Paramisgurnus dabryanus (large-scale loach): 135734724
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Entry
135734724 CDS
T10799
Symbol
usp39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135734724 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135734724 (usp39)
Spliceosome [BR:
pdab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
135734724 (usp39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
135734724
NCBI-ProteinID:
XP_065109702
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All DBs
Position
1:63584865..63586881
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AA seq
493 aa
AA seq
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MIAGMKREKIIDEDEQDEVKVKVRRVEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHI
NVYACLICGKYFQGRGQKSHAYIHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDITY
VLKPTFTKQHISGLDNQGKLYRAYDGTTYLPGIVGLNNIKANDYANSVLQALSNVPPLRN
YFLEEENYRKIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNF
QITKQGDAVDFLSWFLNALHGALGGTKKKSTIITQAFQGSMRIFSKKLPHPDLPPEEKEA
LLLKEDFQEVMSESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFTILAKFNGNTEKEYKT
YKENFLKKFQLTKLPPYLIFCIKRFTKNNFFIEKNPTIVNFPITNVDLREYLTEEAQATE
KITTYDLVANVVHDGKPTEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIW
KRQDIDEGSHTGA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaggcatgaaacgagaaaagattatcgacgaagacgaacaggacgaggtgaag
gtgaaagttagacgagttgaagataggagaagccgccattgtccatatctagacacaatc
aacagaagtgttttggatttcgactttgagaagctttgttcgatctcactctcacacatt
aatgtctacgcgtgtctaatctgtggcaaatatttccaaggacgcggacagaagtctcac
gcgtacattcacagcgttcagtttacgcaccatgttttcctgaatctccacacgctcaag
ttctactgtctgccagacaattacgagatcatcgactcctctttagaggacataacatat
gttctgaaacccacattcaccaaacagcacatctctggcttggataaccaagggaagctg
tatcgagcctacgatggcacaacgtatttgcctggaattgtgggtctcaataatatcaaa
gccaacgactatgccaatagtgttctgcaggcgctgtcaaatgtgcccccactaaggaac
tatttccttgaagaggagaactaccgtaaaattcggcggccacccggtgacatcatgttc
ctgttggttcaacgctttggggagctaatgcgcaagctttggaacccgcgtaacttcaaa
gctcacgtgtctccgcatgaaatgttgcaggctgtggtgttatgcagtaaaaaaaacttt
cagatcaccaagcaaggggatgccgtggactttctctcctggttcctgaatgcattgcac
ggtgccctcggtgggacgaagaaaaaatcgaccatcatcacacaggcgtttcaggggtcc
atgcgaatcttctcaaagaaacttccccatccagatctaccaccagaagagaaagaagct
cttctcttaaaagaggactttcaggaggtgatgtccgagtccactttcttgtacctgacc
ttggacctgcccaccgcacccctctacaaagatgagaaagaacagctcatcattcctcaa
gttcctctcttcaccatcctagccaagttcaatggaaacacagagaaagagtacaagaca
tacaaagagaactttctgaaaaaatttcagttgaccaagcttcccccgtacctcatcttc
tgtatcaaaaggttcacgaagaacaacttctttattgaaaagaaccccaccattgtcaac
tttccaatcaccaatgttgatttgcgtgagtatctgacggaagaggcccaggctactgag
aagatcacaacctatgacctggtggccaacgtagttcatgatggaaaaccaacagagggc
tcatatcgaattcacgttttgcatcatggaacagggaagtggtatgaacttcaggacttg
caggtgaccgatatcttgccccagatgattacgctttcagaagcatacatacagatttgg
aaaagacaagatatagatgaaggaagccatacaggggcatag
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