Paramisgurnus dabryanus (large-scale loach): 135732793
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Entry
135732793 CDS
T10799
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
135732793 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135732793 (rnf43)
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135732793 (rnf43)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135732793 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
135732793
NCBI-ProteinID:
XP_065107185
LinkDB
All DBs
Position
5:complement(32536920..32645571)
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AA seq
829 aa
AA seq
DB search
MRVPVRRLAGLWPWLLMAALQVVLGHTGLELAAAVESERSAPKAMIKVTLLKQEPTSRPI
TLEGVFVGGSAGYAEGKLMQSHPLSLCNNSEDERQESAFITIVKLESPESKVHQCQPLLS
KARLALQRGAQAVIFDITDDAGAAQEFRDLGLLPRPVVLVKSSDAEELMGLVNKNEEAMV
LIDIMMEAPKWPHYDVGILLTVALAVLAIIMIFAMRFFCRSNRTWDSVHQQTMRAIGRLE
TRTYVSPGCSGSQRSRGALGSSSSSGSGPVCAICLEEFMDGQDLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGKQTELTSRQPQRSRMPAPPPDHHSQAFLLPHHYSTPHPYPQHH
IPFSMRHHYPRTPSGPLPQLGHCGTSPPLHPRTLRCFPSRPLGASCVYHLTPDGHHGRVH
RPSGHGCRTAGHHFAAPRRSCPRCPAGTQRNASASRAHHGAHHHAHHGGGTHGRQDDGSC
SGASYHTERSGYLADGPASDTSSGSCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSEY
DPFVYGPSKGGTPEATQRPRSLDSVVNRSGNGPDGNGICSEEQQQQVAVFSHVHFHRHRH
HYYEDGELGQGPGRGSDADQGASAALACGPCNVVKDKDCQMQHLSCNCPKADISLRGLED
KDTSPVSSSGPSVVVTSSSLSSPSPACCHKGSAWPSRRKATGCTLEATAPVVHFHQNLDL
QEDCSLHIHYRQGTGNYCCTSPEVTPALLPVPLILDSTGMGDWPCCGGAHVVWQKRMQPA
RSDPQLPSSGSTSDRPLCRAHHNPGHELPRDICLYCQALHSSQEEESGV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagggttcctgtgcggcgactggccgggctctggccgtggctgctcatggccgcctta
caggtggtgttgggccacactgggttggaactagctgctgccgttgagtcggaaagatct
gcgcccaaagccatgatcaaggtgaccctactgaagcaggaacccaccagcaggcccatc
acgctggaaggagttttcgtcggaggcagtgccggctatgccgaggggaaactgatgcag
tctcacccgttgtctctgtgtaacaacagtgaggatgagcgacaggagtcggccttcatc
accattgtcaaactggagagtccagaaagtaaagtgcaccagtgtcagccactgctcagt
aaagcccggttggctcttcagagaggggctcaggcggtcatcttcgatataacagatgat
gccggtgctgctcaagagtttcgtgatttgggtttgttgccgcggccggtcgtattggtg
aagtcgtcagacgccgaggaactgatgggactcgtcaacaagaacgaggaagccatggtg
ttgatagacatcatgatggaggctcctaaatggcctcactatgatgttggcattctcctg
accgttgctctggctgtgttggccatcatcatgatctttgccatgcgctttttctgcagg
tccaacagaacttgggactccgtgcatcagcagaccatgcgggccatcggcaggctggag
acgcgcacgtacgtctctccgggctgcagcggatcccagcgttcacgtggagctctgggg
tcaagcagcagttctgggtccggtccggtctgtgccatctgtctcgaggagttcatggat
ggccaggatttgaggatcatctcctgtgctcatgagtttcataaggaatgtgtcgacccc
tggctcttacagcaccgaacctgcccgctgtgcatgcataacatcatgggtaaacagact
gagttaacatcccgccagccccaaagaagccgcatgccggctcctccaccggaccatcac
agtcaagctttccttcttcctcatcattattcaaccccacacccttaccctcagcaccac
atccccttctccatgcggcatcattacccccgcacgccatctggacctttaccccaactg
ggtcactgtggtacctctccccctctccatccacgcaccctgcgatgctttcctagcaga
ccgttgggtgccagttgcgtgtaccacctcaccccagatggccatcacggacgagtgcac
agaccaagcgggcacgggtgtcggacagcagggcatcacttcgcggcccccagacgttcg
tgtcctcgttgccccgcaggtacccagcggaacgcttcggcttctcgggcgcatcacggg
gcccaccatcatgctcatcatgggggaggtacacatggtcgccaggacgatggcagctgc
tcgggagcgagttatcacacggagcgcagtggttaccttgcagacggaccggccagcgat
accagctcgggatcgtgccacggctcgtccagcgactcggtactgaattgtacggacgtt
agccttcagggcgtctatggcagctggtctactttccgcagttcgcttagcagtgagtac
gacccatttgtgtacggcccgagcaaaggaggaaccccagaggccacccagaggcctcgg
tccctggactcagtagtgaaccgctcgggaaacggacctgatgggaacgggatttgctcg
gaggagcagcaacagcaggtggctgttttcagtcacgtccactttcacagacatagacac
cactattatgaggatggagagctcggtcaagggcccggccggggctctgacgcagatcag
ggagcctcagccgcactagcgtgtggcccctgtaatgtagttaaagacaaagactgccaa
atgcagcacctatcttgcaactgtcccaaagcggacatcagtttgagggggctcgaggac
aaagacacaagtcctgtgtcctcatcgggcccctctgtggttgtaacgtcttcctcttta
tcttctccgtcaccagcttgttgccacaagggctcggcgtggcccagcagacggaaagca
accggctgtacgttggaagcgactgcgccggttgtacatttccatcaaaacttggacctt
caagaggattgtagccttcacattcactacagacaggggactggaaactattgctgcaca
tctccggaagtgactcccgctctccttccggttcccctgattttggactcaacggggatg
ggcgactggccgtgctgcggcggggctcatgttgtgtggcagaaacgcatgcagccggcc
cgttcagatcctcagcttccaagctcgggctctacatcggacagacctctatgtagggct
catcacaacccaggccatgaacttcctagggacatctgtctgtactgccaagctttacat
agtagtcaggaggaagagtctggcgtatga
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