Paramisgurnus dabryanus (large-scale loach): 135732024
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Entry
135732024 CDS
T10799
Symbol
pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135732024 (pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135732024 (pnpt1)
03016 Transfer RNA biogenesis [BR:
pdab03016
]
135732024 (pnpt1)
Enzymes [BR:
pdab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
135732024 (pnpt1)
Messenger RNA biogenesis [BR:
pdab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
135732024 (pnpt1)
Transfer RNA biogenesis [BR:
pdab03016
]
Prokaryotic type
tRNA degradation factors
135732024 (pnpt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Motif
Other DBs
NCBI-GeneID:
135732024
NCBI-ProteinID:
XP_065106000
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All DBs
Position
20:32702694..32716903
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AA seq
755 aa
AA seq
DB search
MSCVMRSRLGWLRFGYRSFHQKSAAVSLGDRRLEISTGTLARFADGCAVVKLGETSVMVT
AVSKTKPSVSQFMPLVVDYRQKAAAAGRIPTNYLRRELGTTDSEILTSRLIDRSIRPLFP
AGYFYETQVLCNILAADGVNDPDILAINGASASLALSDIPWNGPIGAVRIGLADGEFIVN
PTRSEMNRSVLNLVVAGAASSNVVMLEAAAENVLQQDFCHAVKLGVKHAQQIIQTIQQMS
RELKVTKRTPGKLFTASAEMVEFARQLASDKIYAVFTDFTHDKISRDEAINKIRLDTEEL
IKEKFPQSESFEVMEAFNSVSKDIFRNLVLHEYRRCDGRDLTSLRDISCQVDIFKPLHGS
ALFQRGQTQVLCTVTFDSLESSIKTDLITTALSGVKDKNFMLHYEFPPYATNEIGKMSGM
NRRELGHGALAEKALRPVVPKDFPFTIRVTSEVLESNGSSSMASVCGGSLALMDSGVPIS
SAVAGVAIGLISKPNPDKTSELTDYRLLTDILGIEDYNGDMDFKMAGTSKGITALQADVK
ISGLPLKIVMEAIQQATVAKKEILGIMNKTISKPRSSRKENGPLVENVKVPLSRRARFVG
PGGYNLRKLQAQAGITISQVDEETFSVFAPTPSAMNEAQEFMKEICKDDQEEQLEFGAIY
TANITEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPTALGLEVGQQIQVKYFGRDPTD
GRMRLSRKVLQSPAATVVKSLSEKQSISIGESQDS
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtgtgatgagatcccggttaggatggcttcggttcggttacaggagttttcat
cagaagagtgcggcggtcagtctcggggaccggaggctggagatctccacagggacgttg
gccaggtttgctgatggctgtgctgtggtcaagctgggtgaaacatctgtgatggtcaca
gctgtcagtaagaccaaaccgtctgtctctcagtttatgcctcttgtggtggattacaga
cagaaagcagcggctgcaggtcgaattcccaccaactacctgagacgagagctgggcacc
acagactccgagatcctcaccagtagactcatcgatcgctccatcaggccattgtttcct
gctggatacttctatgagacacaggtgctgtgtaacatattagctgctgatggggtgaat
gatcctgatattctggctattaatggagcgtctgcctctctggctctgtctgatattccc
tggaatgggccaatcggtgcggtgcgtatcggtctcgcagatggagagtttattgtgaac
ccgacgcgctcggagatgaacaggagtgtgttgaatctcgtggtcgctggagccgcgtcc
agtaacgtcgtgatgctggaggcggcagcagagaatgtacttcagcaggatttctgtcac
gctgtgaaattaggagtcaaacatgcgcagcagatcattcagaccattcaacagatgtca
agagaactgaaagtaaccaaacgaacaccaggcaaactcttcactgcttcggccgagatg
gtggaattcgctcgacaattggcatctgataagatctatgctgtatttacagacttcaca
catgacaagatatccagagatgaagccattaataaaattcgtctggatacagaggaactc
atcaaagagaagtttccacaatccgagtcatttgaggtgatggaagcgtttaacagcgtc
tcaaaagatatattcagaaatcttgttcttcatgaatacagacggtgtgacggaagagat
ctgacatcattgcgggacatttcctgtcaagtggatatatttaaaccgttgcacggctct
gctctctttcagaggggacagacacaggtgctgtgcacggtaacgtttgactctctggag
tccagtattaaaacagacttaataaccacagcactcagtggcgtcaaagacaagaatttc
atgctgcattatgaatttcccccatatgcaacaaatgagatcggaaagatgagtggaatg
aatagacgagagcttggtcatggggcgttggcagagaaagcattgagacctgttgttcct
aaagactttcccttcaccatccgtgtcacatctgaggtgcttgagtccaatggatcatcc
tcaatggcgtctgtgtgtggtgggagtttagcgctcatggattcaggtgttcccatctct
tcggctgtggcaggagtcgccattggtctgatatctaaacccaatcctgataaaacatct
gaactaacagattacagattactgactgatatactgggaatagaagattataatggagac
atggattttaaaatggcaggcaccagtaaagggatcacggctctgcaggcggatgtaaaa
atctcaggacttcctttaaagatcgtcatggaggcgatacagcaggccacagtggctaaa
aaagagattttaggtattatgaataagacgatatctaaaccgaggagctccagaaaggag
aacgggccacttgttgagaatgtcaaagtgcccttgtctcgaagagctcgatttgtaggt
ccaggtggttataatctccgcaaactacaagctcaagcaggtataacaataagtcaagtt
gatgaagagacgttctcagtgtttgcacccacacccagtgccatgaatgaagcccaggag
ttcatgaaagaaatctgcaaagatgatcaggaggaacagctggagtttggtgccatatac
acagccaacattacagagatcagggacattggtgtgatggtgaagctgtatcctaacatg
agcgctgtgctcctacacaactcacagctggatcacaaaaggataaagcatcccactgct
cttggattggaggttggacagcagatccaggtgaagtattttggtcgagaccccacagat
ggcaggatgagattatcacgtaaagttcttcagtctccagcagcgactgtagtgaagagt
ctcagtgagaaacagagcatctctataggagaatctcaagactcgtag
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