KEGG   Paramisgurnus dabryanus (large-scale loach): 135735587
Entry
135735587         CDS       T10799                                 
Symbol
cul4a
Name
(RefSeq) cullin-4A
  KO
K10609  cullin 4
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03420  Nucleotide excision repair
pdab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    135735587 (cul4a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    135735587 (cul4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pdab04121]
    135735587 (cul4a)
   03400 DNA repair and recombination proteins [BR:pdab03400]
    135735587 (cul4a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pdab04147]
    135735587 (cul4a)
Ubiquitin system [BR:pdab04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     135735587 (cul4a)
DNA repair and recombination proteins [BR:pdab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      135735587 (cul4a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      135735587 (cul4a)
Exosome [BR:pdab04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   135735587 (cul4a)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 135735587
NCBI-ProteinID: XP_073670481
LinkDB
Position
4:complement(30190354..30201378)
AA seq 742 aa
MMAEDLQKSNFNGLTKTTKSGSSKKLIIKNFKDRPKLTDSYTEDTWLKLRDAVGAIQSST
SIKYNLEELYQAVENLCSYKVSPILYKQLRQVCEEHVQAQIHQFREESLDNLSFLKKMNR
CWQDHCRQTIMIRSIFLFLDRTYVLQNALLPSIWDTGLELFRTHVVSDGCVQSRTVDGIL
EQIERERNGETVDRSLLRSLLGMLSDLQVYTESFEHRFLTETERLYAAEGQTLMQEREVS
EYLHHVARRLEEENDRVISYLDHSTQKPLISTVEKQLLGEHMNTILQKGLKTLLDENRVT
ELTLLYQLFSKVKGGLSVLLQFWRDYIKNFGGEIVSSPEKDKEMVQDLLDFKDKMDNVTQ
CCFQRNDTFINAMKEAFESFINKRPNKPAELIAKYVDSKLRAGNKEATEEELERILDKIM
IIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKD
MELSKDVMIQFKQYIQNQTDSSSIELTVNILTMGHWPTYTPMDVHLPTEMLKLQEVFKIF
YLGKHSGRKLQWQPTLGHAVLKTEFKEGKKELQVSLLQTLVLLMFNETDEVTVEEMQTAT
GIEDTELKRTLQSLACGKARVLNKTPRGKDVEDGDRFSFNSDFRHKLFRIKINQIQMKET
VEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQLKFPVKPADLKKRVE
SLIDRDYMERDKENPNQYHYVA
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgatggcggaagatcttcagaaatcaaactttaatggactcactaaaacaactaaaagc
ggatcgtctaagaaattgattattaaaaactttaaagacaggccgaagttgacagacagc
tacactgaagacacgtggctgaagcttcgagatgctgttggtgccattcagagcagcaca
tccatcaaatataaccttgaggaactttatcaggctgtggagaatctgtgttcatataaa
gtctcacccatcttatacaaacagttacgtcaagtttgtgaagagcacgttcaagctcag
atccatcagttcagagaagagtctctggataacctctcgttcctgaagaagatgaaccga
tgctggcaagaccactgcagacagacgatcatgattcgcagtattttcctgtttttggat
cggacgtatgtgcttcagaacgcacttcttccctccatctgggatacggggctggagttg
ttccggacacacgtcgtgagtgacggctgcgttcagagtcgcacggtggacggcatcctg
gagcagattgaacgcgagcgcaacggagagacggtggacaggagtctgctgcggagctta
ctgggcatgctctctgacctgcaggtgtatacggagtcttttgagcatcgttttctaacc
gagacggagcgtctgtacgccgctgagggtcaaacgctcatgcaggagagagaggtttca
gagtatctgcatcatgtggcacgacgactggaggaagagaatgatcgtgtcatcagttac
ttagatcacagcacacagaaacctctcatctctactgtggagaaacaactgttgggtgaa
cacatgaacaccatcctacagaaaggtctcaaaacactgttggatgagaaccgtgtgaca
gaattgactctgttgtatcagctcttcagtaaagtaaagggaggtctcagcgttctgttg
cagttctggagagactacataaagaactttggtggagagattgtgagttctccagagaaa
gataaagagatggttcaagatcttctggactttaaagataagatggacaatgtgacgcag
tgttgcttccagaggaacgacaccttcatcaatgctatgaaagaagccttcgaaagcttc
attaacaagagacccaacaaaccagctgagctcattgctaagtatgttgactctaaactc
cgtgctggaaacaaagaagccacagaagaagagctggagagaatcctggacaaaattatg
atcatattccgctttattcatggtaaagatgtgtttgaggctttctataagaaagatttg
gccaaacgtctgctggttgggaaaagcgcctcagtggatgctgagaagtccatgctgtcc
aaactcaaacacgagtgtggagcagcgttcaccagtaaacttgaaggcatgtttaaagac
atggagctctccaaagacgtcatgatccagtttaaacagtacattcagaaccagactgat
tccagcagcatcgagctgaccgtcaacattctgaccatgggtcactggcccacatacaca
ccaatggacgtccatctgcccacagagatgctgaagcttcaggaagtgtttaagatcttc
tatctggggaaacacagtgggcgtaaactacagtggcagcccacactgggtcatgcggtg
ctaaagactgagtttaaagagggtaagaaggagcttcaggtgtctctcctgcagactctt
gtcctgctgatgtttaatgagacggatgaagtgacagtggaggagatgcagacagccaca
ggcatcgaggacactgagctgaaacgcacacttcagtctctggcctgtgggaaagctcgc
gttcttaataaaactcctcgtgggaaagacgtagaggacggagatcgcttcagcttcaac
agcgacttcagacacaaactcttccgcatcaaaatcaatcagattcagatgaaggaaacg
gttgaggaacaggtcagcaccaccgagcgagtgtttcaggaccgtcagtatcagatcgat
gctgctgtggtccggatcatgaagatgagaaagaccttgagccacaatctcctcgtgtct
gaactctacaaccagctgaagttccctgtgaagcctgcagatctgaagaagcgtgtggag
tctctcatcgatcgggattatatggagcgggataaagaaaaccccaaccagtatcactat
gtggcttaa

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