Paramisgurnus dabryanus (large-scale loach): 135733339
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Entry
135733339 CDS
T10799
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135733339 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135733339 (hspd1)
03110 Chaperones and folding catalysts [BR:
pdab03110
]
135733339 (hspd1)
03029 Mitochondrial biogenesis [BR:
pdab03029
]
135733339 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdab04147
]
135733339 (hspd1)
Enzymes [BR:
pdab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
135733339 (hspd1)
Messenger RNA biogenesis [BR:
pdab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
135733339 (hspd1)
Chaperones and folding catalysts [BR:
pdab03110
]
Heat shock proteins
HSP60 / Chaperonin
135733339 (hspd1)
Mitochondrial biogenesis [BR:
pdab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
135733339 (hspd1)
Exosome [BR:
pdab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135733339 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
135733339 (hspd1)
Exosomal proteins of breast cancer cells
135733339 (hspd1)
Exosomal proteins of colorectal cancer cells
135733339 (hspd1)
Exosomal proteins of bladder cancer cells
135733339 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF8711
ATP_synt_eps_C
Motif
Other DBs
NCBI-GeneID:
135733339
NCBI-ProteinID:
XP_065107869
LinkDB
All DBs
Position
15:14438445..14444277
Genome browser
AA seq
576 aa
AA seq
DB search
MLRLPTVMKQMRPVCRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDRYKNIGARLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMTAVETVINELKKTSKPVTTPEEIAQVATISANGDT
EVGEIISNAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALELANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLQDMAVATGGTVFGDDAVGLAIEDIQAHDFGKVGEVIVTKDDTMLLKG
RGDPAAVEKRANEIAEQLESTNSDYEKEKLNERLAKLSDGVAVIKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDTIKPLNEDQKIGIDIIRRSLRIPAMTIA
KNAGVEGSLVVEKILQSAPEIGYDAMNGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTEIPKEEKEMPGGGMGGMGGMGGMGGMGGF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtttacccactgtgatgaaacagatgaggccagtgtgcagggcgctggcccca
catttgacccgtgcgtacgcaaaggacgtcaagtttggagccgatgcccgggccctcatg
ctccagggcgttgaccttttggctgatgctgtggcagtcacaatgggaccaaagggtcgc
accgtcatcattgagcagagctggggaagccccaaggtcaccaaagatggtgtcacggtg
gccaaaagtattgatctgaaggataggtataagaacatcggggccaggcttgtacaagac
gtagccaacaacactaatgaggaggctggagacggcaccacaaccgccacagtgctggct
cgtgctattgccaaggagggatttgacaccatcagcaaaggcgccaaccctgttgaaatc
cgtagaggagttatgactgcagtggagacggtcatcaatgaactcaaaaaaacctcaaag
ccagtcacaacaccagaggaaatcgcccaggtggccactatttctgccaatggagacact
gaggttggtgagattatctccaatgccatgaagaaagttggacgtaaaggtgttataact
gtaaaggatggtaaaactttacacgatgagcttgagatcattgagggaatgaagtttgac
cgtggctacatttctccttacttcatcaacaccgctaaaggtcaaaaatgtgagttccag
gatgcttatctgcttctaagcgagaagaagatctccagcgtacagagcatcgtgccagca
ctggaacttgccaaccagcaccgcaagcctctggtcattgtggctgaagatgtggatgga
gaggcactcagtactctggtcctcaacaggttaaaggttggactgcaagttgttgcagtc
aaggctccaggatttggggacaaccggaagaaccagctgcaggatatggcagtggccact
ggtggcacagtgtttggtgatgatgctgtcggtctggccattgaggatatccaggcacat
gactttggcaaggttggcgaggtcatcgtgaccaaggatgacacgatgctcctcaaaggc
cgtggtgatccagcagctgttgagaaacgtgcgaacgagatcgccgaacaactggagagc
acaaacagcgactacgagaaggagaaactcaacgagcggctagcaaaactttctgatgga
gtggctgtgattaaggttggaggaacaagtgatgttgaagtaaatgagaagaaagaccgt
gtcactgatgctctgaacgccacgcgagctgctgtggaggagggaattgtgcctggagga
ggctgcgccctgttgcgctgcatcccagccctggataccatcaagcctctaaatgaggat
cagaaaataggtattgacattattcgcagatctttgcgtattcctgcaatgaccattgct
aagaatgcaggagttgaaggatctctggtggtggagaagattttacagagtgctccagaa
attggatatgatgccatgaatggagaatatgtcaacatggttgaaaaaggaattattgac
cccacaaaggttgtgaggaccgcattacttgatgctgcaggtgttgcgtctctgctgtcc
actgctgaagccgtcgtcaccgagatccccaaggaagagaaggaaatgccaggtggagga
atgggaggcatgggaggtatgggtggtatgggaggcatgggaggcttctaa
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