Paramisgurnus dabryanus (large-scale loach): 135732669
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Entry
135732669 CDS
T10799
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03030
DNA replication
pdab03410
Base excision repair
pdab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135732669 (pole)
03410 Base excision repair
135732669 (pole)
03420 Nucleotide excision repair
135732669 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdab03032
]
135732669 (pole)
03400 DNA repair and recombination proteins [BR:
pdab03400
]
135732669 (pole)
Enzymes [BR:
pdab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
135732669 (pole)
DNA replication proteins [BR:
pdab03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
135732669 (pole)
DNA repair and recombination proteins [BR:
pdab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
135732669 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
135732669
NCBI-ProteinID:
XP_065106987
LinkDB
All DBs
Position
5:complement(31462417..31497979)
Genome browser
AA seq
2287 aa
AA seq
DB search
MVLQNSGRYKSERGGGDQDNQQDDTSALSAVKRLERSQFTDTMDERFGFERMKEPGEKTG
WLINMHPTEILDDDKRMISAVDYYFIQEDGNRFKIALPYKPYFYVATKKNCEREVISFLS
KKFQGKVAKLEIVPKEDLDLPNHLVGLKRNYIKLSFNTLDDLMKVKREISPAVRKNRERE
KSNDAYTSMLSSALVGGSVVTEDEVVSSKKMTEQLDNIIDMREYDVPYHVRVAIDLKIHV
AHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGFLITNREIVSEDIEDFEFTPKPEYEGPFTIFNEPDEASLIQRWFEHIHETKPTIFV
TYNGDFFDWPFVETRAAQHGLNMYREIGFQKDNQGEYKASQAIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLSYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHVNIVFPNKQEQVFNKLTEDGHVLDSETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTLRHAIEEEENIPLEQVTNFNEVC
DEIKRKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHALNREEQARHEK
KRLGDYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
SAQDSGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIKSTNEKKPKVTISYPGAMLNIM
VKEGFTNHQYQELVDSASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSK
AANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVI
SRKPEGSPVTERAIPLAIFQAEESVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGSA
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAQQTI
TAGDTPDMEDFGAPQRPLQPAILISTKRKRISQGGDSQAESQEQELTQSWREILGSPPSM
GNSREEILVWLRYHKKKWELQLRQRKERRKRRRLVDGESQPTGGGVIRDGPTTGLGSFLR
RTARSILDMPWQIVQIAETNHPGLFKLWAVIGSDLHCMKLNIPRVFYVNQRVPKQEETAT
CKKVNRILPRSSVVYFLYQYTVPEDMYQEHINEINAELSAPDIEGVYETQVPLLFRSLVQ
LGCMCMVNKQVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHKALF
GLFIPSQRKASIFVLDTVRSNQMPNLNTLYSAERTALLEKTTEDLLPPEKHLFEVRAEND
IKAIYRALQRILLNYKEERRGPTLIAVQSNWDRRRLAAGMTVLEEFPVVPVHVMDEISYN
VLDWQRHGARRMIKHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKH
NHLLWLSPTARPDLGGKEADDSRLVMESDERGSMEINSQGCYSTVCVELDIQSLAVNTIL
QSQHVNDMEGGASMGVSFDVIQHASLEEMMSGNQTANAVASYDETALCSNTFRILKSMVV
GWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKIFLQLVAEFKRLG
SSVIYGNFNRLILCTKKRSINDAIAYVEYITNSIHSREIFHSLSITFSRCWEFLLWMDPA
NCGGVKGKLPSSLHYGEDGNETSKKKARAEDDGSEDEDDEEENKGEDEEQDGDGEDVEDL
IESNWNIMQYLPQTASCQKYFLMIISAYIAAVYHSMRQELRRNAPGATPIKRRGGSQVSQ
QPTGDVSALPGLITFSQEYVSSELTQNFFTITQKIQKKVSSTRSVTLPSEMFPVLPGSHL
LLNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEDAQFRDPCKSYVLPE
VICHQCNFCRDLDLCKDPAVAQDGSVLPQWFCSNCQAQYETESIEMALVEALQKKLMSYT
LQDLECTKCKGVKEANMTLYCRCAGDFTLTFSTKSFSEQVEVFRNIAAHYNMNFLLETID
WVLGMNT
NT seq
6864 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaacagtggacgatataaatcagaacgaggaggaggagatcaggacaac
cagcaggatgatacatcggcgctgtccgctgtcaagcggctggagcgcagtcagttcacg
gatacaatggacgagcgcttcggctttgaacgaatgaaggagcccggtgagaagaccggc
tggctgattaacatgcacccaactgaaattctggatgatgacaagcgaatgatcagtgct
gttgactattacttcatacaggaggatggaaatcgtttcaagattgccctaccctataag
ccatatttttatgtagcaactaaaaagaactgtgagagagaggtcatctccttcctgtca
aagaagttccaagggaaagtggcaaagctcgaaattgtccctaaggaagatttagatctg
ccaaatcatcttgtgggactgaagagaaactacatcaaactgtccttcaacacactggat
gaccttatgaaagtgaaacgagagatctcacctgctgtccgtaagaacagggaaagagag
aagtccaatgatgcttacaccagcatgttatccagtgctctggttggtgggagtgttgtg
acggaggatgaagttgtttcttcaaagaagatgactgagcagctcgacaacatcatagat
atgcgagaatatgatgtgccttatcatgttcgtgtggcaattgacctcaagatacatgtg
gctcactggtataatgtgcggtacagaggaagtgcttatcctcctgagattgtgcggagg
gatgatcttgtggaaagacctgatcctgttgttttggcctttgatatcgagaccaccaag
cttccactaaagttccctgatgctgaaacggaccagatcatgatgatctcatacatgata
gatggacagggctttcttatcacaaacagagaaattgtctcagaggacattgaagatttt
gagttcaccccgaaacctgagtatgagggtcccttcactatatttaatgaacctgatgag
gcatctctcatccagagatggtttgaacacatccatgagaccaagcccaccatctttgtc
acttacaatggagacttctttgactggcctttcgtggagacccgggcggcccagcacggc
ctgaatatgtaccgagagatcggcttccagaaggacaatcagggggagtataaagccagc
caggccattcatatggactgcctcaggtgggtgaaaagagacagttacctgcctgtagga
agtcataatctgaaggctgcagcgaaagccaagttaagttatgaccccgttgagctggac
ccagaggagatgtgccgcatggctactgaagaaccgcagactctggccacctactcggtg
tctgacgctgtggccacatactacctttacatgaaatatgttcatcccttcatttttgcc
ctctgcaccattatacctatggaacctgatgaggtattgcggaaaggttctgggaccctg
tgtgaagccctgctgatggttcaggcgttccacgtcaacatcgtcttcccaaacaaacag
gagcaggtgtttaacaaactgacagaggacggtcatgttctcgactctgagacgtacgtt
ggcggccacgtagaggctctggaatctggagttttccgcagcgacattccctgccgtttt
aaaatgaatccagctgcatttgatttcttgcttcagagggtggagagaactcttcgtcac
gccattgaggaagaggagaatattcctctagagcaggtcaccaactttaatgaggtgtgt
gatgagataaagaggaagctgatatctctaaaggaagtgcccaacagaattgagtgccct
cttatttaccatctggatgtaggggccatgtaccccaatatcatcctcacaaacaggcta
cagccctctgcaatggtggatgaagcgacgtgtgctgcttgtgattttaataagccaggt
gcaaactgtcagcgcagaatgacatggcagtggagaggcgagatcatgccagccagtcgg
agtgagtttcatcgcattcagcaacagctggagtctgagaaatttccacctctttttcct
aacggtcctccccgtgctttccacgcgctcaatcgagaggaacaggcacgacatgaaaag
aagcgtttgggagactactgcagaaaagcttacaagaaagttcatctgaccagactggag
gaaagggtcactaccatctgtcagagggagaactcattttacgtcgacacggttcgagct
ttcagagaccggcgatatgagttcaaagggcttcacaaggtctggaagaagaagctgtct
tcagctcaggatagcggtgacgcagcagaggtgaagcgctgtaagaacatggagattctc
tatgagtctctgcaactggcacacaagtgcattcttaactccttctacggatacgtcatg
agaaaaggagctcgctggtattcgatggagatggcagggattgtgtgtttcactggagcc
aacattatcactcaggccagagagttgattgagcagatcgggagacctctggagctggac
actgatggtatctggtgcgtccttcccaacacctttcctgagaattttgtcatcaagtct
accaatgagaagaaacctaaagtgaccattagttatccaggagccatgctcaatatcatg
gtcaaggagggatttaccaatcatcaatatcaggagctggtggactcggcatctctaaca
tatgagaccagagctgagaacagcatcttctttgaggtcgatgggccatacctggctatg
atcctacctgcctctaaagaagaaggcaagaagctcaagaagaggtacgcagtgtttaat
gaggatggatcgctggcagaactaaagggttttgaggtgaagagaagaggtgaacttcaa
ctcatcaagatctttcagtcttctgtgtttgaggcttttctgaaaggcacaacgctagaa
gaggtgtatgcgtctgtggctaaagtcgcagactactggcttgatgtactgtacagcaag
gctgctaacatgccagatgccgagttgttcgagcttatttcggaaaaccgctcaatgtcc
cgtaaactggaagattacggtgaacagaaatccacctctatcagtacggccaagcgtctt
gcagagtttctcggagatcagatggttaaagacgccggcctcagttgtcgatatgtcatc
tctcgcaagccagagggctcgcctgttacagagagggcaatccctctggccattttccag
gctgaggaaagtgttaaaaagcattttcttcgcaaatggctgaagatgcccagccttcat
gatctggacatcagatctattctggactggagttactacattgagcgattaggtagtgct
attcagaagattatcactatccctgcagctctacaacaggttaaaaaccctgtacccaga
gttcgccatccagactggcttcataagaaacttctggaaaagaatgacatttacaagcag
aagaagatcagcgaactctttaccagcgaaggaaagcgacaggtggctcagcaaactatt
acagcaggtgatactcctgatatggaggattttggggctcctcagcggcccctgcagccc
gccatactcataagcactaagaggaagaggatttctcagggaggggacagtcaggctgag
tctcaagagcaggagctcactcagtcttggagagaaatacttggatcaccgccatcgatg
ggtaacagtcgggaggaaattcttgtctggcttcgttaccataagaaaaaatgggagctg
cagcttcggcagagaaaggaacgtcggaagcgacgacggttggttgacggagaatctcag
cccaccggaggtggcgtaatccgtgatggaccgacaacggggctcggtagctttttgcga
agaaccgcccgcagtattctagacatgccctggcaaattgttcagattgcagagaccaat
cacccgggcctgtttaagttatgggctgtcattggcagtgatctccattgcatgaaactc
aacatcccacgagtgttttatgtcaaccaaagagttcccaagcaagaagagacagctacc
tgcaaaaaggtaaacaggatacttccgcggtcaagcgtggtgtattttctgtaccagtac
acggttcctgaggacatgtaccaggaacacatcaatgagatcaacgctgaactctctgca
cctgatattgagggtgtctatgagactcaagttccactgcttttccggtctctggtccag
cttggctgcatgtgtatggtcaataaacaggtggtcagagacctggctggcagagaggca
gatacgttcgatctggaacatctagagatgagatctctggcccagttcagctaccttgag
ccaggcagcgtaaggcacatctacttgtaccatcacagtcagggtcataaagctttgttt
ggtctgttcataccctcccaacgcaaagccagcatctttgttcttgacacggttcgtagt
aatcagatgccaaacctgaacacgctgtacagcgcggagcgcaccgcactactggagaag
accacagaagaccttctgcctcctgaaaaacatctgtttgaagtccgcgctgaaaacgac
ataaaagcgatttaccgcgcgctgcaacgcattctgttaaactacaaggaggagcgccgt
gggccgaccctgattgctgttcagtctaattgggatcgccggcgactggctgcgggtatg
actgtcctagaagagtttcctgtggtgccggttcacgttatggatgagataagctacaat
gttctggactggcagcgtcacggggctcgtcgtatgatcaaacactaccttaatctggac
agctgcctctcacaggcttttgatatggccaggtattatcacttacctgtaggaaacttg
cctcaggacgtttctatatttgggtcggatctatttctcgcacgtcatttgagaaaacac
aaccacctgctgtggctgtcacctacggcacggccggacctcggggggaaagaggctgac
gacagcagactggtgatggagagtgatgagagagggtccatggagatcaacagtcagggc
tgctattctacagtatgtgtggagttggatattcagagcttggcggtcaacaccattctg
cagtcccagcatgtgaacgacatggagggcggggccagcatgggcgtcagctttgatgtc
attcaacacgcatcactggaggaaatgatgtcagggaatcagacagcaaatgcagtggcc
agctatgacgagaccgcgctctgctctaacacgttcaggattctgaagagcatggttgtc
ggatgggttcgagagatcacgcagtatcataacgtctacgctgataatcaggtcatgcat
ttttaccgctggctgcgatctccgagttcactactgtacgaccctgcgctgcatcgcacc
cttctcaacatgatgaagaaaatctttttacagcttgtggcagagttcaagcgtctggga
tcgtctgtgatttatggaaacttcaatcgtctcattctctgtaccaagaaacgaagcatt
aatgacgccattgcatacgtggagtacatcactaacagcatacactcgcgggagatcttt
cactctctgtccatcacattctcacgctgttgggaatttctgttgtggatggatcccgct
aattgtggaggagtgaaggggaaactgccttcaagtcttcactatggagaggatggcaat
gaaacgagcaaaaagaaagctagagcagaggatgatggaagcgaggatgaggatgatgaa
gaagaaaacaagggagaagatgaggaacaggatggtgatggagaagatgtcgaagacctg
attgaaagtaactggaacatcatgcagtaccttcctcagacagcgtcttgtcagaaatac
ttcctcatgatcatctcggcctatattgctgctgtctatcatagcatgaggcaggagctt
cggaggaacgcccctggtgccacgcccataaagaggcggggtgggtcccaggtgtcccag
cagcccactggggatgtcagcgcacttcctggtttgattacattctcccaggagtatgtg
tcaagcgaactgacacagaacttcttcaccatcacgcaaaagattcagaagaaggtatcg
agcacccgaagtgtcactctcccttctgagatgtttcccgtccttcctggttcccacctg
ctcctcaataaccccgcgctggagttcatcaaatacgtctgccaggtgctttctctggat
gctaacatcgtcaaccaggtgaacaaattgaagcgtgatctgttgcgattggtcgacgtt
ggagaattctcagaggacgcgcagtttcgtgatccctgcaagtcttacgtcctacctgag
gtcatctgccaccagtgtaacttctgccgtgacctcgacctctgcaaagatcctgcggta
gcccaggatggttcggttcttcctcagtggttttgttcgaattgtcaggcccagtatgaa
acggagtctatagaaatggccctggtggaggcgctacagaagaaactcatgagttacacg
ctacaagacctggaatgtaccaaatgcaaaggggtgaaagaagcaaacatgacgctgtac
tgcagatgtgctggagattttactctcacctttagcacaaagagcttctccgagcaggtg
gaggtgttcagaaacatcgccgctcactataacatgaactttctgctggaaactattgac
tgggtacttggtatgaacacatag
DBGET
integrated database retrieval system
