Paramisgurnus dabryanus (large-scale loach): 135732318
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Entry
135732318 CDS
T10799
Symbol
tncb
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04510
Focal adhesion
pdab04512
ECM-receptor interaction
pdab04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135732318 (tncb)
04518 Integrin signaling
135732318 (tncb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135732318 (tncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pdab00536
]
135732318 (tncb)
Glycosaminoglycan binding proteins [BR:
pdab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135732318 (tncb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
EGF_Teneurin
fn3
EGF_Tenascin
EGF_2
Fibrinogen_C
DUF7949
EGF
hEGF
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_Dep-1_2nd
NDNF
Actin
fn3_2
Ig_ENGASE1_C
Big_5
Motif
Other DBs
NCBI-GeneID:
135732318
NCBI-ProteinID:
XP_065106336
LinkDB
All DBs
Position
5:20927075..20994808
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AA seq
1966 aa
AA seq
DB search
MGMQGLPLACVAVAILFHLSSAGLVKRVLRHRRESLLTPTTENLTVPSPDQPVVFNHVYN
INVPSGSLCSVDLDSPGTTEMKPKLQSDQHIEHTMDGDNQIVFTHRINIPKQACGCNNNL
PDLKDLLNRLEMLEAEVSSLREQCTSGAGCCGAQVTGEITTKPYCNGHGNYSTESCSCIC
ETGWKGHNCSEPDCPNFCQDQGRCEDGKCVCFEGYGGEDCGIELCPVDCGENGQCIDGTC
ICEEGFLGEDCSFTNCPNNCLGRGRCVDDECVCDEPWTGFDCSELICPNDCYDRGRCVNG
TCYCDEGFTGEDCGELSCPKNCNHRGRCVNGQCVCNIGYSGDDCSKLTCLNDCSKRGHCF
NGKCICDPGFEGEDCSVLSCPDNCNDRGQCVDGECICNAGYEGDDCSEISCPNNCNHHGR
CVNGQCVCHIGYSGDDCSTLTCLNDCSHRGHCVNGECICGAGWKGEDCSVLPCPAYCNDR
GQCVDGRCICNAGYEGEDCSEISCPNNCHSHGRCVNGKCICKVGFAGEDCSIKTCPNDCH
GHGQCVDGKCICKEGFTGEDCSIKTCPSDCHGHGQCVDGKCICKEGFTGEDCSIKTCPND
CHGRGHCVDGKCICKEGFTGEDCSIKTCPNDCHGRGHCVDGKCICKEGFTGEDCSIKTCP
NDCQERGLCVDGKCICEEGFTGDDCSIKTCPNDCHDRGICVDGKCICEEGFAGEDCSIKT
CPNDCNDRGQCVDGKCVCHIGFTGNDCSELTCPNNCHNRGHCVNGQCVCHSNFTGEDCGT
KTCPNNCLDRGFCEDGKCVCFEGFTGEDCADLTCPGNCSDQGQCLNGMCICDLGFTGEDC
SDIIPPKDLTVTEVDPETVDLTWVNEMVVTEYLITYVPTAPGGLEMEMRVSGEKKNATIR
ELEPGIEYLISVFAILNSKMSVPVSARIATHLPEPEGLKFKSVKETTVEVEWDPLNISFD
GWNLIFRNTKEEDGEILNSLTPPDTTFEQSGLGPGQEYEVKLEVVKNNTRGPQASKNVVT
MIDAPSQVEVRDVTDSTALITWLQPVAHVDGISMSYGPNKDSSDKNTINLSSLDTQYHLS
ELEPDTEYEVSLMARRGEMTSFPINEIFTTDLDAPKNLKAVEETDESITLEWKNSKANVL
SYRIKYGPLSGGEHGELVFPSGPQDITHAKITGLRPGTEYGMGVTAIKEERESWPATTNA
VTVLDAPKDLEVSETTETTLALVWRRPVAKIDFYRLVFVSAEGKRTEVEVPGGLNTHTLV
NLIPGMLYTITLIAERGRMKSAPVILSASTDEEKPQVGNITVTEVSWDSFSVSWEVEGKE
FDSFLVEVSDPDGLSDGQNHTLSGQEFSLTVTDLSPSTFYRITLYGIYKGDLVDPVFAEA
VTVAEPEVEHLLVSDITPHSFKLTWAAPEDVFHAFSIKVVDSNGLGQLRHISVSGDKRTE
VVSGLNEDTVYEIELLGTILGRKFQPVIAVARTGLGTPKGIRFSDVTDTSATVHWTAPRS
RVDNFRVTYVPIQGGSPMTLRTDGGEFQTVLLNLTPGVTYQVTVIAVKGLEESEPGSDRV
TTALDKPRGLTAVNITDTEALLLWQPSIATVDGYVITYSADTVAPVMERVSGNTVEFEMN
NLTPATKYTVKVYAVREEAKSAATTTEFITDVDAPQNLAASNIQTESAMLTWQPPRADIS
GYILSFESADGVVREVVLSPTATFYSMSQLTASTEYTVKLQAIAGPKRSRTIFTVFSTIG
VLYKHPKDCTQTLLNGETTSGLYTIYLRGDESQPLQVYCDMTTDGGGWIVFVRRQSGKVE
FFRNWRNYTAGFGDLNDEFWLGLSNLHKITSTGQYELRVDLRDKDDSAYAQYDKFSVSEP
RSHYKVHVGGYSGTAGDSMTYHHGRPFSTYDHDKDIAVTNCALSYKGAFWYKNCHRVNIM
GRYGDNSHSKGVNWFHWKGHEHSIEFAEMKIRPSNFRNFEGRRKRS
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atggggatgcaaggcctgcccctggcctgtgtagcagtggccattttattccacctctca
agtgccggtctggttaaaagagtacttagacacagaagagaatcactgttgacaccaacc
actgaaaatttgacagtcccaagccctgatcagcctgtcgtcttcaaccacgtgtacaat
atcaatgtcccctctggttccctttgctcagtggacctggattcacccggaacaacagaa
atgaagccaaagttacaatctgaccagcatattgaacacaccatggatggggacaaccag
attgtttttacgcacaggattaacattcccaagcaagcttgtggttgtaataataatctc
cctgacctgaaagatcttctgaacagattggaaatgctagaggcagaggtgtccagtcta
agggagcaatgcaccagtggggcagggtgctgcggtgctcaagttacaggggaaatcact
accaaaccctactgcaatggccacggaaattacagcactgagtcctgcagctgtatatgt
gagaccggttggaaggggcacaattgctctgagcctgattgcccaaacttctgccaggac
caaggtcgatgtgaggatggcaagtgtgtctgctttgagggctacggtggtgaagattgt
ggaattgagctgtgccctgtagattgtggtgagaatggtcagtgcattgatgggacttgc
atctgtgaggagggcttcctgggtgaagactgcagttttaccaactgcccaaataactgc
ctaggcagggggcgttgtgtggatgatgaatgtgtttgtgatgagccctggacagggttt
gactgctctgagctcatctgcccaaatgactgctatgaccgtggacgctgtgtcaacgga
acttgctattgtgatgaaggctttactggggaagactgtggagaactttcctgccccaaa
aactgcaaccaccgtggcagatgtgtgaatggacagtgtgtctgcaacatcggctacagt
ggagatgactgttccaagcttacttgcctcaatgactgtagcaagaggggtcattgcttc
aatgggaagtgtatatgtgaccctgggtttgagggtgaggactgcagtgttctctcctgc
cccgacaactgcaatgacagaggacagtgtgtcgacggtgagtgtatctgtaatgctgga
tatgaaggtgatgattgctcagagatttcctgccccaataactgcaaccaccatggcaga
tgcgtgaatggacagtgtgtctgccacatcggctacagtggagatgactgttccacgctt
acttgcctcaatgactgtagccataggggtcactgtgtcaatggggagtgtatatgtggc
gctgggtggaagggtgaggactgcagtgttctcccctgccccgcctactgcaatgacaga
ggacagtgtgtcgacggtaggtgtatttgtaatgctggatatgaaggtgaggattgctca
gagatttcctgccccaataactgccacagtcatgggagatgtgtcaacggcaagtgcatt
tgcaaagtgggctttgctggagaagactgcagcatcaagacctgtcctaatgactgccat
ggtcatggacaatgtgtggatggcaagtgcatttgcaaagagggctttaccggagaagac
tgcagcatcaagacctgtcccagtgactgccatgggcatggacagtgtgtggatggcaag
tgcatttgcaaggagggctttactggagaagactgtagcatcaagacctgtcccaatgac
tgccatggacgtggacattgtgtggatggcaagtgcatctgcaaggagggctttactgga
gaagactgtagcatcaagacctgtcccaatgactgccatggacgtggacattgtgtggat
ggcaagtgcatctgcaaggagggctttactggagaagactgtagcatcaagacctgtccc
aatgactgccaagaacgtggactgtgtgtggatggcaaatgcatttgtgaagagggattt
actggagatgactgcagcattaagacctgtcccaatgactgtcatgaccgtggaatatgt
gttgacggcaagtgcatttgcgaagagggctttgccggtgaagattgcagcattaagacc
tgtcccaatgattgcaatgatcgtggacagtgtgtggatggcaaatgtgtttgccatatt
ggctttactggaaatgactgcagtgagttgacctgccctaataactgccataatcgaggg
cactgtgtaaatggccaatgtgtgtgtcacagcaacttcacaggagaggactgtggtaca
aagacgtgtcctaacaactgtctggatcgtgggttctgtgaagatggaaagtgcgtgtgc
tttgagggcttcactggcgaggactgtgccgatctgacctgtccaggaaactgcagtgac
caaggccaatgtctaaatggaatgtgcatttgcgacttaggcttcactggcgaggattgt
tctgatatcatcccacccaaagatctgacagtgactgaagtcgacccagaaacagtggac
ctcacatgggtcaatgagatggttgtgacagagtatcttatcacatacgtgcctacggct
cctggtggtttggaaatggaaatgagagtttctggtgaaaagaagaatgcaaccatcaga
gagctagaaccaggcatagagtatctaataagtgtctttgcaattctgaacagcaaaatg
agcgttcctgtcagtgccagaatagccacacatcttcctgaacccgagggcttgaaattc
aaatcagtgaaagagacaacagtggaggttgaatgggaccccttaaatatttcttttgat
ggctggaaccttatcttcagaaacacaaaagaggaagatggcgagattttgaactctctc
accccacctgataccacctttgagcagtctggccttggaccaggtcaggagtacgaggtt
aaactggaggttgtaaagaacaacacccgtggacctcaagccagcaagaatgttgtcaca
atgattgatgctcccagccaggtggaagtgcgcgatgtgacagactcaacagctcttatc
acctggcttcagcctgtagctcacgtggacggtatctccatgtcttatggcccaaacaaa
gattcatcagacaaaaacacaatcaacctttcctccctggatacccagtatcatctgtct
gagctggaacctgacacagagtacgaagtgtctttaatggcccgcaggggagagatgaca
agttttcctatcaatgaaatcttcacaacagacctggatgcccctaagaacctcaaggca
gtggaggagacggatgagagcattactctggagtggaaaaacagcaaagccaacgtcctc
agttaccgcatcaaatacggaccactgtctggcggggagcatggagaactggtcttcccc
agtggccctcaagacatcactcatgctaaaatcaccggtctcaggcccgggactgaatac
ggaatgggagtgaccgcaattaaagaagaacgtgagagttggcctgcaacgaccaatgct
gtgactgttcttgatgctcccaaggatcttgaagtgagtgagaccactgagaccacactg
gcattggtctggaggaggccagtggccaagatcgatttctataggctagtgtttgtgtca
gcggagggcaaaagaactgaggtggaggtaccaggtggcctcaatacccatacccttgtg
aatctgatcccaggcatgctgtacaccatcaccctgattgctgaaagaggaaggatgaag
agcgctccagtcatcttgtctgcatccacagatgaggaaaagcctcaggtgggaaacatc
accgtcactgaagtgtcttgggacagcttcagtgtgtcatgggaggtggaaggaaaagag
tttgatagctttctggttgaagtttctgacccggatggcctgtcagatggccagaaccac
accctgtccggccaggagttcagcctgaccgttactgacctctcacctagtactttctac
aggatcactctgtatgggatatacaagggagatttagtagatcctgtctttgctgaagcc
gtcacagtggctgaacctgaagtggagcatctgttggtctcggacatcaccccacacagt
tttaaactgacctgggcagctccagaagacgtctttcatgcattctctatcaaagtggtt
gattcgaatggattaggccaacttcgccacatcagtgtgtccggagacaaaaggacagaa
gtggtttcaggtcttaatgaagatacggtgtatgaaatcgagctcttggggaccattttg
ggaaggaaattccagcccgttatagcagtagctcgaacaggtctgggtacacccaagggg
atacgcttttctgacgtgaccgatacatcggctactgttcactggactgcgcctcgaagc
cgagtagacaacttccgggtcacttacgtacccattcagggtggcagccccatgacactg
agaacagatggaggagagtttcagaccgtgttgctaaatctgacccctggtgtcacctac
caggtgactgtcattgctgtgaagggcctggaggagagcgagccaggatcagatagggtc
acaacagccctggataaaccacgaggcctcacagcagttaacatcacagacacagaagct
ctgctgttgtggcagccttccatcgctactgtggacggatatgtcatcacttacagcgca
gacacggtggctccagttatggaaagggtatcagggaacactgtggagtttgagatgaac
aatcttacgcctgccaccaaatacaccgtaaaggtttacgcagtcagagaggaagccaag
agcgctgcaaccactacagagttcatcacagatgttgatgctccccagaacctggctgcc
agtaatattcaaactgagagtgcaatgttaacatggcagccaccaagagccgacatcagt
gggtatatcctcagctttgagtctgctgatggcgttgtcagggaggttgttcttagcccc
acagcgacattttacagcatgtcccagcttactgcgtccacagagtacacagtgaaactt
caggccattgctgggccaaagagaagcagaaccatctttacagtcttcagcaccatcgga
gtcctgtacaagcaccccaaagactgcacacagactctgttaaatggagaaacaacctca
ggcttgtacacaatatacctgcgtggagatgagagtcagcccctgcaggtctactgtgat
atgacaactgatggaggcggatggatcgtatttgttagacgacagagtggtaaagtcgag
tttttccgtaactggaggaactacactgcaggcttcggtgacctgaatgatgaattctgg
ctgggtctctctaacctccataagatcacctccactggccaatatgaactacgtgtggac
ctcagagataaggatgactctgcatatgcgcaatatgacaaattttcagtctcagaaccg
cgcagtcactacaaagtccatgttggaggatacagtggcactgcaggtgactcgatgacg
tatcaccatggccgcccattctcaacctatgatcatgacaaagatatagcggtcaccaac
tgcgctctatcttataagggggctttctggtataaaaactgtcatcgagtgaatattatg
ggccgatatggagacaacagtcacagcaagggtgtaaactggttccattggaagggtcat
gagcactccattgagtttgcagaaatgaagatcaggccctccaacttcaggaactttgaa
ggaaggagaaagagatcataa
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