Paramisgurnus dabryanus (large-scale loach): 135732581
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Entry
135732581 CDS
T10799
Symbol
ccdc88ab
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pdab03037
]
135732581 (ccdc88ab)
Cilium and associated proteins [BR:
pdab03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
135732581 (ccdc88ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
KASH_CCD
GAS
APG6_N
Glyoxalase_4
Motif
Other DBs
NCBI-GeneID:
135732581
NCBI-ProteinID:
XP_065106841
LinkDB
All DBs
Position
20:complement(30063658..30144832)
Genome browser
AA seq
1905 aa
AA seq
DB search
MERMENEVFTSLLEEFLLSPLVCWVRYSSFIHHVSSSDVKTTSQLLSDGSHVSEFMALVD
GVYLNDIMTQINPKGSVQRTYRKVNNDPTLRVQNLSILIQQIKSFYQETLQQLVMMSLPD
VLVLGKTPLSEQGLEEMRKLLLLLLGCAVQCERKEDYIDRIQTLDFDTQAAIAAHIQEVT
HNLENVLDLQSLEESESVSQDKDTLLRHMTLNLKRLVDERDQQAETIISLTLERDSGLIS
SAVHAGPSPGESPSIRRTESVQHLSVELADAKAKIRRLRQELEEKTEQLLDCRQELENME
TESKRLQQENLQLLSDARSLRAYRDELDVLREKAIKVDKLESEVMRYKEKLHDIEFYRAR
VEELKEDNHVLLETKSMLEDQLESSRARSDKLHELEKENLQLKNKIHDMEMERDIDRKRM
EELLEENLTLEVAQKQSMDESLHLGWEIEQLSKTTPDLTEAPQKSLSHEVNELASSQLLR
LEKENQVLLKTVEEMKASNENDTLLRLEKDNQTLTQKLEQLTADIECLRSAETLSADLLK
EKAQLEKTLETLQENSERQVKGLEQENKRLNQTITSLRQRSQVSAEARVKDIEKENRVLH
ESIKETSSTLNKMEFERKQLRKDLEHYKEKGERAEELEMEVHRLEREKESLQKRLATLTI
TCEKVEVLEKENAELEAESRKLKKAADALRNVSFQLEVLEKENAQLDEENLKLRRMAESS
RSTGAKAAQLELENRELENERTQLRKSLELLKASSKKTERLEVSYQGLDTENQRLQKALE
NSGRKIQKLEEELVDVETENHNLQQSLEELKISSKGLEQLAQENKVLEQENNQLERDKKQ
LEKENKRLRQQVEIKDSKLDEDNLRIAHLEKENRAFGKEVATLKETCGRIKDVEKDNKEL
VKQVTIDKKTLVTLREELVNEKLKTQQINNELEKLTHELEKIGLNKEGLLADEACSDDRF
KLLESKLESTLKSSLEIKAEKISALEARLQESSNLNQQLRQELNTVKKNYEALRQRQEEE
CMAQSSPSRGREDIQSISKWEKESQEVTRELLKVKDRHIEVERNNATLQAEKQALRTQLK
HLESQSSNLQAQILALQRQTASLQENNTTLQTQNAKLQVENSTLNSQSASLMSQNAQLQA
QHSSTESERDTAVREKEELRTVYDLLLNDHEKLSALHDRQASEYEDLIGKHGDLKSSHKS
LEVQHRSLENRYNQLLKQKTDLEQLERELKLERENIISENKSHQDTATQYHKLKEDHDTL
NSTYRQLLKDNELLQTDHKTLKSQLNAARLEQTRLEADFSKLKEQYQQLDITSTKLTNQC
ELLSQLKGNLEEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQK
EKLEEKIMDQYKFYDPSPPRRRGNWITLKMKKLIKPKSRERMRSLTQTPSRSESSEGFLT
LPHPDSQDSSSVGSGSNSLEDTLSHRTNRKRVEKSQTQASSNALKKLPFMRNRSKEKDRE
KAVYRRSMSMNDLLQTMALSEGQWSSSTDHLEAPDVAAIGSQRIKDFGSVDYCSAVEDYA
ALAVTDSRRAKYTSDKDNASSEDITVLSSQESSLLQAQGVMNGSAARAQGDGAGETELLN
CLPIPSDSKRRTKSTGSEMVSLQQFLNESTDPAEGGLATQSPRLSGERTKGRGILRSASG
KAPKSNSTQSGQPGRPSLRKAESTRVKGSAPPRSGLSSQSRAASVSERLDASASSGLPRA
SSVISTAEGTVRRTSIHDLLSKDIRQPVLVDPSPSRSKTQSASSEYGSVSQAPGPDTTLP
KSASMPCGSVEEPELSSLQAFLGPSFTVDSIFLDSIFCEPGAKGSARNPAILSLNTSLVS
NISGPPHKAPQSKNSGPSGETPASDPDQCFPSEDGQSLWYEYGCV
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggatggagaatgaagtttttacgtctttgttggaagaatttctgctctctcct
ctggtgtgctgggtgagatactcatcattcattcaccacgtttcttcttcagacgtgaag
acgacgtctcagctgctgtcggatggatctcatgtgtcagagtttatggcactagtggat
ggcgtttatttaaatgacatcatgactcagataaatccaaagggaagtgtccagagaact
tacaggaaagtgaacaacgatcccacactgcgtgttcagaacctgtccattctcattcag
cagatcaaatcattttatcaggagactttacagcagctggtgatgatgtcacttcctgat
gttcttgtgttggggaagacacctcttagtgagcaaggcctggaggagatgaggaagtta
ttactgctgctattgggctgtgccgtacagtgtgagaggaaggaggattacattgacagg
attcagactctggactttgacacacaggcagccatcgcagctcacattcaagaggtgacc
cataacctagagaacgtgttagatctgcagtctttggaagaaagcgagtctgtctcacag
gataaagacactctccttagacacatgaccttaaacctcaaacgccttgtagatgagaga
gatcagcaagctgagaccatcatatctctgactctggagagagactccgggctaatttct
tcagcggtccatgccggaccgtcgcccggcgaatcccccagcattcgacgcaccgagagc
gtgcagcacctgtctgtagagctcgccgacgccaaagccaagatcagacgcctgcgacag
gagctagaagaaaaaactgaacaactgctggactgcagacaagagctggaaaacatggag
accgaatcaaagagactccaacaggaaaaccttcagctgctgtctgacgcacgctctctt
cgcgcatatcgcgacgagctggacgtgctccgagaaaaagccatcaaagtagataaactc
gagagtgaagtgatgcgctacaaagagaaactccatgacattgagttctacagggccaga
gtggaggagctgaaagaggacaatcatgtcttgctggagaccaaaagcatgctggaggat
cagctggagtcatccagagctcgctctgataaacttcatgagctagagaaagaaaatttg
cagctgaagaacaagattcatgacatggaaatggagcgagacatagacagaaagcgcatg
gaggagctgttagaggaaaatctgactctagaggtggctcagaaacagagtatggatgaa
tctctgcatctgggctgggagatcgaacagctctctaaaaccacacctgacctcactgaa
gcaccacagaagtctctaagccatgaggtgaatgaactggcatccagtcaactgctcaga
ctggagaaagaaaatcaggtgcttctgaagacagtggaggagatgaaagcatccaatgag
aatgacacactgctcagattggagaaagacaaccagacacttactcagaagctggagcaa
ctgactgcagacatcgagtgtttgcgcagtgctgagactctgagcgcagacctgctgaaa
gaaaaagctcagctggagaaaaccctggaaacactccaggagaattcagaaagacaggtt
aagggactcgaacaggagaataaacgtcttaaccagaccattacctctctcagacagcgt
tcccaggttagcgctgaagctcgtgtcaaagacatcgagaaagaaaaccgtgtgcttcac
gagtccattaaagaaaccagcagcacgcttaacaagatggagtttgagcggaaacaactg
cgcaaagacctggagcactataaagagaaaggagaaagggcagaggagttagagatggag
gttcatcgactggagcgagagaaggagagcctacagaagcgactcgccacactcaccatc
acttgcgagaaggtggaggtcctagagaaggaaaatgccgagctggaagcggagagcagg
aaactgaagaaagctgcggatgctctgaggaacgtatctttccagttggaggtgctggaa
aaagaaaacgctcagctggatgaagaaaaccttaagctcaggcgcatggccgagtcttca
cgttcaacaggagccaaagctgcacaacttgagctggagaacagagagcttgagaatgag
agaactcaactcagaaagagtctcgagctgttaaaggcttcatctaaaaagacagaacgc
ctggaggtaagttaccaaggcttggatacggaaaaccagcggctccagaaggcattggaa
aacagcggccgcaaaattcagaaactggaggaagaattagtggatgtggagactgaaaat
cataacctgcagcagagcctcgaggagctgaagatctccagtaaaggtctggagcagctg
gcacaggagaacaaagttctggagcaggaaaacaatcagctggagagagacaaaaaacag
ctggagaaggagaacaaacgccttcgacagcaggttgaaatcaaagactctaaattagac
gaagacaatctgcgcatcgctcatctagagaaggagaatcgtgcctttggtaaggaggtc
gccactctcaaagagacgtgcggccgaattaaagacgtggagaaagacaataaagaattg
gtcaagcaagttaccattgacaaaaagacactggtcactttgagagaggagttggtaaac
gagaaactaaaaactcagcagattaataatgagctggagaagctgacccatgagcttgag
aagattggtctcaataaagaaggtcttctagccgatgaggcgtgctctgatgacaggttt
aagctcctggagtcgaaactggagtctacgttgaaatcttctttggaaatcaaagcggag
aagatttctgctttagaggctcgtctgcaggagtcctccaatctcaaccagcagctacgg
caggaactcaatacggtaaagaagaattatgaagcgctgcgtcagcgccaagaggaggag
tgtatggcccagagctcgccctctagaggacgggaggacatacagagcatcagtaaatgg
gagaaggagagtcaggaggtcacacgtgagctgctgaaggtcaaagatcgacatattgag
gtggagagaaataatgccactcttcaagcagaaaaacaggccctgcggacacagttaaaa
catctggagtctcaaagcagtaatctacaggctcagatattagctctccagcgtcagaca
gcatccttacaggagaacaacaccaccctacaaactcaaaacgccaaacttcaggtggaa
aactccactctgaactctcagagtgcctcgctcatgtcccagaatgctcagctgcaggcc
cagcactccagtacagaaagcgagagggacacggccgttcgggagaaagaagaactacgc
acagtctacgatcttctgcttaacgaccatgagaaactatctgccctccacgatcgtcag
gcgtcagagtacgaggatcttatcggcaaacacggagacctgaagagcagccacaagagc
ctggaggtccaacaccgcagccttgagaacaggtataatcagctgttaaagcagaagact
gatctagaacagctggagcgagaacttaaattagagcgagagaacatcatctctgaaaac
aagagtcatcaggacacggccacacaataccacaagctgaaagaggaccacgacacgctg
aattcaacgtatcgtcagctgctgaaggacaacgagcttctgcagacagatcataaaacg
ctgaagagtcagttgaacgcggccagactggagcagacacgtctcgaggcagacttctcc
aaactcaaagaacagtaccagcaactggacatcacctccaccaaactcaccaaccagtgc
gagttattgagtcagttaaaagggaatctggaggaggagaaccggcatctgctggatcag
atccagaccctgatgctgcagaatcgaaccctgctggagcagaccatggagagcaaagac
ctgtttcacgttgagcagagacaatacattgataaattgaatgagctaaggagacagaag
gagaaacttgaggagaagataatggaccagtataaattttatgacccatcccctccacga
aggaggggtaattggatcacgctgaagatgaagaaactcattaagcccaagagtcgtgag
cggatgcgctcgctcacgcagaccccgtcccgctctgagtccagtgaaggtttcctgacg
ctgcctcatcctgacagtcaggacagttcatctgtgggctccgggtccaactcgctggaa
gatacactgagccaccgcaccaacagaaagagagttgagaaaagccagacacaggcttcc
tctaatgcccttaaaaagcttcccttcatgaggaacagatccaaggagaaagaccgagag
aaggctgtctaccgccgctcaatgtcgatgaatgacctgctgcagacgatggcactgtct
gaaggtcaatggtccagcagtaccgatcatctagaagcccctgacgttgcggccatcggt
tctcagcgcattaaggactttggatccgtggactattgcagtgcggttgaagactatgca
gcgcttgctgtcactgacagccgcagagccaaatacacgagtgataaagataatgcatcg
agtgaagacatcacagttttatcctcacaggagtccagtctgctgcaagctcagggtgtg
atgaacggcagtgcggctcgagctcaaggcgacggcgccggggagacagagcttctgaac
tgtctgccgatcccatcggacagcaaacgcaggactaaatccaccggcagtgagatggtt
tccctgcagcagtttctgaacgagagcacagacccagcagagggcggcctcgcaacacaa
tcaccacgtctgtctggagagcgcacgaaggggcggggcatcttgcgctcagccagcggg
aaagctccgaagtcaaattccactcagtccggccaaccgggacgcccgagtctgcgtaag
gccgagagcacgcgtgtcaaaggctcggccccaccccgttccggcctctcatcccagagc
agggccgcctcggtgtccgaaaggctggacgcatccgcgtcctccgggctgccccgcgcc
agcagcgtcatctccacagccgagggcaccgtccgcaggaccagcatccacgatctgctg
tccaaagacattcgtcagccagtcctggtggacccgtcgccctccaggtccaagactcag
agcgcatccagtgagtacggctccgtttcccaagcacccggtcccgacacaacactgccc
aagtccgcaagcatgccctgcggcagcgtagaggagcccgagctgtccagtctgcaagct
tttttaggtccttccttcactgtagattccatctttctggactccatcttttgtgagcca
ggggcaaagggcagcgctagaaatccagccatcttgtccctcaatacgtctctggttagc
aacattagtggccctccccataaagcccctcaaagtaaaaacagtggcccgagtggtgag
acgcccgcctctgaccccgatcagtgtttcccctcagaagatggccagtcgctgtggtat
gagtacggctgtgtgtaa
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