Paramisgurnus dabryanus (large-scale loach): 135733107
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Entry
135733107 CDS
T10799
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pdab04515
]
135733107
Cell adhesion molecules [BR:
pdab04515
]
Cadherins
Protocadherins
135733107
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
135733107
NCBI-ProteinID:
XP_065107490
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Position
15:complement(1391994..1397988)
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AA seq
975 aa
AA seq
DB search
MEQRLLFVWIAGMTLICLLVVSDVVSEERTVRYKIYEEVRPPTVIGTLASNVTWTPDKTR
TFPGIRFKLMSPSTGSFIRFRESDGRLTVEERIDRERVCKRNPRCVITFDVAFVSAEQFE
LFHVEVEVMDVNDNSPEFPRAECTIEISESAAVGTRIPLDAAEDADVGSNSIQSYQITDN
THFSIDVITRVDGVKYAELVLMKELDRESRAFYALKLVATDGGHPPKSGSTNVTVKVKDA
NDNSPVFDQSHYSVDLPEDAPVESVVLDLNAIDPDEGLNGEVVYELGKQVTTKIRQLFKM
DYKTGQLTLQSPVDYEDETTYEIDVQATDLGHNPVPSMCKITVNVRDVNDNPPEISITPI
TPLTDGVAHVSEATGPDILVALISIKDKDSGANGQVSCTLNGGHGNFRLKRAYEGSYTIV
TMAALDREKLPEYNLTVVAEDFGAPPLRTVTSFIIKLTDVNDNAPVFSAKIYEGFIEENQ
LPGTYITTVVASDQDSGLNGEITYELFDSDTNSVSRFAIMNQAGNVYALQSFNYEVTKRL
DLRVQASDRGWPQLHTNAVLVINIVDQNDNAPSITQPPLINGSAEIQLPRDAPPGYIVTR
IKAKDVDAGLNAELTYKLYDGGDFGFAIDPNTGEIYINRKIAHDAQDIWRVLVTVNDNGH
PSLTSTATIHFTLTESAPSNGNFYDEREEEEPGHWTLVLILALTGSSLLFLLVLSYLLCR
SRRNGQKRSAELQDVPYATDNNAVSMISNHTANVFDAHEFHSTSVINTPEKLHDSVQATA
ESPQTFNNKYRSVAGEIDGYSTLPGYGKEAARPITVWKGNSMMTIAVRDPLISGKDSGKG
DSDVNDSDSDISEGVKKDYTSYKGLWACTSECRILGHSDRCWSPSVSRSGGGINPRHLST
FSRTRPSSQVTMNRNSCETQTFRSAALQSLTEDQQTQYDYIHVCSPQSQRRQEDIPVFTH
TEPITTNSPERFTDD
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaagacttttgttcgtgtggatagctggtatgacactcatttgtcttttggtt
gtgtccgacgttgtgtccgaagaacgaacggtgagatataaaatatatgaggaggtgcgt
ccgccgacggtcataggaacactggccagcaatgtcacctggaccccggacaaaacccgc
acgttcccgggcataaggtttaaactgatgagtccatccaccggatccttcatccgcttt
agagaaagcgacgggaggcttacggtcgaggagcgcatcgaccgggagcgcgtttgcaag
cggaatccgcggtgcgtaatcacgttcgatgtcgcttttgtgtccgccgagcaattcgag
cttttccacgtcgaggtggaagtgatggacgttaacgacaactcaccagagtttccgcgc
gccgagtgcaccatcgagatctccgagagcgcggcggtggggacgcgcatccctttggac
gcagccgaggacgcggacgtgggctcaaactctatccagtcctaccaaatcaccgataac
actcactttagcatagatgtcattacgagggtggatggggttaaatatgcggagcttgtg
ctcatgaaggagcttgaccgagaaagtcgcgcgttttacgcactgaagctcgtggcgacg
gacggaggacatcctccgaaaagcggctctaccaatgttactgtcaaagtcaaagacgcc
aatgacaacagtcctgtgtttgaccagagccattactccgttgatttgccagaggatgcg
cccgtcgaatcagtcgtgttggacttaaatgccatagatccggatgagggtctcaacgga
gaggttgtgtacgaactgggcaagcaagtcacaacaaagataagacaactattcaagatg
gattacaaaaccggacagctgactctgcagagtcctgtcgattacgaagacgagactacg
tacgaaatcgatgtgcaggccaccgatttgggtcacaatccggtcccctcgatgtgtaaa
attactgtaaacgtaagagatgtgaacgacaacccccctgaaataagcatcacccctatc
acacctttaacagatggagttgcgcacgttagtgaagctacaggtccggacattctggtt
gctttgattagcatcaaagacaaggactctggtgcgaatggacaggtgagctgcactctc
aacggcggacacggcaactttagactcaaaagggcctatgaaggcagttacacaatagtc
acaatggctgcgctcgacagagaaaagctcccagaatataatttgaccgtggtggcagag
gacttcggtgcaccgccgttacgcacggtcaccagttttataataaagctaacagacgtc
aatgacaatgccccagtgttcagcgcaaagatatatgagggctttatagaggaaaaccaa
ttacctggcacctacatcacgacagttgtggccagcgatcaagattcgggacttaatggg
gaaataacctatgaactttttgactctgacacaaacagcgtctccaggtttgctattatg
aatcaagcgggtaacgtttacgcccttcagagtttcaattacgaggtcacaaagaggttg
gatttgcgcgtccaggccagcgacagaggatggccgcagcttcataccaatgctgttctc
gttatcaatatagttgatcagaatgacaacgcccccagtataactcagccacccttaatc
aatggctctgccgaaatccagctgcccagagacgcgccgcccgggtatattgtgacccga
ataaaggcaaaagacgtggatgcgggtttaaacgccgagctcacctacaagctttacgat
ggaggcgatttcggctttgcaatcgacccgaatacgggggagatatatataaaccgcaaa
attgcgcacgacgcgcaagacatatggagagtgctggtgaccgtgaatgataacgggcac
ccgtcactaacttcaacagccactattcattttactttaacagagtctgcgccttcaaat
ggcaatttctacgatgaaagagaggaggaagagcccgggcactggacactggttttaatt
ctggccctgacgggttcttctttgctgtttctgcttgttttgtcgtacttgttgtgcaga
agtcgcagaaacggacagaagagaagcgctgagctccaagatgttccttacgcgacggat
aataacgctgtgtccatgatctccaaccacacagccaatgtgtttgacgcgcacgagttt
cactccacgtctgtcataaacactcctgaaaaactccacgacagcgtgcaagcaactgct
gaaagcccacagaccttcaacaacaaatacaggagtgtggcgggggaaatagacggatat
tctactttgcctggttatggtaaagaggcggcacgaccgatcacggtatggaaaggtaac
tccatgatgaccatcgcagtaagagatccactgataagtggcaaggacagtgggaaagga
gacagcgatgtgaacgacagtgattctgacatcagtgaaggagtcaagaaagactacact
tcatataaaggtctgtgggcctgtaccagcgagtgcagaatcctcggccattcggatcga
tgctggagtccatctgtaagcagaagcggtggaggcattaatcccagacatctctcgacc
ttctcaaggacacgaccgtcctcgcaggtcacaatgaacagaaacagctgtgagactcag
acattcaggagcgcagccttgcagagccttacagaggatcaacagactcaatatgattac
attcatgtttgttcaccacagtcacagaggagacaagaagacatcccagtatttacacat
acagagcccatcacaacaaacagtcctgaaagatttacagacgactga
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