Paramisgurnus dabryanus (large-scale loach): 135732742
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Entry
135732742 CDS
T10799
Symbol
pdlim5a
Name
(RefSeq) PDZ and LIM domain protein 5a isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135732742 (pdlim5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
135732742 (pdlim5a)
Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
135732742 (pdlim5a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
PDZ_2
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
135732742
NCBI-ProteinID:
XP_065107086
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Position
5:complement(34513126..34588963)
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AA seq
549 aa
AA seq
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MSGKYSVALQGPAPWGFRLQGGKDFNMPLSISRLIDGGKAAKAGLSVGDLVLSIDGVSTD
NMNHLEAQNKIKSCTGNLSLNLQKASSLTKPDVAPKDDSPEIIKPVPMTTSIPCSSDITN
STHITSSSYKSAHLFGGAGSPHIVSIPSAASAFASALSGRIPNPPPLPSPTGSPNQLPAV
PRPSVYNTPIDLYSAENACEVAMGQRRGLLESQGESLQLNGLPRKHITETDIEFYHIPTH
GDASRKRIMEDTEDWRPRTGTSQSRSFRILAQMTGTESDFEQPQENETTKTTSEDCEEPS
VHVTSPVKTMIKAPGTPVKNTAGFITPTFGVVSNSTPLGPALDRPMPRPHPEDEASLVQM
AEHVPAGKRTPMCAHCNMVIRGPFLVAMGKSWHPEEFTCAHCSVSLSELGFVEEKGSVYC
QHCYEEFFAPTCARCQYKIMGEVINALKQTWHVYCFLCASCQQPIRNNTFHLEDGEPYCE
RDYYSRFGTGCRGCDFPIEAGDTFLEALGFTWHDTCFVCTVCSVSLEGQMFFSKKGKPLC
KKHAHSFKI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaagtacagtgtggcattacagggcccggcgccctggggcttcagactgcaa
gggggcaaagactttaacatgcccctctccatttcaaggctgatagacggaggtaaagct
gcgaaggcaggactatctgtaggagatttggtgttgtccatcgatggcgtctctactgac
aacatgaatcacctagaagctcaaaacaagatcaaatcctgcactggaaatctcagcctt
aacttacagaaagcatccagccttacaaaaccagatgtggcaccaaaggatgattctccg
gaaatcatcaaacctgttcccatgacaacctccattccatgttcctctgacatcacaaac
tccacccacatcacgtcatcttcctataaaagtgctcatctgtttggaggggcggggtca
ccgcacatagtctccattccttccgctgcatcggcttttgcgtccgctttatcgggtcga
atccctaatccaccgcctctacccagtcccaccggctcacccaatcaactacctgcggtg
ccccgcccttccgtttataacacgcccatcgatctctactccgctgagaacgcctgtgag
gtggccatgggccagaggcggggcctactggagagtcagggtgagagcttacagctgaat
ggacttccccgtaagcacatcacagagacggacatcgagttttatcacatcccaactcac
ggtgatgccagcaggaagcgcatcatggaggacacagaggactggcgccctcgaaccggg
acatcacagtcacgatcatttcgaatcctggcacagatgactggcaccgaatctgatttt
gaacagccacaggagaatgagactacaaaaacaacaagtgaggattgtgaggagcccagc
gttcatgtcacctctcctgttaaaaccatgatcaaagccccaggaacacctgtcaaaaac
acagcaggtttcattactcccacttttggtgttgtgagcaacagcacacctctgggtccc
gccttggaccgtcccatgccacgcccacacccagaagacgaagcctcattggtccagatg
gcagagcacgtcccagctggcaaacgcactcctatgtgtgcacactgtaacatggtcatc
aggggtccgtttctggtggcgatggggaaatcgtggcacccggaggagtttacgtgcgct
cactgcagcgtgtctctgagtgaactgggtttcgttgaggagaaaggctcggtttactgc
cagcactgttacgaagagttcttcgccccgacctgcgcacgctgccaatacaaaatcatg
ggggaagtgattaatgccctgaagcagacctggcatgtgtactgcttcttgtgcgcatct
tgccagcaaccaataaggaacaacacttttcacctggaggatggagaaccttactgcgag
agagattattacagtcggtttgggacaggatgccgtggttgtgacttcccaatagaagca
ggagatacgtttctggaagctcttggattcacctggcatgatacttgctttgtgtgcacg
gtgtgcagtgtcagtctggagggtcaaatgttcttctcgaaaaaaggcaaaccactctgc
aagaaacatgcgcacagttttaaaatataa
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