XP_065105339
LinkDB
Position
16:complement(9568065..9575871)
AA seq 192 aa
MSNTTQRKKRTASTSSSRRNTSKRSQNQTSHTVMETIDVLENERTNILDDMPLQGEDVVD
LTCEGSEPAVVDLTNNDSIVVVEDAVQNRRGQGTESYVLSSDEEEESSLRLSPGLLSSLH
ASSQARSTPGAVSCPVCMDAYSEIIESGRLMVSTKCGHLFCSQCIRDSLSRAHSCPTCRK
KLTHKQYHPIYI
NT seq 579 nt   +upstreamnt  +downstreamnt
atgagcaatactacacaaagaaaaaagcgcactgcttctacttcatcgtccagacgcaat
accagcaagaggagccaaaatcagacatctcatactgtgatggaaaccattgatgtgctt
gaaaacgagaggactaacattttagatgacatgccattacaaggtgaagatgtggtggat
ttaacatgcgaagggtcagaacctgcggttgttgaccttaccaataatgattcgattgtg
gttgtggaagatgctgtgcagaataggcgtggacaaggcacagaaagttatgtactaagc
agtgatgaagaggaagagtctagtttaagacttagtcctggcttgctctcatctctacat
gccagttcccaagcaaggtctacaccaggggcagttagctgccccgtatgcatggacgct
tattcagagattattgaaagcggacggctcatggtctccacaaaatgcggtcatctgttc
tgcagtcagtgtatacgcgactccctcagtagagctcacagctgccccacatgtagaaag
aaactcacgcacaaacaatatcatccgatatatatataa

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