Paramisgurnus dabryanus (large-scale loach): 135732832
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Entry
135732832 CDS
T10799
Symbol
tnca
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04510
Focal adhesion
pdab04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135732832 (tnca)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135732832 (tnca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pdab00536
]
135732832 (tnca)
Glycosaminoglycan binding proteins [BR:
pdab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135732832 (tnca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
FN3_Tor_3rd
EGF
CBM_4_9
hEGF
NDNF_C
Big_5
Motif
Other DBs
NCBI-GeneID:
135732832
NCBI-ProteinID:
XP_065107267
LinkDB
All DBs
Position
5:complement(33435093..33473883)
Genome browser
AA seq
2360 aa
AA seq
DB search
MSRIMSSGDLMFRCFILATLMTVNNAGIVKKMIRHRREAPMIPGTHSVTLTNPSQPVVFN
HVYNIKVPGSPLCSVDLDTPGGSDLEQRDAPSGSEVTEHTTDEQNQIVFTHRINIPKQAC
GCKDAELDLKDLLNRLEMLEGEVSTLREQCSAETTCCSAQATGSIGVKPYCNGHGNYSTE
TCACICELGWKGPNCTIPDCPGDCNDQGQCVDGRCACFDGFTGVDCSMKICPIDCAENGR
CVNGVCVCTEGFSGEDCSESACLNNCLGRGRCVDGECLCDEPWTGFDCTELICPNDCYDR
GRCINGTCYCDTGFTGEDCGAVTCTSDCSGRGFCIDGRCVCDAGYTGDDCSELTCPNNCN
ERGLCVNGMCICDTGYRGEDCSKFSCPNNCNGRGRCVEGRCECEVGFQGHDCSEFSCPNN
CNNRGRCVNGQCVCDEGFAGEDCSATTCPSNCYGQGRCVDGRCVCYPDFTGEDCSEQSCP
SNCLNRGRCVAGQCVCDEGFTGEDCSQMKCPNDCLGRGECVEGRCVCPDGFEGQDCSVSI
CPGNCNNHGRCVRGKCVCDEGFTGDACGERSCPNNCGDVGLCVDGRCVCDEGYIGEDCSE
VSPPKDLSVSDVSAEKLNLTWKNEMLVMEYLITYIPTSPGGLQMDFRVPGDQTSATVSEL
EPGIEYLINVYAVLNNKKSVPVSARVATHLPKPEGLMFKSVRETSVEVSWDKLDFPFDGW
ELIVRNTKEENGKVVNSLNPSESSFEQTGLGPGQKYEVTLGIIKNNTRGPQINATVHTRI
DSPGQIEVGDVTDSSAVISWSRPIAEVDGFRVSYGPSTDPSARRDVDLPAINTQYSLEDL
KPDTEYRVSLASTRADETSEPIYEGFTTGLDAPRDLQPVAQTDSSIIVEWKNSRSSVDGY
RIKYGPISGGAHGEEMFSRGAGDKTRATITGLKPGIEYGIGVTAVKNELESEPATTNALT
DIDAPRDLEVQSSTETSMNLIWKRPRAKISGYSLTFASPDGHREQIDLPATTTSHTLKRL
TPGVQYAVTLVAERGKRKSSPVTLSASTASFTFYLAESAPELSFAKDSDDNLISFVLLDT
SESNFSGSGDQEANDTLTVSNITSDGFDLTWESNKLIGFDSYTVELKDFSGKRSEEVHLQ
REVTGTKIRGLSASTEYQVRLYGISNNQRSSLLEAVAVTAPNSTSYDALTVKSVPAALAT
DQPAVITSSPFKEDLNTEASGDEREGPIQGLPGDLTVTNVSRNTLKLSWSAPKGMFDSFT
IELNSSSKEMKSKMIEVLGETREVDIDGLSPGMRYDITLYGMTKGEKSQPINVHVKTEDK
TPSIRSLSISDVSWDSFNVSWTIDEGLDFQSFVIEVANSAGGPERQNLTVSGDALSLWMS
GLSPNTSYTIALYGVHQGSVLGPVYMEETTDVSPAAGRLFVSNVTSESFIISWNDTRGDI
ERFILEIIDSSWLREPVEYNISHNTQWYEITDLRPATDYIVYLTGVLKGRRTDSISTVAS
TAAEPDLFGLVVSNVTSDAVSLSWRTREKAFDHFIVEVRESALPTQAIGRIVPAGERSAV
LTGLKGDTQYQIKLYATSGGSNTAAITSLVTTEPKPKLGPIVVSETHPSSFTLSWSVTAG
HFDGFVVRITDREQIYDVKELRLSGTERNITVSGLTDSTLFDVVFYGLFGGRQTPSVSFN
TSTASLPKVENLTVSDITPYGFRVSWVARSTEGFRHFQVKVSDSGHLLEPQEYIVPGNQS
FLDILGLITGIGYEISVTGVSGIGLQSRPITTVAVTEAEPEIEHLFVSDVTPESFRLAWT
AEDDLFDRFVLKVRDSRKLSHPREFTVPGDERTRVLTQLMGGTEYEIELYGVSMEHRSQP
ITAVARTGLGALRDLRFTDVKESSAVVHWTEPRAQPDSYRITYMPIQGGTPMIQTVDGTQ
SRVQLINLSPGETYQVSVIAVKGLEESEPVTDSFTTALDTPRSLTAVNVTDTTALLLWQP
AVATVDGYVITYSADEVSAISQQVSGNTAELQLSSLAPATPYTVTVHAIINQLKSPPATT
EFTTDVDAPRDLVASNIQTDSAVLSWKPPRASVTGYILTSQSSDGEIREARLDPSATSHR
LSDLRASTEHTVKLQAFTDDQRSKQISTVFTTVGTLYKNPTDCSQTLLNGDTSSGPYTVY
ITGDEKQPVRTYCDMKTDEGGWMVFLRRQNGKTDFYRNWRNYSAGFGDINDEFWLGLSNL
HKITSNGQYELRVDLRDGQETVFAHYDRFYVGEPRSRYKVQIGAYSGTAGDSLSYHNNRP
FSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGRYGDDSHSRGINWFHWKGHEHSIPF
AEMKIRPVNFRNLEGRRKRS
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaatcatgtcttcaggagatctgatgttcagatgttttattctggccaccctg
atgactgtaaataacgctgggattgtaaagaagatgatcagacacagaagagaagctcca
atgattcctggcacgcacagcgtaacccttacaaacccgtcccagcctgtggtgtttaac
cacgtttataacattaaagtcccgggtagccctttgtgctcagtggacctggacacgccg
ggtggttcggatcttgaacaacgagacgctccgtccggttcagaggtgacggagcacacg
acagatgagcaaaaccagatcgtattcactcatcgcatcaacatcccaaagcaggcctgt
ggctgtaaagatgcagagctggatctgaaggaccttctgaatcgactggagatgttggag
ggtgaagtgtcgacgcttagagagcaatgcagtgcagaaaccacctgctgcagcgcacag
gccacaggttcaataggagtgaagccgtactgcaacggccacggaaactacagcactgaa
acctgtgcatgcatctgtgagttgggttggaaaggtccaaactgtacgattcccgactgt
cccggagactgtaatgaccagggccagtgtgtagacggaaggtgcgcgtgtttcgatggc
tttacaggtgtggactgcagcatgaagatctgtcccattgactgcgctgagaacggacgg
tgcgttaatggggtttgtgtttgcaccgagggtttctcaggtgaagactgctcagagtcg
gcctgcctgaacaactgtctgggccgcggtcgctgtgtggacggcgagtgcctatgtgac
gagccctggaccggcttcgactgtactgagctcatctgtcctaatgactgttacgaccgt
ggacgttgcatcaacgggacctgttactgtgacaccggcttcaccggagaggactgcggt
gcggtcacctgtaccagcgactgctccggtcggggtttctgcatcgatggccgttgtgtg
tgcgatgccggatacacgggcgatgactgctcagagttgacctgtccaaacaattgcaat
gaaagaggactgtgcgtcaatgggatgtgtatatgtgacacgggttaccgcggtgaggac
tgcagtaagttctcctgcccgaacaactgtaacggcagaggtcgctgcgtcgagggacgc
tgcgaatgcgaagttggttttcagggtcacgactgctccgagttcagctgccccaataac
tgcaacaaccgtggtcgctgtgtcaacggtcagtgcgtgtgtgacgaaggctttgctggc
gaggactgcagcgccacgacctgtccatcaaactgttacggtcagggtcggtgcgtggac
gggaggtgcgtttgctatccagacttcactggagaagactgcagtgaacagagctgccca
agcaactgcctgaaccgtgggcgttgtgtcgcaggtcagtgcgtctgtgatgaaggtttc
acaggagaagactgcagtcagatgaaatgtccgaacgattgtctcggccgtggggagtgt
gtggagggccgctgcgtgtgtccggatgggtttgagggtcaggactgctctgtttccatc
tgccctggaaactgcaataatcacgggcgctgtgtccgtgggaaatgtgtgtgtgatgag
ggattcaccggagatgcctgcggtgaaagaagctgtccgaataactgcggtgatgtcggt
ctgtgtgtggatggtcgctgtgtctgtgacgaaggctacattggagaggattgctctgaa
gtctctcccccgaaggatctgagcgtctccgatgtctctgcggagaaactgaacctcacg
tggaagaatgagatgctggtgatggagtatttgatcacttacatcccgacgtcaccgggt
ggcctgcagatggatttccgtgtgcccggagatcaaacgtcagccaccgtgtctgaactg
gaacctgggattgaatatctgatcaatgtttacgctgtcctcaacaataagaagagcgtt
ccagtcagcgcccgggtggcaacgcatctaccaaagcctgaaggtctgatgtttaaatct
gtcagggaaacatcagtggaagtttcatgggataagttggacttcccgtttgacggatgg
gagctgatagttcgcaacacaaaagaagaaaatgggaaagttgtgaacagtcttaaccct
tcagagagcagttttgagcaaacgggtctgggtccaggacagaagtatgaagtgacgctg
ggcatcataaagaacaacacacgaggaccacagatcaacgctactgtacacaccagaatc
gattctccaggacagattgaggttggagatgtaacagatagttcggctgtgatttcgtgg
tccaggccgatagcagaggtggacggattcagggtgtcgtacgggccgagcacagatcca
tcagcccggcgtgatgtcgacctgccggcaataaacacacaatacagcctagaagatctg
aaacctgacacggagtacagagtttctctcgcttccacgagggctgatgagaccagtgaa
cccatctatgagggcttcaccacaggcctggatgctcctcgtgatcttcagcctgtagct
cagacagacagcagcatcatagtggaatggaaaaatagccgatcatccgtggatggatac
cggattaaatacggccctatctctggaggtgctcacggtgaagagatgttctccagagga
gcaggagacaaaacacgagccacaatcacgggcctgaagcccgggatcgaatacggcatt
ggagtcacagctgtaaagaatgaattagaaagtgaaccagcgaccacaaatgcactgacc
gatatcgacgctccacgggatcttgaggttcaaagctcaactgaaaccagtatgaatctg
atctggaagagacccagagcaaagatctccggttacagcttaacgtttgcatctcctgat
ggccatcgtgaacagatcgacctgcctgcgaccacgacctctcacactctgaaaagattg
accccgggtgttcagtatgccgttaccctcgtggcagaacgtggcaaaagaaaaagctca
ccggtgactctgtctgcatctacagcatctttcactttttatttagccgaatcggccccc
gaactcagttttgccaaagactcggatgacaatctcattagctttgtattactcgacacc
tcggagagcaacttctcgggcagcggtgaccaggaagcgaacgacacgctgaccgtgtct
aacatcacatccgatggattcgatcttacgtgggagtcaaataagctcattggctttgat
agttacactgtagaacttaaagatttctcagggaaacggagcgaggaggttcatctccag
cgggaggtgaccggcactaaaattcgtggcttaagcgcgtccacggagtatcaagtaaga
ctttatggaatatccaataaccaaagatcttcactactagaagctgttgctgtcacagca
ccaaactctacctcttatgatgctttaaccgtcaaaagtgtcccagcagcactggccacc
gatcagccagcagttattacctccagtcctttcaaagaagacttgaacaccgaagcctca
ggtgatgaacgtgagggtccaattcagggactcccaggtgacttaacggtcactaatgta
agcagaaatactttgaagctgtcttggtcggctcctaaaggaatgtttgatagcttcact
attgagctgaactccagttcaaaagagatgaaaagcaaaatgattgaagtgcttggagaa
accagggaggttgatatagatggcctaagccctggcatgagatatgacattactttgtat
ggaatgacgaagggcgagaaatctcaaccgatcaatgttcacgtgaagacagaggacaag
acgcccagcattaggagtctgagtatatcagatgtatcttgggatagcttcaatgtatcc
tggaccattgatgaaggccttgactttcagagttttgtgattgaagttgcaaattcagca
ggtggtccagaaagacagaacctgacagtatctggtgatgctcttagtttgtggatgtct
gggctcagccccaacacatcctataccatagcattatatggagtgcaccagggctctgtt
ctgggcccggtctacatggaagagaccacagatgtttctccagccgctggccgtctgttt
gtgtctaatgttacgtccgagagtttcatcatatcatggaatgacactagaggagatatt
gagaggtttatattggagattatagactccagctggctcagggagccagtggaatataat
atatcacacaatacacagtggtatgaaatcactgatctcagaccagccactgattatata
gtctacctgactggagtattgaagggacggaggacagactccatcagtactgtcgcctcc
acagcggccgagccagatttgtttgggctcgttgtttcaaacgttacgtcagacgctgtg
tctctctcctggcggacgagagagaaggcgtttgatcattttatagtcgaggtgagagag
tctgctttgcccacgcaggcgatagggcgaatcgtaccggcgggcgagcgctcggcggtt
cttacaggcctgaaaggagacacgcagtaccaaattaaactctatgccacctcaggcggc
tccaacaccgctgccatcacatctttagtaaccacagaacctaagcctaaattgggccct
atagtggtgtccgaaactcacccgagtagcttcacgttgtcctggagcgtcacagccggt
cactttgatggctttgttgttcgtatcactgaccgtgagcaaatttatgacgttaaagag
ctcagactgtctggaactgagagaaacataaccgtctctggtcttacggactcgacgctc
tttgacgtagtattttacggtctgtttggtggtcgccaaactccatcagtttccttcaat
accagtacagcatcattgcctaaagtggagaacctgacagtttcggacatcaccccgtac
ggttttcgagtgtcctgggtagcgcggtccaccgagggcttccgtcatttccaggtaaaa
gtgtccgactccggccatctgctggagccacaagaatacatagtgccgggaaaccagagc
tttctggatattttgggcctgattactggcattggctatgagatcagtgtgaccggggtg
tcagggattgggttacagtctcgtccaatcacaacagtggctgttacagaagccgaacca
gagattgagcaccttttcgtgtcagatgttacccccgagagttttcgactggcttggacc
gcagaagacgacctctttgatcgatttgtgctcaaagttagagattcgagaaagctctct
cacccacgagagttcacagtacctggtgatgaaagaaccagagttttaacacagctcatg
gggggaactgagtatgaaattgagctttatggtgtctccatggaacatcgctcccaaccc
attactgccgttgcaagaacaggacttggagctctgcgagaccttcgttttactgatgtg
aaggaatcatcagctgttgttcactggactgaacctcgtgcccaacctgattcctatcga
atcacttacatgccaattcaaggaggcactccaatgattcagacagtagatgggacgcag
tctcgggttcagttgataaatctgagtcctggagagacgtatcaggtgtcagttatcgcg
gtcaaaggtttagaggaaagtgaacctgttacagactcttttacaacagctcttgataca
ccgcgcagtctcactgctgtcaatgttactgacacaacagcgctgttactgtggcaacct
gcagtcgcgactgtggatggatacgtcatcacatacagcgcagacgaagtgtcagcgata
tcacagcaggtctctggaaacacagcagagcttcagttgagttctctcgctcctgcgact
ccatacacagtcactgttcatgccattataaatcaactgaagagtccaccggcaaccaca
gagttcacaacagatgtggatgctcctcgtgatctggtggcaagtaacattcagaccgat
agtgctgtactaagctggaaaccaccgcgggcatccgtcaccggttatatactgacctct
cagtcatctgatggagagatcagggaagcgagactggatccgtcggccacatcacaccgt
ctgtctgatctcagagcttcaaccgaacacacggtcaaacttcaggcctttactgatgac
cagcggagcaaacaaatctccaccgtctttacgaccgttggaacgctttacaagaaccct
acggactgctcacagactcttctgaacggagatacgtcatctggtccatacaccgtttat
ataaccggagatgagaaacaaccggtccgaacctactgtgacatgaagactgatgaagga
ggctggatggtgtttctaaggcgtcaaaacggcaagaccgacttctacagaaactggaga
aactactcggctggattcggtgatataaacgatgagttctggttagggctttcaaacctt
cataaaatcacatcgaacggtcagtatgagctccgtgtggacctgagggatggacaggag
acggtgttcgctcactatgacagattctatgttggagaacctcgaagccgctacaaggtt
cagattggtgcatacagtggtaccgcaggtgactctttgagctatcataacaacagacct
ttctccacctacgacaatgacaatgacatcgctgtgaccaactgtgcactgtcttacaaa
ggagcgttctggtacaaaaactgccatcgtgtcaatctgatgggaagatatggagacgac
agtcacagcagaggcatcaattggttccactggaaaggtcacgaacattcgattcccttc
gctgagatgaagatccgtccagttaatttcagaaacttggaaggcagacggaaaagatca
tag
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integrated database retrieval system
