Paramisgurnus dabryanus (large-scale loach): 135732475
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Entry
135732475 CDS
T10799
Symbol
atrxl
Name
(RefSeq) ATRX chromatin remodeler, like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135732475 (atrxl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135732475 (atrxl)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135732475 (atrxl)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
135732475 (atrxl)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
135732475 (atrxl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
135732475
NCBI-ProteinID:
XP_065106611
LinkDB
All DBs
Position
5:complement(24721544..24739979)
Genome browser
AA seq
1745 aa
AA seq
DB search
MSAEVLRPGPPVAAAGSKLGELIGKLHEYLENATEGKNEPTLPGHWNGTVAKEYLEMKAK
AHDAEEAHGSSMSGSSSRSRRKPAVVTKHSGMNESDVSSESGTEDGVSVHSNDPNTGLLP
IGTVFVVPEPVGTDGRDDFRGPEFRSRRVQKQQKDFADKRRGYETERVNCTACGQQVNPF
QRDAIYRHPMLKVLICKNCFKYYMSDDISKDSEGMDEQCRWCAEGGSLIGCDYCSNAFCK
KCVLRNMGRKELSTIMEEERKWYCYVCSPEPLMELVMACDSVLDDLEQAQKRVSRPESNS
VRGKARGGRVGGGPVPSGGLYQRMQRFVDVTSSLSHSFREVIQSEADEEVKVEEKQKRIG
QLRMFRVVLNDLLSANRALQEALDHELTGAKCPGGESNKPKARARQRKSRSSQIPGVTKE
LVVKLTPVPVSTQAIACTSIPPSPDRPTIESSMMGRELEKCEAEVEVRGVEVEVMTEREE
RENYCDNNDAEEEEEGDDDMTDTKSLSLADENKRSPRVKTTPRRRHMATSPTAEHAGLAE
DDSDSDEVPEVLLQTAAAMTNSEEEGLVENSGAMDDVNQHVRKQRLFGLVKTTPPDRSSR
KRNLKERSSSSSSSSSASSRRASQDQGSVERSSRGRARKVARMIEQAESSSSEAGGQELE
SGRSSDSDDQRIKPLTEGVSLLGSGNFQQSSGDEMDIQPAPSLSVDDDDLENRIAKQILL
AQIKANYSSASELDSNSDEQSASETGEKKSKKGTTETTAAEDCDESDSSGSQAESLHRHR
LLHHGLDLPKTEEQGQKKGEKTKNTERQIQDSDDATESTDESSETALSEELSQSETEETG
LESHTPNNKCQSPTDCPDEPTTPDNDVSVISEECLRSTPQGRRQIRRLLEVDQLAKETQS
ALREEEERRRRLAEREKQRLENEKREQEEADSEVIIVSEKPAHSFTPLVLEEDDVTHKPV
VQVHMHLLRKLKPHQREGVRFMWDCCCESIQSVNSSPGSGCILAHCMGLGKTLQVIAFLH
SVLSCRQLSLKRALVVCPLNTVLNWRSEFDKWQRGMRPHTLRVTELATVKSVAVRVELLN
DWFHNGGVMIMGYEIFRILTQNGKKYSKHKDAFHAMLLNPGPDLVVCDEGHILRNAESRI
SKAMQAIRTRRRIILTGTPLQNNLVEYHCMVNFIKENLLGSLKEFRNRFVNPIQNGQCAD
STPADVRLMKNRSHVLHELMSGFIQRRAYSVLKSCLPPKCEYVLFIRMTPLQCQLYKHYL
QNCTGKGAGAKNLFQDLHILSLIWTHPWCLKLSHLSKNKGKEAEPPSDFTALGASAAQNS
EKSNGSQSKETKIRDADDIEDTDLVIQGSGCTQNPNVTNTPTTEIAGEETGFSAGKVPFA
EWYLPFVKEADAKVLEHSGKLQLLMEILHWAEELEDKVLVFSQSLISLDLIESFLQYANE
TNGKEECPYKGKKLWIKHKDYYRLDGTTSACARKRWAQEFNNVKNTRGRLFLISTRAGSL
GINLVAANRVVVFDACWNPSYDIQSIFRVYRFGQNKPVSVYRFLAQGTMEQKIYERQVAK
QSLSSRVLDQQQIQRHFTQSQLNELYRFQPNLQPSIHTQAPLDEVLMLLLQSCGQLIVSY
HEHDSLLDHREEEELSEEERRAAWDEYRAEKKASVQNANAPSPLQLSRKASQQLKHIQQQ
MLAVRNLMQASRTGTPTSLQVKQGGTPPSAARRHSDFITLQLGEPGAVHAALNTSMRADP
SLSHH
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgaggtcctgagacccgggccgccggtggctgcagcgggcagtaagcttggt
gagctgataggtaaactccacgagtacctggaaaatgctacagagggcaaaaacgaacct
actttaccgggacactggaatggaaccgtggccaaagagtaccttgagatgaaagccaaa
gcccatgatgcagaggaggcccatggctcctcgatgtcaggatcttcaagtcgttcaaga
aggaaaccggctgttgtcacaaaacacagtgggatgaacgagtccgatgtttcatctgag
agtggcacagaagatggggtgtctgttcactccaatgacccaaacaccggcctcctacct
ataggaacggtgtttgtagtgcctgagcctgtgggtaccgatggccgtgatgatttccgt
gggccggaatttcgcagcagacgagttcagaagcagcaaaaagactttgctgataaacgt
agaggatacgagactgagagggtaaactgcactgcgtgtggccagcaggtgaatcctttc
cagcgtgatgccatctataggcacccaatgcttaaagtgctgatctgcaagaattgtttt
aagtattatatgagtgacgacatcagcaaggattcggaggggatggatgagcaatgcagg
tggtgtgcagaaggaggcagtctgattggctgtgattactgcagcaatgccttctgtaag
aaatgtgtgctacgtaacatggggaggaaggaactgtcaaccatcatggaggaggaaagg
aaatggtactgttatgtgtgcagtcccgagccattgatggagctggtgatggcctgcgac
tcagttctcgacgacttggaacaggctcagaaacgagtgtcccgtcctgagtcaaactca
gttcgagggaaagctaggggtggtcgagtaggaggtggcccagtgccctctggaggacta
tatcaacgaatgcagcggtttgtggacgtcacgtcatctttgagccattccttcagggaa
gtcattcaaagcgaagcagacgaggaagtgaaggtggaagagaagcaaaagagaatcggg
cagctgaggatgtttcgtgtcgttctgaatgacctgctatcagccaatagagcattacag
gaagccctggaccatgagttaaccggggccaaatgtcccggtggagaatctaataagcca
aaagcgagggcaagacagagaaagtcgaggtcttcgcagatccctggtgtcactaaagag
ctagtggtcaaactcacacctgtaccagtcagcacacaagccatcgcttgcacttccatc
cctccatcacctgacaggccgacaatagagagtagcatgatgggtagagagctagagaaa
tgtgaggcagaggtggaagtgaggggtgtggaggtagaggtaatgactgagagagaagag
agagagaattattgtgataataatgatgctgaagaggaagaggagggggacgatgacatg
actgacacaaaaagtttatcattagccgacgagaacaaacggtctccacgtgtgaaaacc
acgccacgcagacggcacatggccacgagccccacagctgagcatgctggtctagctgag
gatgactctgattctgatgaggtgcctgaggtgcttcttcagacagctgctgccatgacg
aacagcgaggaagagggtttagttgagaacagcggggccatggatgacgtaaatcaacat
gtccgaaagcagcggctttttgggctggtaaaaaccactcctccagacagaagctctcgc
aagcgaaacctcaaagagaggtcatcgtcatcttcgtcatcctcttccgcatcttcgagg
agggcctctcaagaccaggggtcggtggaaagatcgagcaggggaagagctcgcaaagtt
gccaggatgatagaacaagctgagagttcctcgagtgaagctgggggacaggaactggag
agcggacggagcagtgactcggacgatcagaggatcaaaccgctgacagagggcgtctcg
ttgctcggatctggaaatttccaacagtcttccggtgatgagatggacatccaaccggct
ccttcattgtctgtggatgacgatgatttagaaaatagaattgcgaagcagattctgctg
gctcagatcaaagctaactactcctcagcttccgagctggacagcaactctgatgaacag
tcagcgagtgagaccggtgagaagaagagcaagaaagggacaacagagactacagctgct
gaagactgtgatgagtccgattccagtgggtcacaggctgagtcactgcaccggcaccga
ttgctacatcatggtcttgatttgccaaagacagaggagcaaggacagaagaaaggagaa
aaaacgaaaaatacggaaagacaaattcaagattcagatgatgctactgagagcactgat
gaatcaagtgagactgccctaagtgaggaactcagccaatcagagactgaagaaacaggg
cttgagtcgcatactcctaataacaaatgtcagagcccgacagactgtcctgatgagcca
accactcctgataatgatgtttctgtaatctctgaggaatgtttgaggagtacccctcag
ggaaggagacagatcagacggctcttggaggtggatcaactggccaaggagacccagagc
gctctgagggaagaggaggagcgaagaagaaggctagctgagagagaaaaacaacgactg
gaaaatgagaaaagagaacaagaagaagcagactctgaggttatcatagtatctgagaaa
ccggctcatagctttaccccattggttcttgaggaagatgatgtaacgcacaagcctgtg
gtccaagttcacatgcacttactgagaaaacttaaaccacatcagcgagagggtgtgcgg
tttatgtgggactgctgttgtgagtccatccagagtgtgaattcgtctccaggctcaggc
tgtattctggcccactgcatgggactgggaaagactttacaggtcatcgcgttccttcat
tcagtgttgtcatgtagacagttgtctctgaaacgtgctttggtagtgtgtcctctcaac
acggtgctgaactggaggagcgagttcgacaaatggcagaggggtatgagaccccacaca
ctaagggtaacagagctggccacagttaagtctgtggctgttcgtgttgaactcttgaac
gactggtttcataatggtggggtgatgatcatgggttatgaaatttttcggatccttacg
caaaatggcaagaaatacagcaaacataaagatgcttttcacgcaatgctgctgaaccct
ggccctgacttggttgtatgcgacgaaggtcatatcctaaggaatgccgaatccaggatc
tcgaaagccatgcaagctatccgcacgcgtagaagaatcatattgacgggcaccccgctc
cagaacaaccttgttgaatatcattgtatggtaaacttcattaaagagaacctgctggga
tctctgaaggaattccggaaccgttttgttaacccaatccagaatggccagtgtgcagac
tccacccctgctgatgtcagactcatgaaaaatcggtcacatgtcctacacgagcttatg
tcaggattcatacagagacgggcctattctgttttgaagtcctgtctgccacccaagtgc
gagtatgtgctgtttatcagaatgacacctttgcagtgtcagttatacaaacactatctg
cagaactgcacagggaagggagcaggcgcaaaaaacttgtttcaggaccttcatattctg
agtttgatctggacccatccctggtgtctaaagctttctcatctgagcaagaataagggc
aaagaggcagagcctccttctgactttacagcactaggagcgagtgcagcgcaaaattcc
gaaaagtcgaatggttctcaaagcaaagagacaaagatcagagatgcagatgatattgaa
gataccgatttagtcatccagggcagtggatgcactcaaaacccgaatgtcaccaacaca
cccacaacagaaattgctggtgaggaaactgggtttagtgctggtaaagtgccatttgcc
gaatggtatctgccatttgtaaaagaagctgatgccaaagtgctggagcattcgggcaaa
ttacagttgcttatggagattttacactgggcagaggaactggaagacaaagtgctggtg
tttagtcaatctctaatatccctggatcttattgagagtttcctacaatatgcgaacgag
accaacgggaaagaagagtgcccatacaaaggaaagaaactgtggataaaacataaagat
tattatcgcttggatggcacgacaagcgcctgtgctcgcaagagatgggctcaagagttc
aacaatgttaaaaacacaagagggaggttgtttctgatttccactcgtgctggatctctg
gggatcaatttggttgctgcaaacagagttgtggtgtttgatgcctgctggaatccttca
tatgatatccagagcatcttcagggtctatcgctttgggcagaacaaacctgtatctgtg
taccgatttctggctcaggggacgatggagcagaaaatttacgaacggcaggttgccaaa
cagtctttatcctctcgtgttttggaccagcagcagattcagagacactttacacaaagc
cagctgaatgagttgtaccgcttccagccaaatctacagcccagcatacacacacaagca
cctctggatgaggtgctgatgttgcttctgcagagctgtgggcagctcatagtaagttat
catgagcatgactcattgttagaccaccgagaggaagaggagttgagcgaggaagagcgc
agagcagcctgggatgagtaccgtgcagagaaaaaggcctccgtccagaacgctaatgca
ccgtccccactgcagctcagcagaaaggccagccaacagctaaagcatatacagcagcag
atgttggctgttcgaaacctcatgcaagcatccaggactggtactcctacctcactgcaa
gtcaaacaaggcggtaccccaccctctgctgctcggcgccattctgacttcatcaccttg
caactgggggaacctggggcggttcatgcagcgttaaacacaagcatgagagctgatccc
tctctatcccaccactga
DBGET
integrated database retrieval system
