Paramisgurnus dabryanus (large-scale loach): 135732408
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Entry
135732408 CDS
T10799
Symbol
tia1l
Name
(RefSeq) cytotoxic granule-associated RNA binding protein 1, like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pdab
Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135732408 (tia1l)
03041 Spliceosome [BR:
pdab03041
]
135732408 (tia1l)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135732408 (tia1l)
Spliceosome [BR:
pdab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135732408 (tia1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
RRM_ACIN1
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
135732408
NCBI-ProteinID:
XP_065106501
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All DBs
Position
5:23688323..23699254
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AA seq
342 aa
AA seq
DB search
MMMMDEDQPKTLYVGNLSRDVTEALILQVFSQIGPCKSCKMIIDTAGNDPYCFVEFYENR
HAAAALAAMNGRKILGKDMKVNWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAP
FGKISDARVVKDLATGKSKGYGFISFINKWDAEGAIQQMNGQWLGGRQIRTNWATRKPSA
PKPTNEGNSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPE
KGYSFVRFDTHEGAAHAIVSVNGTCIEGHIVKCYWGKETADMRSMQQMQMAQQSKPTYAP
QAYGQWGQSYGNGQQMGQYVPNGWQMPTYGVYGQAWNQQGYK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggacgaggaccagcccaagacattgtatgtcgggaacctctccagggac
gttacggaggccctcatcctgcaagtgttctcccagatcggtccctgcaaaagctgtaaa
atgatcattgatacggctggcaatgacccatactgctttgtggagttctatgagaacaga
cacgctgctgcagctctggctgctatgaatggcaggaagattttaggaaaggacatgaaa
gttaactgggcttcgacaccaagcagtcagaagaaagacacaagcaatcactttcacgtc
tttgttggcgatttgagtccagaaatctcaacggatgatgtcagagcggcctttgctcca
tttggaaagatatctgacgctcgtgtggtgaaggatctggccacaggaaaatctaaagga
tacggctttatctccttcattaataaatgggatgctgagggtgccattcagcaaatgaac
ggccaatggctgggaggcagacagatcagaacaaactgggccacaagaaagccatccgct
cccaaaccaaccaatgaaggcaacagcaaacacctgtcctatgaggaggttctgaaccag
tcgagtcctagtaactgcactgtgtattgtggtgggattgcttctggtctttcagatcag
ctgatgagacagactttctccccattcgggcagataatggagatcagggttttcccagag
aaaggctactcatttgtgaggtttgacactcacgagggtgctgcccatgccatcgtgtct
gtaaatggcacttgcatcgagggtcacattgtgaaatgctactgggggaaagaaacggct
gacatgagatcaatgcaacagatgcagatggcccagcagagtaaacctacatatgcaccc
caggcttacggacagtggggccagtcatacggcaacggtcagcagatgggtcaatatgtg
cccaacgggtggcagatgcccacttatggtgtctacgggcaggcctggaatcagcaggga
tataaataa
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