Paramisgurnus dabryanus (large-scale loach): 135732299
Help
Entry
135732299 CDS
T10799
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04010
MAPK signaling pathway
pdab04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135732299 (cacna1ba)
04020 Calcium signaling pathway
135732299 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdab04040
]
135732299 (cacna1ba)
Ion channels [BR:
pdab04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
135732299 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
135732299
NCBI-ProteinID:
XP_065106312
LinkDB
All DBs
Position
5:20351066..20514841
Genome browser
AA seq
2241 aa
AA seq
DB search
MILATIIANCIVLGLEQHLPALDKTPMSKRLDDTEPYFIGIFCFEAGIKIIALGFAFHKG
SYLRNGWNVMDFVVVLTGILTIVGPDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MVPLLQIGLLLFFAILMFAIIGLDFYMGKFHRACFRNDTGEQASEFPCGLEQPARTCDID
SICREYWIGPNFGITNFDNILFAVLTVFQCITMEGWVDILYNANDASGNTWNWLYFIPLI
IIGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVML
AEEDKNAEEKEDSAWYKRKCNNPVLKRAKKSKNDLISAEECEDHFTDISSVAPQGSPFTR
TSVKSSKNESSSYFRRKEKRFRFFIRRMVKAQSFYWTVLCIVGLNTLCVAIVHYDQPEWL
TYALYLAEFVFLGLFLIEMSLKMYGLGPRTYFHSSFNCFDFGVIVGSIFEVIWAAVKPGA
SFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQL
FGGQFNFDDETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIKSQGGVHTGMFCSVYFI
VLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQEEAISKKLALQKAKEVKEVSPMSAA
TISLTAFIRPNPGALSCSSSNSSSHSPKEQQRSLKMMSVWEQRTTQIRKHMQASSEALYQ
EELHPRLTSELHLRPDIKTHLDRPLVVEPRCDGPVSPGTDWDKPQDLIGEVGTPEERDAP
IIEPPQSHPPRKHHRHRDRSSHENGDTGMCRHHVHHSRSKEHDGTRYKEGKSDRSRSREG
GHRHHHQSSVDEGVGEKEHRHHHSHRHNREGNGVISTGGKCERRSRHKEGSRSGTREGER
CCRGENGGNGGKRRHRPRTSKAQSTLEGEEEQVNGEKEEGKSQSQSSRHMDIGGDSLTVD
PHHPPVGNRWCLEKPEESDNKRNIDQTGGMGTHIPVTITSPPGETLLIPMNSIDSETVPM
TEKNLEDLHQSGPRPILPFSSMFIFNPTNPVRRLCHYIVSLRYFEMCILVVIAMSSIALA
AEDPVQANGAHNNVLKYLDYVFTGVFTFEMIIKMVDLGLLLHPGSYFRDLWNILDFIVVS
GALVAFAFSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIV
YILFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCRGLFLDYDKDDVAAQPREWKKYEFHY
DNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDQGPSPGYRIEMAIFYVVYFVVFPFFFV
NIFVALIIITFQEQGDKALSECSLEKNERACIDFAINAKPLTRYMPQKQQSFQYRMWKFV
VSPPFEYSIMIMIALNTVVLMMKFYRAPEFYEAMLKYLNIVFTALFSMECVLKIIAFGPL
NYLKDAWNVFDFVTVLGSITDILVTEIKDRLLNLSFLRLFRAARLIKLLRQGYTIRILLW
TFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIEMNEDTAINHHNNFRTFLQALMLLFR
SATGEAWHEIMLSCLSERMCDEGSGTHGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIM
DNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYRDMYEMLLHMSPPLGLGKKCPP
RIAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKELATVW
PNLSQKTMDLLVTPHKSNELTVGKVYAALMIFDYYKQNRAKRLQLQQQQQREQAGPGSQN
KVSALLEPILPLTHMQDRTMISVLDSSKPSSTTLNGRTHLDNTIKGSLSWASEKSKDVPK
SKRRPISRGQSEEASNANTAQESVEMRKMENSANTPISANLEVQGRAVSMPKLNAEMQRS
HSRHSPGTLLEPIPDSPMRRSASTFAPQRPQEVTLNDYTVEKPVHERHHHHHHHHRCHHR
REKDKRQRSLDWSPTGHHKASGTAADPVEERVHDRGRSHERKHHSSSADRQRYYSCDRYG
SREHCPSKNAVASCATSPNEAQEENLNKQGSGWAKGSPVLLTSGASTPSRGRRQLPQTPL
TPRPSVAYRTANSSPVPFLGSQTGLPPPSPGRLSRGLSEHNALLHSGSVSSLPTAVSRIN
SEPFLGPPDYTAGLQPEAYAVFQEDPSPQTGRSPRTVGMPIVAIPPPPQQQFRGVPNGYH
FTTGSSRGRARQYYPEADDWC
NT seq
6726 nt
NT seq
+upstream
nt +downstream
nt
atgattcttgccaccatcatagcaaactgcatagttctgggcttagagcagcatttacct
gcattagacaagacccccatgtcaaagcggctggatgacacggaaccctacttcattgga
atattttgtttcgaggctgggatcaagatcatcgccctaggctttgcttttcataaaggc
tcctatcttcgcaatgggtggaatgtaatggattttgttgtcgtgttgacaggaattctc
accatagtgggaccagatttcgatttgcggacgctcagggcagtcagagtcttgcggcca
ctcaaactggtgtcgggaattcccagtctccaagtggttctgaagtccatcatgaaagcc
atggtacctctgcttcagataggtcttctgctcttctttgctatcctcatgtttgccatc
atcgggctagatttctacatggggaagtttcaccgcgcctgcttcagaaatgataccggg
gaacaggcatccgaattcccctgtgggcttgagcaaccagcgcggacctgtgacattgac
agcatatgtcgagaatactggattggcccaaattttggcataactaactttgacaacatc
ctgtttgctgtgctcactgttttccaatgtatcactatggaaggatgggtggatatcctt
tacaatgccaacgatgcctcagggaatacctggaactggctctacttcatccctctcatc
atcataggctctttcttcatgctcaaccttgttctgggggttctgtcaggggagtttgca
aaggagcgagagcgtgtggagaaaaggcaggagttcctgaagctgcgcagacaacaacag
attgaaagagagctgactggctacctggagtggatctgcaaggcagaggaagtaatgctt
gctgaggaggataaaaacgcagaggagaaggaggatagtgcctggtacaagaggaaatgc
aacaacccagtattaaagagagcaaaaaagagcaaaaatgaccttatcagcgcagaggag
tgtgaagaccatttcacagacatctcatcagtcgctccccagggttctccattcacccgt
acaagcgtgaagagcagcaagaatgagagctcgtcatactttcgcagaaaagagaagagg
tttcgcttcttcattcgccgtatggtgaaggcccagagcttttactggaccgtactctgt
atagtgggattgaacacactgtgtgtggctatagtccactatgaccagcccgaatggctt
acatacgctctgtatttggcggagtttgtgtttctcggtctgtttctaatagagatgagt
ctaaagatgtatggcctcgggcccaggacctactttcactcctcatttaactgctttgac
tttggggtgattgtgggaagcattttcgaggtaatctgggcagcagtaaaaccaggagct
tcttttggcatcagcgtgttgcgagcgttacgtttgttaagaatattcaaggttacaaag
tattggaactctttgcgaaatctggtggtatctctgctcaattccatgaagtccatcatc
agtctcctgttcctcctgtttctcttcattgtggtttttgctctgctggggatgcagctc
ttcggtggacagtttaattttgacgacgagacgccgactaccaactttgacacatttcct
gctgctattctgacagtgtttcagatcttgacaggagaggattggaacgctgtgatgtat
catggaattaaatctcagggaggagtgcacacgggaatgttctgctccgtgtactttatt
gtcctcacgctgtttggaaactacaccttactgaatgtctttttagccattgctgttgat
aacctggctaatgcacaagaacttaccaaggatgaggaggaacaagaggaggccatcagt
aagaaactggctctacagaaagccaaggaagtaaaggaggtcagccctatgtcggccgct
accatttccctgacagcttttataaggccaaatcctggtgctctttcatgcagttcctcc
aactccagctctcattcacccaaagaacagcaacgatccctcaagatgatgtccgtgtgg
gagcaacgcaccacccaaatccgtaagcacatgcaggccagcagcgaggcattgtaccag
gaggagctccacccccgtctaacttctgaacttcaccttcgcccagacatcaaaactcac
ttggaccggcctttggtggtggaacctcgttgtgatggtcccgttagccccgggacagac
tgggacaagccccaggatttgataggggaagtcggcacaccagaggaaagagatgcccct
attatcgaacccccacagtcccacccaccacgcaagcaccaccgtcaccgggaccggtcc
tcccatgaaaacggtgacactggcatgtgcagacatcatgttcatcacagtcggagcaaa
gagcacgatgggacccgatataaagagggaaagagtgacaggagccggagcagagaggga
ggccatagacatcatcaccagagctcggttgatgaaggagttggggaaaaggaacatcgt
caccatcactcccacagacataacagggagggcaatggagtgatcagcactggaggcaag
tgtgaaaggaggtccaggcataaggagggctcacgttcaggaacgagggaaggggagagg
tgttgcagaggggagaacggaggtaacggagggaaaaggaggcacaggccccgcaccagt
aaagctcagtccacgctggagggggaagaggaacaagtaaatggagagaaagaggagggc
aagtcgcaaagccaaagctccagacacatggacataggaggagattcactcactgtggac
ccccatcatcccccagtcggcaacaggtggtgccttgagaaaccagaggaatcagacaac
aagcggaacattgatcagactggaggaatgggaacacacattcctgtaaccatcacatct
ccacctggagagacattgctaataccaatgaacagtatagacagtgagaccgtgcccatg
actgaaaagaatctggaggatctacaccaaagtggccctcgtcccatcctccccttcagc
tccatgttcatctttaacccaaccaatccagtaaggcgtctgtgtcactacatagtgagt
ttgcgatactttgagatgtgtatcctggttgtgattgccatgagcagtatagctctggct
gctgaggacccggtccaagccaatggagctcataacaatgtgttgaagtatttggactac
gtcttcactggtgtttttacatttgagatgattattaagatggtggatttaggtttattg
ctgcatcccggttcctactttagagatctgtggaatattttggacttcatcgtggtcagt
ggtgcgctggtggcgttcgcattctcagggaccaagggaaaagacatcaacaccatcaag
tccctgagggtgttgcgagttttgaggcccctgaagaccattaaacgtctgccaaaactg
aaggccgtgttcgattgtgtggtaaactcgctgaagaacgtgttgaatatcctcatcgtt
tacatcctcttcatgttcatctttgccgtcattgctgtgcagctcttcaagggaaagttc
ttctactgcacagatgaatccaaaggcctggagaaagactgcagggggctgttcttggat
tatgataaggacgatgtggcggctcagcccagagagtggaagaaatatgagtttcactat
gacaatgtgctttgggcatttctcactctcttcactgtttccactggagaaggctggccc
acggttttgaagcattctgtggatgccacatttgaagaccaaggtcccagtccaggctac
cggattgagatggccatcttctacgttgtctactttgtggttttccccttcttcttcgtc
aacatttttgtggccttaataatcatcacatttcaggaacagggtgataaagccctgtca
gaatgcagtcttgaaaagaatgagagagcctgcatcgactttgcaataaatgccaagccg
ctgacccgctacatgccacagaagcagcagtcctttcagtaccgcatgtggaagtttgtg
gtctcgccaccttttgagtactccatcatgatcatgattgccctcaacactgtggtcctg
atgatgaagttctacagggcacctgagttttatgaagcaatgctgaagtatctcaacatc
gtcttcactgctctgttttcaatggagtgtgtcctcaagattattgcgttcggacccttg
aattacctgaaagacgcctggaatgtgttcgactttgtgactgtgctgggaagcatcact
gacatcttagtcactgagattaaagaccgtttactgaatctgagctttctgaggctcttc
agagcagccagactcatcaaacttcttcggcagggatataccattcgcatcctgctctgg
actttcgtccagtcttttaaggccctgccttatgtttgccttttaatcgccatgctgttt
ttcatctatgccattattggaatgcaggtgtttgggaacattgagatgaatgaagacacc
gccatcaatcatcacaataactttcgcactttcctccaagcgcttatgctactgttcagg
agtgccaccggtgaggcctggcacgagatcatgctgtcctgtctgagcgagcggatgtgc
gacgaaggctcggggacccacggcaaggagtgtggcagcgattttgcctacttctacttt
gtgtccttcattttcctctgctccttcctgatgttgaacttgtttgtggctgtcatcatg
gacaactttgagtatctgacacgtgactcctccatcctgggtcctcaccacctggatgag
tttatccgagtatgggcggagtatgacccggctgcatgtggccgtatcaagtaccgcgat
atgtatgagatgctgctccacatgtccccaccgttaggtttgggaaagaaatgtcctcca
cgaatcgcctacaagcggctggtgaaaatgaacatgcctattgcagacgacaacactgtg
catttcacgtccaccctgatggctctgatccgcaccgccctggagatcaaactagcgtca
ggcatggtggcacaacgtctgtcagacgctgaactgaagaaggagcttgccacggtctgg
cccaacctgtctcagaagactatggacctgctggtcactccacacaaatccaatgagctc
acagtgggaaaggtgtatgcggctcttatgatctttgactattacaagcagaacagagcc
aaaaggcttcagctgcaacaacagcagcagagagaacaggcaggacctggatctcagaat
aaagtcagtgctctcctagagcccattcttcctttaacccacatgcaagataggaccatg
atcagtgtattggattcctccaaacccagctcgaccacactcaacggacgcacacatctt
gacaacaccattaaaggatctttatcatgggcctcagaaaagtcaaaggacgtccccaaa
tctaaaagacggccaatctcgaggggccaatcggaggaagcctcaaacgcaaacactgcc
caggagtcggtagaaatgaggaagatggagaacagtgccaacacaccaatttctgccaac
cttgaggtccaaggacgtgcagtgtccatgccaaaactcaacgcagagatgcagaggagt
cattcccgtcattctcctggaactttactggaacccattccagattcccctatgagacgc
tcggcatccacttttgcaccccagcgccctcaggaggtcactctaaacgactacactgtg
gagaaacccgttcacgaacgacatcaccaccatcaccatcatcacagatgtcaccatcga
agagaaaaggataagagacagagatccctggactggtcgccgaccggtcaccacaaggct
tcaggcacggcggctgaccccgtcgaggagagggttcacgaccggggtcgttctcacgag
aggaagcaccattcgtcatcagcagacagacagcggtattactcctgtgatcgctatggc
agtcgagaacactgtcctagcaagaatgctgtggcaagctgtgccacctcacccaacgaa
gcccaggaggaaaatcttaacaagcagggcagcgggtgggctaaaggaagcccagtgttg
ttgacctcaggggcaagcactccaagtcgtgggcgcagacagctgccccagacccctctt
actcctcgcccctccgtggcctacaggactgccaactcctcccctgtgccctttctgggc
tctcagaccggcctgcctcccccgagtcccggcaggttaagtcgcgggttgtccgagcac
aacgccctcttacacagcggctccgtctccagcttgccgaccgccgtcagtcgcattaac
tcagaacctttcctgggccctccggattacaccgcaggcctccagcccgaagcttatgct
gtcttccaagaggatccgagtcctcagacaggccggtctcctaggactgtagggatgccg
attgtggcaattcctccacctccacaacagcagttcaggggggtgccaaacggataccac
ttcaccacgggctccagcaggggcagggcacggcagtactacccagaggcggacgactgg
tgctag
DBGET
integrated database retrieval system
