Paramisgurnus dabryanus (large-scale loach): 135732666
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Entry
135732666 CDS
T10799
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135732666 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135732666 (ppil2)
03110 Chaperones and folding catalysts [BR:
pdab03110
]
135732666 (ppil2)
04121 Ubiquitin system [BR:
pdab04121
]
135732666 (ppil2)
Enzymes [BR:
pdab01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
135732666 (ppil2)
Spliceosome [BR:
pdab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
135732666 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
135732666 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
135732666 (ppil2)
Chaperones and folding catalysts [BR:
pdab03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
135732666 (ppil2)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
U-box type E3
135732666 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
U-box
Motif
Other DBs
NCBI-GeneID:
135732666
NCBI-ProteinID:
XP_065106983
LinkDB
All DBs
Position
5:complement(31378034..31412223)
Genome browser
AA seq
524 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTEFYGGKKTVIPQGNFRRLPFDHCSLSLQPFEYPMCTEEGVV
FDLMSIVPWIKKYGTNPITGEKLEAKSLIKLNFSKNNDGKYHCPVLYNVFTNNSHIVANK
VTGNVFSYEAVEQLNIKTKSYKDLLTDEPFKRQDLITLQDPTNLDKFNVSNFFHVKNNLK
VLDPDEEKAKQDPAYHLKSTNLETRETLAELYRDYKGDQLLASTMKEPETKKTDKLNAAH
YSTGRVSASFTSTAMAPATIHEADAIADDAVRYQYVKKKGYVRMHTNKGDLNLELHCDKV
PKAGENFIKLCKKGYYDGTVFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFRPNLSH
TGRGILSMANSGPNTNKSQFFITFRSCTYLDRKHTVFGRVVGGFETLTAMENVESDPKTD
KPKSEIKLLTASVFVDPYEEADAQIAAEREKELKKEEEEKAQTSASTSKAKTEAPPKTFR
SGVGKYVNMAATKHSHPDSEKPSTSEAPAKKPKGRTSFGDFSSW
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagacagcatcaaaaagataaaatgtacattacatgtgcagagtacacggag
ttttacggaggaaagaaaacagtaatacctcaaggcaatttcaggcgactgccctttgat
cattgcagtctatctcttcagccctttgagtatcctatgtgtacagaagagggagttgtg
tttgatttaatgagcatagtgccctggattaagaagtatggcaccaaccccattactgga
gagaaacttgaagctaagtccctcatcaagcttaacttcagcaagaacaatgatgggaag
taccactgtcctgtgctgtacaacgtcttcacaaacaactcgcacattgtggccaacaaa
gtcacaggcaatgtgttctcatacgaggccgttgaacagcttaacatcaagacaaagagt
tacaaagatctgctaactgatgaacccttcaaacggcaggatctcatcacgctgcaggat
ccgacaaatctggataaattcaatgtctccaactttttccatgttaaaaacaatttgaaa
gtccttgaccctgatgaggagaaagccaaacaggacccagcgtatcatctgaaaagcacc
aatctagagacgagagaaacactggcagagctttacagggattataaaggagatcagctg
ttggcttccaccatgaaagagccagaaaccaagaaaaccgacaaactcaatgctgctcac
tattccacaggacgagtttctgcctctttcacatccacagctatggctccagccaccatc
catgaagcagatgctattgccgatgacgccgttcgataccagtacgttaagaagaaaggc
tacgttcgcatgcacaccaacaaaggagatttgaatctggagttacattgcgataaggtc
cctaaggctggagaaaacttcattaaactgtgcaagaaaggatattacgacggcaccgtc
ttccaccggtctattcgaaatttcatgattcaaggaggagaccccacaggcacgggtaca
ggcggtgaatctttttgggggaagccgtttaaggatgagttcagacccaatctgtcccac
acgggtcgggggattctgagtatggctaactcgggacccaacacaaataaatcccaattc
ttcataacatttcgctcatgcacatacctggaccggaaacatactgtgtttggaagagtg
gttggtggttttgagaccctgacggcaatggagaatgttgaaagtgatcctaagacagac
aaacccaagtctgagataaagctgctgactgcttcagtattcgtggatccctatgaagaa
gcagacgcacagattgccgccgagagggagaaagaattgaagaaagaggaagaagagaaa
gcacaaacgtccgcttcgaccagcaaagcaaaaacggaagctccgccgaaaaccttcaga
tcaggagtgggcaaatacgtcaacatggcggccacgaaacattcacacccagacagtgaa
aaaccttccaccagtgaagcacctgccaagaaacccaaaggcagaacaagttttggagac
ttcagttcctggtaa
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