Paramisgurnus dabryanus (large-scale loach): 135731948
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Entry
135731948 CDS
T10799
Name
(RefSeq) exosome complex component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
135731948
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
135731948
NCBI-ProteinID:
XP_065105963
LinkDB
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Position
Unknown
AA seq
901 aa
AA seq
DB search
MAASSSSAATTKPNDHCASAGKTEPESEFCPGFKDVDAFVKHGLGTVVAATKSSAALPQA
GDEFDLYRSFPAFQEFCASQGDRLLHCMSQIMQHHGCRSHMRDRNKLTGLEDRFDLVVDS
NDAILEKVGILLDEASGVNRTQQPVMPVGYQPPKIVVSSWNRKGGNRSTETFHLLHAKNI
QRPQLKFKEKVDNSNTPFVSKIFIKPNALKPLPSYFTDKHVRKERPEDLDVPAALADFIH
QQRTQEHVDDMFSHPYQYELDHLVMPESLNSKPDPQMFKPIAESSCQFIDTLEDLVALNE
KLAKTSEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLQLRSEMYILNETFTDPTIV
KVFHGADSDIEWLQKDFGLYVVNMFDTHHAARSLNLGRNSLDHLLKVFCDVESDKRYQLA
DWRIRPLPNEMLNYAQADTHYLLYVYDRVRADLYDAGNGQPTLIQQVWSKSRDLSLKKFV
KPIFTEDSYMELYRKQKRSFNTQQLAGFRMLYAWRDKLARDEDESTGYILPNHMMMKIAE
ELPKEPQGIIACCNPTPPLVRQQINELHQFMKQAREIPLLKAETVAEKRTPITPKRRPQP
LLFGPHDTSRSSESDVLDLSSIETPTKPGVLFSEEEETVDENLKPLHGLTAPPQISLFVE
DQEGPGTAHLTVAQQKAHSIMESFENPFRMYLPSKDIHISKNAKYDPSSKIYEIRNQWKL
QSIEQQKKDVQAKQEAKEQAKKAREERKKEKQSYQETVQNVHSVRQQVMEAKQTGQKRER
VSSDVCEESPKTNTKVSKTDTEKTETDPSRTPAPKKHKAKALQDPQVSKQDFKPFDYSQT
NMKIFDGKSKESSQFDPNRPAHDSKQKKNPRRQKQGSVGGRSMSYVPKTSERGFRHNWPK
R
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcctcgagtagtgctgccactactaaacccaacgatcattgtgcatcagcc
ggaaaaacagagccagaatcagagttttgtccaggttttaaagatgtcgatgcatttgtc
aagcacggactgggaactgtggtcgctgccactaaatcgagtgcggctcttccacaggcc
ggagatgagtttgatctttaccgcagtttccctgcctttcaagagttttgcgcttcacag
ggtgatcgacttttacactgtatgagccagatcatgcaacaccatggctgtagatctcac
atgagagacaggaataaactaacaggtcttgaggacagatttgacctggttgtggattca
aatgatgccattcttgagaaagtggggattctcctggatgaagcttctggtgtgaatcgc
acccaacagcctgtgatgcctgtgggatatcagccacccaagattgttgtgtctagttgg
aatcgcaagggaggaaatcggagcactgaaacctttcaccttctacatgccaaaaacatt
caacgtccacagctgaagttcaaggagaaagtggataacagcaacactccattcgtctcc
aaaatcttcatcaaacccaatgctttgaaacctttgccctcttattttaccgacaaacac
gttcgtaaggaaagaccagaggatttagatgttcctgctgcgctggcagatttcatccat
cagcagagaacacaagagcatgtggatgatatgttttctcacccctaccagtatgaattg
gatcatctggttatgccagaaagcctcaattcaaaacctgatccacagatgtttaaacca
attgctgagagcagctgtcagtttattgacacgctggaggatctcgttgctttgaatgag
aagttggccaagacgtccgagtttgctgtggatttggagcatcattcctacagaagtttc
ctaggaatcacgtgcctgatgcagatatccacccgcgaggaggatttcatcatagacacg
ctgcaactgcgcagtgaaatgtacatcttaaacgaaacattcaccgacccaaccattgtg
aaggtgtttcatggggctgactcggacatcgagtggcttcagaaggacttcggactctac
gtggtcaacatgtttgacacccatcatgctgctcgtagcctgaacctcggcagaaactcc
ctcgatcatctcctgaaggtcttctgcgacgtggagtcggataaacgctaccagctggcc
gactggagaataaggcctttgccaaatgagatgttgaattatgctcaggcagacactcac
tatcttctgtacgtgtatgatcgagtacgggccgacctttatgatgcaggcaacggacag
cccaccctcattcagcaagtctggtctaaaagcagagacctttcactgaagaaatttgtg
aagccgatctttacggaggactcgtatatggagctgtaccgcaaacagaagaggagtttc
aacacacagcagctagcgggcttcagaatgctgtacgcctggagagataaactggcacga
gatgaagacgagagcacaggatacatcttaccaaaccatatgatgatgaagatcgctgaa
gaacttccaaaagaacctcagggtatcatcgcttgctgtaacccaacaccacctctagtg
cggcaacagatcaatgaacttcatcagtttatgaaacaagctcgagaaattcctcttctg
aaggcagagacagttgcagaaaaaaggaccccaattacgccaaaaagaaggccccagcct
ttattatttggaccccatgacacgtcccgctcatctgaaagtgatgtcctggacctctct
tcaatcgaaaccccgaccaaaccaggagttttgttttcagaggaggaggagacggtggat
gaaaacctgaaaccactgcacggccttacagctccaccacaaatcagtctctttgtggag
gatcaggagggtccgggcaccgctcatctgacagtagcacaacagaaagcacacagcatc
atggagtcctttgagaacccttttcgaatgtatttaccatcaaaggacattcacatatca
aagaatgccaaatatgatccatcatcaaagatttatgagattcgtaaccagtggaagtta
cagagtattgagcagcaaaagaaggacgttcaagcaaagcaggaggctaaagagcaggca
aagaaagctcgagaagagcgaaagaaggaaaagcagagctatcaggagacggtgcaaaac
gtccatagcgtcaggcagcaagtaatggaagcaaagcagaccgggcagaagagagagcga
gtaagcagtgatgtatgtgaagagagtcctaaaacaaacacaaaagtctcaaagacagat
actgagaaaaccgagaccgatccgtcccggacacctgctccaaaaaaacacaaagccaaa
gctctccaagaccctcaagtctccaaacaggactttaaaccttttgactacagtcagacc
aacatgaaaatatttgacggcaaatcaaaggagagttcacagtttgatccaaacagacca
gcgcatgattccaagcagaagaaaaaccccagaagacaaaagcaaggctctgtaggtggc
aggagtatgtcttatgtacccaaaacatcagagagaggttttcgtcataactggcccaag
agataa
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