Paramisgurnus dabryanus (large-scale loach): 135733442
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Entry
135733442 CDS
T10799
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdab03036
]
135733442 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pdab04812
]
135733442 (clasp1a)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
135733442 (clasp1a)
Cytoskeleton proteins [BR:
pdab04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
135733442 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
TOR1L1_N
HEAT_EZ
Cnd1
Sec7-like_HUS
Vac14_Fab1_bd
RTP1_C1
HEAT_DAAF5
MMS19_C
TAN
ParcG
Paxt-1_C
Motif
Other DBs
NCBI-GeneID:
135733442
NCBI-ProteinID:
XP_065108075
LinkDB
All DBs
Position
15:complement(10580954..10653834)
Genome browser
AA seq
1630 aa
AA seq
DB search
MEPNMEYCLTQVLQKDVARRLQMGPELIDYITDAEKCHDLESDQTALDKMVDGIATLWVN
SSNFKLALMGIDLLSALVTRLQDRFRTQVGTVLPSLIDRLGDAKDQVRDQDQILLLKIMD
HAASPQYIWDRMLGGFKHKNNRTREGVCLCLIATLNIYGAQGLTLSKIVPHICNLLGDPT
SQVRDAAMNSLVEIYRHVGERVRIDLSKKGLPQSRLNVIFSRFDEVQRAGNMIPSSGSDK
NFDDEDSVDGGRSSSSSSSKGFSSSRRGGTMGSMRRPSSASGSRAAGKDASAGAVDEEDF
IKAFEDVPAVQIYSSKELEDSMNKIREVLSDDKQDWEHRVVALKKMRSLLLAGATEHEGF
LQHLRLLEGAFKLSAKDLRSQVVREACITLGHLSSILGNKFDHGAESIMPTLLNLVPNSA
KIMATSGMAAIRLILKHTHFPRLIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTHTLER
HVAVLTETIKKGIHDADSEARSVARKCYWGFHSHYNREAELLFQALELTYQKALQSHLKS
SDSVVSLPQSDRSSSSSQESLNRPLSVKTVIGAPVTRSKVIGSRVSSTPGALQRSRSDVD
VNAAASAKSRMSSATPQSPFSSAAALPPGSYASLDGAPGKIDGRVRTRRQSSGNTVNASS
TVTDSRGRSRAKVVSQSQRSRSANPTSAGSRSSSPGKLLGHTYGRIPRATAPTTPSDKYS
RVPKSQGCSRETSPSRLALARLCGKALLPATSPYRTLARSSRIPRPSMSQGCSRDTSRES
SRDTSPARGFTPLASRRHSRSTSALSTAEPVGQSDRFGLIHQARISASVNAMRVLNTGTE
VEAAVADALLLGDSRNKRKPLRRRYESDDDANSDASSACSERSYSSRNGGIPHYLRQTED
VAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHSKVFSMF
LETLVDFITVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPFDQQFN
ILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPGDFVNSSETRLAVSRIITWTTEPKSS
DVRKTLHNWASEEFSGRPSTTALLPGDSHLEDRCKQAAQIVLISLFELNTPEFTMLLGAL
PKTFQDGATKLLHNHLKNSSNTSSVSSPSNTMGRTASRHPTSRTSPLTSPTNCSHGGLSP
SRLWGWSVDGLLKHPPPPPPPLPPSHSSIPAGPSLRAFRCALSSSMLEYDTENMNSDEIF
SSLRGVTEAIQSFSYRSQEDLNEPIRRDGKKDDAVGREGASPGSDARLGLDVMEGGRTAL
DNKTSLLNTPSPRSFAVPRTREFAPYGYGDTIASYDKSALKEAVFDDDVDQFRDCRRQDC
GENKMVLPKTFTPDLVADLLKELSNHNERVEERKGALIELLKIAREDSLAVWDEHFKTIL
LLLLETLGDKDHTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAE
EAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQSKVVERISKESLHQLMPDIIPG
LLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTTNSNS
SSSSDVSSHS
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaatatggagtactgtctcacgcaggtgcttcagaaggatgtggcccgcagg
ttgcaaatgggtccggagctcattgactacatcacagatgctgagaagtgtcatgacctg
gagagtgaccagactgcattggataagatggtggatggaatagcaaccttatgggttaac
tcgagcaactttaagctggctctgatgggaatagacctactgtctgccttagtgacaaga
ttacaggaccgatttcggacccaagttggtacagttttgcccagcttgatagatcgttta
ggcgatgccaaagatcaagtcagagatcaagatcaaatcctgctgctaaagatcatggac
catgcagcttctcctcagtacatatgggacagaatgctggggggtttcaaacacaaaaac
aacaggaccagagagggtgtttgtctctgtcttatagcaactctgaacatatacggtgcc
caaggcttaaccctaagtaaaatagtaccacatatatgtaacctacttggagaccctacg
agtcaggttcgagatgcggctatgaattctctcgtggaaatatacagacatgtcggagag
agggttaggattgatcttagcaaaaaaggactgccgcaatcacggttgaatgtcattttt
agcagatttgatgaagtccaaagagctgggaacatgatcccctcatctggttcagataag
aactttgatgacgaggactcagtggatgggggcaggtcctcctcctcttcatcatctaag
ggcttctccagcagcagaagaggaggcaccatgggctcaatgagacgtcccagttctgcc
tctggatccagagctgcagggaaggatgccagtgcaggagccgtggatgaggaggatttc
atcaaagctttcgaagatgttcctgcagtgcagatatattccagtaaggagttggaggat
tcaatgaataagatccgtgaggttctatcggatgacaagcaagactgggagcacagagtc
gtcgctctgaagaagatgcgatcgctgcttctggctggtgcaaccgaacatgaaggtttc
cttcaacatctccggcttttagaaggtgccttcaagctctccgctaaagatcttcggtcc
caagtggttcgcgaggcctgcatcacgttagggcatctgtcctcaatactgggaaataaa
tttgaccatggggctgaaagcatcatgcccacgctgctcaacttggtgcccaacagcgcc
aaaatcatggccacatccggaatggcagccatccgcctcattctcaaacacacacacttt
ccacgccttatcccgattatcacgagcaactgcacttccaaatccgtcgctgttcgaaga
cgatgttacgagtttttagacctgttactgcaggaatggcagacacacactctggagaga
catgtggcggttctaaccgagaccatcaagaaggggatccatgatgctgactcagaggcc
agatctgtggccagaaagtgttactggggatttcacagtcattacaatcgggaggccgag
cttctgtttcaggcattggagttgacgtatcagaaggccctccagtctcacctaaagagc
tcagacagcgtcgtatctctcccacaatctgaccgctcgtcctcaagttctcaagagagt
ctaaatcgaccactctctgtgaagactgttattggagcccccgtaacaagaagtaaagtc
attggctctagggtgtcctccacacccggtgccctccagcgctcccgcagcgatgtggat
gtgaatgcagccgccagcgccaaatcccgcatgtccagcgcaacgccccaatctcccttc
agctccgctgcagctctgccaccgggctcctacgcctctctggacggtgcgcctggtaaa
atagatggtcgtgtgcgcacaaggcggcagagctcaggtaacacggtcaacgccagcagc
acagtgacggatagccgtggtcgaagcagagcgaaagtggtgtcacagtcccagcgatcc
aggtcagctaatcccactagtgccggcagccgatccagctctccggggaagctattaggg
cacacatatggcagaattcctcgggccactgccccaacaacgccttcagacaagtattcg
agggtcccgaaaagtcagggctgcagccgcgagaccagccccagcagattggcactggcc
aggctgtgtggtaaagctcttcttcctgccacttctccctatcgcacgctagcacggagc
agtcgcatcccccgccccagcatgagtcaggggtgcagccgtgacaccagtcgcgagagc
agccgcgacaccagccccgctcggggctttactcctcttgcctcccgacgccactctcgt
tccaccagcgccttgtccacggctgaacccgtgggccagtcagatcgattcggtctgatc
catcaggctcgtatttctgcgtcagtcaatgccatgagggtcctgaacactgggacagag
gtggaagctgccgtggctgatgctttgctgttaggagactccagaaataagcgcaagcca
ttgagaaggaggtacgagtcagacgacgatgccaacagcgacgcatccagcgcctgctcc
gaacgttcctatagctcccgtaacggaggcatcccgcactacctgcggcagacggaggac
gtggcggaggtgctgaaccattgtgccagctccaattggtctgagaggaaggagggccta
ctgggtttgcagaacctgttaaaaagtcagcgtattctcagccgtgtggagcttaagagg
ctttgtgagatattcaccagaatgtttgctgatcctcacagcaaggtgtttagcatgttc
ttggagactctggtggacttcatcactgtacacagagaggatcttcaagactggcttttt
gtactactcactcagctactgaagaagatgggagctgacctcttgggctcagtccaagct
aaggtccaaaaggctctggacatcacacgggaatctttcccatttgaccaacagtttaac
atcctgatgagatttattgttgatcagacccaaacccctaatcttaaggtaaaggtggct
atcctgaaatacatcgagtccttggcacggcagatggaccccggagacttcgtgaattcg
agtgagacaagattagcggtctcccggattatcacctggaccacagaaccaaagagttct
gacgttagaaagacccttcataactgggcaagtgaggagttctcaggcaggcccagcact
acagccctactgcctggagatagtcacctggaggacaggtgcaagcaggctgcccagatc
gtgctgatctcactctttgagctgaacactcccgagttcaccatgctgctgggtgctctg
cccaaaacattccaggatggagccaccaagctcctgcacaaccatctgaagaactccagc
aacaccagcagcgtcagttctccgagcaatactatgggtcgcactgcatcccgtcacccc
acaagcaggaccagccctcttacgtctccaactaactgctcacacggtgggctgtcaccc
agtcggttatggggttggagtgtcgatgggctcttaaagcacccacctccccctcctcct
cctcttcctccatctcactcctctattcctgctggcccctcacttagggccttccgctgc
gctctctcatcaagtatgctggagtatgacacagaaaacatgaactctgatgagatcttc
agctcgctgcgtggtgtcacagaggccatccaaagcttcagttatcgcagccaagaggac
ctgaatgaaccaatcagacgtgatggcaaaaaggacgatgctgttggaagggaaggtgcg
tctccaggatctgatgctagactaggattggacgtaatggaaggaggtcgaaccgctttg
gataacaaaacgtctttgcttaacacgccgtccccgcggtcttttgccgtgccacggaca
cgcgagttcgccccgtacggctacggagacacaattgcatcctatgacaaaagcgccctt
aaagaggctgtcttcgatgatgatgtggatcagtttcgtgactgccgtcgacaggactgt
ggtgagaacaagatggtgctgcccaagacctttactcctgatctggtggcagacctgctg
aaggagctgtccaatcacaatgagcgagtggaggaaaggaagggagccttgatcgaactg
ctgaagattgcacgtgaggacagcctggctgtttgggacgaacacttcaaaaccatctta
ctgttgctattggaaacacttggggacaaggatcacacaatcagagcgctggctttacga
gttctgaaggagatcctgaggaaccaaccagcacgcttcaaaaactatgcagaactcacc
atcatgaagacgctagaagctcacaaggactctcataaggaggtggtaagagcagctgaa
gaggctgcctctacattggccggttccattcacccagagcaatgcatcaaagtgctatgt
cccattgtacagaccgcagactatcccatcaacctggctgctattaagatgcaaagcaaa
gtcgttgagcgcatttctaaagagtccttgcatcagttaatgccagacatcattcctgga
ctcctacaaggctatgacaacacagaaagcagtgttcgaaaggccagtgtgttttgtctg
gtggccatctattcagtgattggtgaggagctaaagccccacttggcccagctcactggt
agcaagatgaagttgctgaatctgtacattaagagggcccagactacaaacagcaacagc
agcagttcttcagatgtttcctctcacagctag
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